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LOCUS NP_313317 1700 aa linear CON 12-FEB-2021 ACCESSION NP_313317 VERSION NP_313317.2 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 1700) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 1700) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB38713. On Aug 15, 2018 this sequence version replaced NP_313317.1. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1700 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..1700 /product="invasin" /calculated_mol_wt=183583 Region 22..921 /region_name="Ve_IatC_Nterm" /note="inverse autotransporter adhesin IatC N-terminal domain; NF040978" /db_xref="CDD:468908" Region 898..991 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1006..1089 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1102..1190 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1196..1286 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1298..1389 /region_name="BID_1" /note="Bacterial Ig-like domain (group 1); smart00634" /db_xref="CDD:214751" Region 1397..1486 /region_name="Invasin_D3" /note="Invasin, domain 3; pfam09134" /db_xref="CDD:430426" CDS 1..1700 /locus_tag="ECs_5290" /coded_by="complement(NC_002695.2:5416586..5421688)" /transl_table=11 /db_xref="GeneID:913650" CONTIG join(WP_023436697.1:1..1700) ORIGIN 1 mwymlnlrrq fhlpppllen ntvpytlgal esaqsvanrf gisleelrrl nqfrtfargf 61 dnvrqgeeld vpattsqksh eqqnavppan gentlenqia stsqrvgtll sqdmnseqas 121 gmargwasse asgamtdwln nfgtarislg vdedfslkns qfdflhpwyd tpdyllfsqh 181 tlhrtddrtq intglgwrhf tsswmsginl ffdhdlsryh sraglgaeyw rdylklssna 241 yigltgwrsa peldndfear pangwdlrae gwlpawpqlg gklvyeqyyg devalfdknd 301 rqsnphaita glnytpfpll tlsaeqrqgk qgendtrfav dltwqpsssm qkqlnpdeva 361 grrslagsry dlidrnnniv leyrkkelir lslldpvkgk sgeikplvss lqtkyalkgy 421 nieaaaleaa ggkvstsgkd itvtlpgyrf tntpetdntw sidvtaedvk gnlsrheqsm 481 vviqaptlsq kdsllsvnpl tvaadkkstt tltvtahdsd gtpvpglalq trsegvqdit 541 lsdwtdngdg sytqiltagt tsgsvtltpq ingesavkes ivvnivpvvs srdhssitid 601 nvsyyagddi kvrvelkdds nqpvayqkee lvkavtvens kpgativwhe eqpgvyaany 661 paykqgtalr aqlslhnwna plqshiynie anqnkarvat lsatnndvya dkktfntlti 721 nvtdesdnpl tnhqvtfkne kgsaefvepp qqntdaygva tinmvsqvae entisatlpn 781 gfsqriiakf vsdsstpkfk qlvadpdtii agnsqgstlt aiitdfhnnp lkdmkvnfva 841 pggsqldntt attdqsgivr vhltsskags ysvdaslevd knihqsvtit vvpnreqsvm 901 tlnagsgsai anntnivtlt asvkdvyghp lpdedvkftl pasmtgnftl ssetartdan 961 gdavvtlrgt kageftvtat ltrnntvayq qvtfigdtns aqlqpltasl nsivagnstg 1021 stltatilda yqnplkdqlv tfqsndvtls etevttntlg qatvtmtsni agqhnvvvsr 1081 kaqasdnktf slsvlpdess akvisitgae ktitvgenit lrilvqdafn nviagqrvrl 1141 saqpttniti gdtaytdnng yayvnllstq pgvyqvtatl dnnssskvdv nvangklelt 1201 sskpettvhn segitltata rnargelmpg qiitfsvtpe gatlsntgev ltdqsgqakv 1261 tltsdkvnvy tvtaimgkdv pvqsqvtvav kadaktahvv svvaspdtit adgidsstit 1321 srveddygfp vegvdishgl dtkgspvvni pttrtdqsgq vtatitstla etltvnvqvp 1381 gtanqsatit lvagtadesk silksdvdtl kadyqqsakl tltlqdkygn pivtsdhlef 1441 vqsgpfvnfl klsdidysqr nygeytvtvt ggkegtatli pmlngvhqan lsislnliqs 1501 ikemsghvta nnhtfstakf psegfagayy tlnndnfeag ktvddymfss sqgwvsvdas 1561 gkvsfanigd qtsvtisavp rqggttyqtl iklkgwwvnn gnhtniwlaa nalchakndg 1621 ynlpgithlt sgenkrtqgs lygewgnvga fssnsqftpg aywtsesddy srhyyvqmlt 1681 gmtgsdadss pqltacrksl