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LOCUS NP_416485 2358 aa linear CON 09-MAR-2022 MG1655]. ACCESSION NP_416485 VERSION NP_416485.4 DBLINK BioProject: PRJNA57779 BioSample: SAMN02604091 DBSOURCE REFSEQ: accession NC_000913.3 KEYWORDS RefSeq. SOURCE Escherichia coli str. K-12 substr. MG1655 ORGANISM Escherichia coli str. K-12 substr. MG1655 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (residues 1 to 2358) AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L. TITLE Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006) PUBMED 16397293 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 2358) AUTHORS Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T. TITLE Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 JOURNAL Mol. Syst. Biol. 2, 2006 (2006) PUBMED 16738553 REFERENCE 3 (residues 1 to 2358) AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y. TITLE The complete genome sequence of Escherichia coli K-12 JOURNAL Science 277 (5331), 1453-1462 (1997) PUBMED 9278503 REFERENCE 4 (residues 1 to 2358) AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L. TITLE Workshop on Annotation of Escherichia coli K-12 JOURNAL Unpublished REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections) REFERENCE 5 (residues 1 to 2358) AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H. TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56 JOURNAL Unpublished REMARK ASAP download 10 June 2004 (annotation updates) REFERENCE 6 (residues 1 to 2358) AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T. TITLE A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains JOURNAL Unpublished REMARK GenBank accessions AG613214 to AG613378 (sequence corrections) REFERENCE 7 (residues 1 to 2358) AUTHORS Perna,N.T. TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction JOURNAL Unpublished REMARK GenBank accession AY605712 (sequence corrections) REFERENCE 8 (residues 1 to 2358) AUTHORS Rudd,K.E. TITLE A manual approach to accurate translation start site annotation: an E. coli K-12 case study JOURNAL Unpublished REFERENCE 9 (residues 1 to 2358) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-MAR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 10 (residues 1 to 2358) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein update by submitter REFERENCE 11 (residues 1 to 2358) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein update by submitter REFERENCE 12 (residues 1 to 2358) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 13 (residues 1 to 2358) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Sequence update by submitter REFERENCE 14 (residues 1 to 2358) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Annotation update from ecogene.org as a multi-database collaboration REFERENCE 15 (residues 1 to 2358) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein updates by submitter REFERENCE 16 (residues 1 to 2358) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 17 (residues 1 to 2358) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 18 (residues 1 to 2358) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 19 (residues 1 to 2358) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAC75042. On Apr 24, 2007 this sequence version replaced NP_416485.3. Changes to proteins and annotation made on March 7, 2022. Current U00096 annotation updates are derived from EcoCyc https://ecocyc.org/. Suggestions for updates can be sent to [email protected]. These updates are being generated from a collaboration that includes EcoCyc, the University of Wisconsin, UniProtKB/Swiss-Prot, and the National Center for Biotechnology Information (NCBI). COMPLETENESS: full length. Method: conceptual translation. FEATURES Location/Qualifiers source 1..2358 /organism="Escherichia coli str. K-12 substr. MG1655" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:511145" Protein 1..2358 /product="inverse