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LOCUS NP_313289 1644 aa linear CON 12-FEB-2021 Sakai]. ACCESSION NP_313289 VERSION NP_313289.1 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 1644) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 1644) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB38685. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1644 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..1644 /product="hypothetical protein" /calculated_mol_wt=188881 Region 543..>695 /region_name="HsdM" /note="Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]; COG0286" /db_xref="CDD:440055" CDS 1..1644 /locus_tag="ECs_5262" /coded_by="NC_002695.2:5376769..5381703" /transl_table=11 /db_xref="GeneID:913725" CONTIG join(WP_001229642.1:1..1644) ORIGIN 1 malvginnen efysnhylge vftsdirdvl epwiaqenaa reaeraareq gkdvepgyra 61 pwnqfnslat effrklaehe kqrqipqrla dqrnrwqpll kalgyeitpq iqmldddtpl 121 pvlarynstd gspwlwivea hdqeegtldp lalslltaqf padtdkhkhd slrkkangey 181 rswqdllsta vftqnepprf vlllgnrqll lldrtkwaqn rllrfdfeei lsrretdtlk 241 atavllhkds llpgsgapyl dslddnshkh afgvsedlky alresiellg neamhylidr 301 glanytgnra vdpdelsrec lrymyrllfl fyiearpelg yapmtaktyl qgysletlrd 361 lemipltsee drngryfhds lnmlfklvre gynggvkmqs dlesgdriti hshqfsvprl 421 eshlfdannt rilnrvvfrn etlqqiiqam slsrpakgrf nrrgrisyrq lginqlgavy 481 eallsyrgff asedlyevkk ageefnelet gyfvskdeis kyhedekvye kdgslrihrk 541 gsfiyrmagr dreksasyyt pevltrslvk yalkelfkeq idpisdphak adailnltvc 601 epamgsaafl neainqlaea ylfhkqqaeg rripqdrytq elqrvkmyia dnnvfgvdln 661 pvavelaevs lwlnaisgda fvpwfgyqlh cgnslvgarr qvfnkselty kkakdpswln 721 sepvelamnt preetqifhf llpdggmany sdktvkqryp ddfkaldswr kefiksfagh 781 eiadvqrise kvealwntyr qqlkaerlkt adsypvwpae nseqtrssls skdetfsgrl 841 ednsayqklr wvmdywcalw fwpidkadel pdrgtwlfei etlldgivit ekvtevaeht 901 tgdlfaeegl lreesslfsv agrlktevlf rhlprlaivd alrkqhrffh wdlefcdlfa 961 erggfdlmlg nppwlkvewq eagvlgdyep efvlrklsas klatlridtf nqipaleaaw 1021 rseyegcegm qnflnaqqny pvlrgvqtnl ykcflpqawr lgaqkgvagf lhpegiyddp 1081 kggqlraavy prlrahfqfq nelnlfvevd hhakfssniy saspstvgfe hisnlyapqt 1141 idacfehsgs gdipglkdei esegklkvvw ntsghrsrli siathelelf arlydsegtp 1201 awqarlpalh akqlvavlek fanqpnrlgd lqgqyfstvm fdetyaqrdg tilrqtqfpq 1261 dssqwvlsgp hffvgtpfyk tprenctlns dydcldlltl pddylprtny ipacdaqeya 1321 krtpcvtwte laedepkkvt dyyrlairam laqsgertli saiyppeish mnavrsycys 1381 sqnlllehsg mcfslpfdfi ckstgkanlh qmldgfsyvl fnprqkally clvlslnsvn 1441 dvyaglwqsc ytpdfntqrw srdlpqlpqd ffakltpewq rncalrsdys rrqalveidv 1501 lvaqalgltl eelltiyrvq fpvmrqyead twydqngrii ftpskglvgv glprtarkad 1561 lkngfvfnvd spewtggdct dqaigwddvk hlktgtvsvt fddytrsdeg errtvtwqap 1621 fikpdreddy kvawaffaqd kesa