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LOCUS NP_416736 1250 aa linear CON 09-MAR-2022 substr. MG1655]. ACCESSION NP_416736 VERSION NP_416736.1 DBLINK BioProject: PRJNA57779 BioSample: SAMN02604091 DBSOURCE REFSEQ: accession NC_000913.3 KEYWORDS RefSeq. SOURCE Escherichia coli str. K-12 substr. MG1655 ORGANISM Escherichia coli str. K-12 substr. MG1655 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (residues 1 to 1250) AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L. TITLE Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006) PUBMED 16397293 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 1250) AUTHORS Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T. TITLE Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 JOURNAL Mol. Syst. Biol. 2, 2006 (2006) PUBMED 16738553 REFERENCE 3 (residues 1 to 1250) AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y. TITLE The complete genome sequence of Escherichia coli K-12 JOURNAL Science 277 (5331), 1453-1462 (1997) PUBMED 9278503 REFERENCE 4 (residues 1 to 1250) AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L. TITLE Workshop on Annotation of Escherichia coli K-12 JOURNAL Unpublished REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections) REFERENCE 5 (residues 1 to 1250) AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H. TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56 JOURNAL Unpublished REMARK ASAP download 10 June 2004 (annotation updates) REFERENCE 6 (residues 1 to 1250) AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T. TITLE A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains JOURNAL Unpublished REMARK GenBank accessions AG613214 to AG613378 (sequence corrections) REFERENCE 7 (residues 1 to 1250) AUTHORS Perna,N.T. TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction JOURNAL Unpublished REMARK GenBank accession AY605712 (sequence corrections) REFERENCE 8 (residues 1 to 1250) AUTHORS Rudd,K.E. TITLE A manual approach to accurate translation start site annotation: an E. coli K-12 case study JOURNAL Unpublished REFERENCE 9 (residues 1 to 1250) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-MAR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 10 (residues 1 to 1250) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein update by submitter REFERENCE 11 (residues 1 to 1250) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein update by submitter REFERENCE 12 (residues 1 to 1250) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 13 (residues 1 to 1250) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Sequence update by submitter REFERENCE 14 (residues 1 to 1250) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Annotation update from ecogene.org as a multi-database collaboration REFERENCE 15 (residues 1 to 1250) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein updates by submitter REFERENCE 16 (residues 1 to 1250) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 17 (residues 1 to 1250) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 18 (residues 1 to 1250) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 19 (residues 1 to 1250) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAC75293. Changes to proteins and annotation made on March 7, 2022. Current U00096 annotation updates are derived from EcoCyc https://ecocyc.org/. Suggestions for updates can be sent to [email protected]. These updates are being generated from a collaboration that includes EcoCyc, the University of Wisconsin, UniProtKB/Swiss-Prot, and the National Center for Biotechnology Information (NCBI). COMPLETENESS: full length. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1250 /organism="Escherichia coli str. K-12 substr. MG1655" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:511145" Protein 1..1250 /product="putative autotransporter adhesin YfaL" /calculated_mol_wt=131022 Region 1..1250 /region_name="PRK09752" /note="AIDA-I family autotransporter YfaL" /db_xref="CDD:182059" CDS 1..1250 /gene="yfaL" /locus_tag="b2233" /gene_synonym="ECK2225; yfaF; yfaJ; yfaK" /coded_by="complement(NC_000913.3:2340417..2344169)" /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P45508" /db_xref="ASAP:ABE-0007377" /db_xref="ECOCYC:EG12850" /db_xref="GeneID:946595" CONTIG join(WP_001220077.1:1..1250) ORIGIN 1 mriiflrkey lsllpsmias lfsangvaav tdscqgydvk ascqasrqsl sgitqdwsia 61 dgqwlvfsdm tnnasggavf lqqgaefsll penetgmtlf anntvtgeyn nggaifaken 121 stlnltdvif sgnvaggygg aiyssgtndt gavdlrvtna mfrnniandg kggaiytinn 181 dvylsdvifd nnqaytstsy sdgdggaidv tdnnsdskhp sgytivnnta ftnntaegyg 241 gaiytnsvta pylidisvdd sysqnggvlv dennsaagyg dgpssaaggf mylglsevtf 301 diadgktlvi gntendgavd siagtglitk tgsgdlvlna dnndftgemq iengevtlgr 361 snslmnvgdt hcqddpqdcy gltigsidqy qnqaelnvgs tqqtfvhalt gfqngtlnid 421 aggnvtvnqg sfagiiegag qltiaqngsy vlagaqsmal tgdivvddga vlslegdaad 481 ltalqddpqs ivlnggvldl sdfstwqsgt syndglevsg ssgtvigsqd vvdlaggdnl 541 higgdgkdgv yvvvdasdgq vslannnsyl gttqiasgtl mvsdnsqlgd thynrqvift 601 dkqqesvmei tsdvdtrsda aghgrdiemr adgevavdag vdtqwgalma dssgqhqdeg 661 stltktgagt leltasgttq savrveegtl kgdvadilpy asslwvgdga tfvtgadqdi 721 qsidaissgt idisdgtvlr ltgqdtsval naslfngdgt lvnatdgvtl tgelntnlet 781 dsltylsnvt vngnltntsg avslqngvag dtltvngdyt gggtllldse lngddsvsdq 841 lvmngntagn ttvvvnsitg igeptstgik vvdfaadptq fqnnaqfsla gsgyvnmgay 901 dytlvednnd wylrsqevtp psppdpdptp dpdptpdpdp tpdpeptpay qpvlnakvgg 961 ylnnlraanq afmmerrdha ggdgqtlnlr viggdyhyta agqlaqhedt stvqlsgdlf 1021 sgrwgtdgew mlgivggysd nqgdsrsnmt gtradnqnhg yavgltsswf qhgnqkqgaw 1081 ldswlqyawf sndvseqedg tdhyhssgii asleagyqwl pgrgvviepq aqviyqgvqq 1141 ddftaanrar vsqsqgddiq trlglhsewr tavhviptld lnyyhdphst eieedgstis 1201 ddavkqrgei kvgvtgnisq rvslrgsvaw qkgsddfaqt agflsmtvkw