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LOCUS NP_312507 1588 aa linear CON 12-FEB-2021 ACCESSION NP_312507 VERSION NP_312507.1 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 1588) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 1588) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB37903. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1588 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..1588 /product="adhesin" /calculated_mol_wt=160020 Region 1..50 /region_name="ESPR" /note="Extended Signal Peptide of Type V secretion system; pfam13018" /db_xref="CDD:463773" Region <37..>973 /region_name="auto_Ata" /note="trimeric autotransporter adhesin Ata; NF033481" /db_xref="CDD:411124" Region 699..1587 /region_name="Hia" /note="Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; COG5295" /db_xref="CDD:444098" CDS 1..1588 /locus_tag="ECs_4480" /coded_by="NC_002695.2:4519234..4524000" /transl_table=11 /db_xref="GeneID:915578" CONTIG join(WP_001033191.1:1..1588) ORIGIN 1 mnkifkviwn patgnytvts etaksrgkks grskllisal vaggmlssfg alanagndng 61 qgvdygsgsa gdgwvaigkg akantfmnts gsstavgyda iaegqyssai gskthaigga 121 smafgvsais egdrsialga ssyslgqysm algryskalg klsiamgdss kaeganaial 181 gnatkateim sialgdtana skaysmalga ssvaseenai aigaeteaae nataignnak 241 akgtnsmamg fgsladkvnt ialgngsqal adnaiaigqg nkadgvdaia lgngsqsrgl 301 ntialgtasn atgdkslalg snssangins valgadsiad ldntvsvgns slkrkivnvk 361 ngaiksdsyd aingsqlyai sdsvakrlgg gaavdvddgt vtaptynlkn gsknnvgaal 421 avldentlqw dqtkgkysaa hgtssptasv itdvadgtis asskdavngs qlkatnddve 481 antaniatnt sniatntani atnttnitnl tdsvgdlqad allwnetkka fsaahgqdtt 541 skitnvkdad ltadstdavn gsqlkttnda vatnttnian ntsniatntt nisnltetvt 601 nlgedalkwd kdngvftaah gtettskitn vkdgdlttgs tdavngsqlk ttndavatnt 661 tniatnttni snltetvtnl gedalkwdkd ngvftaahgn ntaskitnil dgtvtatssd 721 aingsqlydl ssniatyfgg nasvntdgvf tgptykiget nyynvgdala ainssfstsl 781 gdallwdata gkfsakhgtn gdasvitdva dgeisdsssd avngsqlhgv ssyvvdalgg 841 gaevnadgti taptytiana dydnvgdaln aidttlddal lwdadageng afsaahgkdk 901 tasvitnvan gaisaassda ingsqlyttn kyiadalggd aevnadgtit aptytianae 961 ynnvgdalda lddnallwde tanggagayn ashdgkasii tnvangsise dstdavngsq 1021 lnatnmmieq ntqiinqlag ntdatyiqen gaginyvrtn ddglafndas aqgvgataig 1081 ynsvakgdss vaigqgsysd vdtgialgss svssrviakg srdtsiteng vvigydttdg 1141 ellgalsigd dgkyrqiinv adgseahdav tvrqlqnaig avattptkyf hansteedsl 1201 avgtdslamg aktivngdkg igigygayvd analngiaig snaqvihvns iaigngsttt 1261 rgaqtnytay nmdapqnsvg efsvgsadgq rqitnvaags adtdavnvgq lkvtdaqvsq 1321 ntqsitnldn rvtnldsrvt niengigdiv ttgstkyfkt ntdgvdasaq gkdsvaigsg 1381 siaaadnsva lgtgsvatee ntisvgsstn qrritnvaag knatdavnva qlksseaggv 1441 rydtkadgsi dysnitlggg nggttrisnv sagvnnndvv nyaqlkqsvq etkqytdqrm 1501 vemdnklskt esklsggias amamtglpqa ytpgasmasi gggtyngesa valgvsmvsa 1561 ngrwvyklqg stnsqgeysa algagiqw