autotransporter adhesin" /calculated_mol_wt=248439 Region 1..1029 /region_name="Ve_IatC_Nterm" /note="inverse autotransporter adhesin IatC N-terminal domain; NF040978" /db_xref="CDD:468908" Region 1042..1136 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1146..1236 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1247..1347 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1358..1448 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1457..1551 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1560..1654 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1653..1752 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1764..1852 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1859..1948 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1960..2050 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" CDS 1..2358 /gene="yeeJ" /locus_tag="b1978" /gene_synonym="ECK1974" /coded_by="NC_000913.3:2044938..2052014" /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P76347" /db_xref="ASAP:ABE-0006563" /db_xref="ECOCYC:G7064" /db_xref="GeneID:946498" CONTIG join(WP_010723107.1:1..2358) ORIGIN 1 matkkrsgee indrqilcgm giklrrltag iclitqlafp maaaaqgvvn aatqqpvpaq 61 iaianantvp ytlgalesaq svaerfgisv aelrklnqfr tfargfdnvr qgdeldvpaq 121 vsekkltppp gnssdnleqq iastsqqigs llaedmnseq aanmargwas sqasgamtdw 181 lsrfgtarit lgvdedfslk nsqfdflhpw yetpdnlffs qhtlhrtder tqinnglgwr 241 hftptwmsgi nfffdhdlsr yhsragigae ywrdylklss ngylrltnwr sapeldndye 301 arpangwdvr aeswlpawph lggklvyeqy ygdevalfdk ddrqsnphai taglnytpfp 361 lmtfsaeqrq gkqgendtrf avdftwqpgs amqkqldpne vaarrslags rydlvdrnnn 421 ivleyrkkel vrltltdpvt gksgevkslv sslqtkyalk gynveatale aaggkvvttg 481 kdilvtlpay rftstpetdn twpievtaed vkgnlsnreq smvvvqaptl sqkdssvsls 541 tqtlnadshs tatltfiahd aagnpvvglv lstrhegvqd itlsdwkdng dgsytqiltt 601 gamsgtltlm pqlngvdaak apavvniisv sssrthssik idkdrylsgn pievtvelrd 661 endkpvkeqk qqlnnavsid nvkpgvttdw ketadgvyka tytaytkgsg ltakllmqnw 721 nedlhtagfi idanpqsaki atlsasnngv lanenaantv svnvadegsn pindhtvtfa 781 vlsgsatsfn nqntaktdvn glatfdlkss kqedntvevt lengvkqtli vsfvgdssta 841 qvdlqkskne vvadgndsvt mtatvrdakg nllndvmvtf nvnsaeakls qtevnshdgi 901 atatltslkn gdyrvtasvs sgsqanqqvn figdqstaal tlsvpsgdit vtntapqymt 961 atlqdkngnp lkdkeitfsv pndvaskfsi snggkgmtds ngvaiasltg tlagthmima 1021 rlansnvsda qpmtfvadkd ravvvlqtsk aeiigngvde ttltatvkdp snhpvagitv 1081 nftmpqdvaa nftlenngia itqangeahv tlkgkkagth tvtatlgnnn tsdsqpvtfv 1141 adkasaqvvl qiskdeitgn gvdsatltat vkdqfdnevn nlpvtfssas sgltltpgvs 1201 ntnesgiaqa tlagvafgek tvtaslanng asdnktvhfi gdtaaakiie lapvpdsiia 1261 gtpqnssgsv itatvvdnng fpvkgvtvnf tsnaataemt nggqavtneq gkatvtytnt 1321 rssiesgarp dtveasleng sstlstsinv nadastahlt llqalfdtvs agettslyie 1381 vkdnygngvp qqevtlsvsp segvtpsnna iyttnhdgnf yasftatkag vyqltatlen 1441 gdsmqqtvty vpnvanaeit laaskdpvia dnndlttlta tvadtegnai antevtftlp 1501 edvkanftls dggkvitdae gkakvtlkgt kagahtvtas mtggkseqlv vnfiadtlta 1561 qvnlnvtedn fiannvgmtr lqatvtdgng nplaneavtf tlpadvsasf tlgqggsait 1621 dingkaevtl sgtksgtypv tvsvnnygvs dtkqvtliad agtaklaslt svysfvvstt 1681 egatmtasvt dangnpvegi kvnfrgtsvt lsstsvetdd rgfaeilvts tevglktvsa 1741 sladkptevi srllnasadv nsatitslei pegqvmvaqd vavkahvndq fgnpvahqpv 1801 tfsaepssqm iisqntvstn tqgvaevtmt perngsymvk aslpngasle kqleaidekl 1861 tltassplig vyaptgatlt atltsangtp vegqvinfsv tpegatlsgg kvrtnssgqa 1921 pvvltsnkvg tytvtasfhn gvtiqtqttv kvtgnsstah vasfiadpst iaatntdlst 1981 lkatvedgsg nliegltvyf alksgsatlt sltavtdqng iattsvkgam tgsvtvsavt 2041 taggmqtvdi tlvagpadts qsvlksnrss lkgdytdsae lrlvlhdisg npikvsegme 2101 fvqsgtnvpy ikisaidysl ningdykatv tgggegiatl ipvlngvhqa glsttiqftr 2161 aedkimsgtv svngtdlptt tfpsqgftga yyqlnndnfa pgktaadyef sssaswvdvd 2221 atgkvtfknv gsnseritat pksggpsyvy eirvkswwvn ageafmiysl aenfcssngy 2281 tlpranylnh cssrgigsly sewgdmghyt tdagfqsnmy wssspansse qyvvslatgd 2341 qsvfeklgfa yatcyknl