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LOCUS NP_311542 1528 aa linear CON 12-FEB-2021 ACCESSION NP_311542 VERSION NP_311542.2 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 1528) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 1528) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB36938. On Jan 24, 2017 this sequence version replaced NP_311542.1. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1528 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..1528 /product="adhesin autotransporter" /calculated_mol_wt=157445 Region 46..>652 /region_name="auto_AIDA-I" /note="autotransporter adhesin AIDA-I; NF033176" /db_xref="CDD:380183" Region 764..>804 /region_name="AIDA" /note="Adhesin of bacterial autotransporter system, probable stalk; pfam16168" /db_xref="CDD:406554" Region 821..872 /region_name="AIDA" /note="Adhesin of bacterial autotransporter system, probable stalk; pfam16168" /db_xref="CDD:406554" Region 892..946 /region_name="AIDA" /note="Adhesin of bacterial autotransporter system, probable stalk; pfam16168" /db_xref="CDD:406554" Region 931..1182 /region_name="PL1_Passenger_AT" /note="Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases; cd01343" /db_xref="CDD:238653" Region 1079..1528 /region_name="autotrans_barl" /note="outer membrane autotransporter barrel domain; TIGR01414" /db_xref="CDD:273608" CDS 1..1528 /gene="ypjA" /locus_tag="ECs_3515" /coded_by="complement(NC_002695.2:3500451..3505037)" /transl_table=11 /db_xref="GeneID:914770" CONTIG join(WP_012779382.1:1..1528) ORIGIN 1 mnrtspyycr rsvlsllisa liyappgmaa ftpdvigvvn detvdgsqrv dergttnnth 61 iinhgqqnvy ggvsngslie sggyqdvgrh nnyvgqsnnt tinggrqsih dggistgtii 121 esgnqdvykg gisngttikg gasrveggsa ngtlidggsq ivkvqghadg ttinksgsqd 181 vvqgslatnt tinggrqyve qstvetttik nggeqrvyes raldttiegg tqslnsksta 241 kntqiysggt qiidntsssd vievysggvl dvsggtatnv tqhdgailkt ntngttvsgt 301 nsegafsihn hvadnvllen gghldinayg sanktiikdk gtmsvltnak adatridngg 361 vmdvagnatn tiinggtqni nnygiatgtn insgtqniks ggkadttiis sgsrqvvekd 421 gtaigsnisa ggslivytgg iahgvnqetg salvantgag tdiegynkls hftitggean 481 yvvlentgel tvvaktsakn ttidaggkli vqkeaktdst rlnnggvlev qdggeakhve 541 qqsggalias ttsgtliegt nsygdafyir nseaknvvle nagsltvvtg sravdtiina 601 ngkmdvygkd vgtvlnsagt qtiyasatsd kanikggkqt vyglateani esgeqivdgg 661 stekthingg tqtvqnygka intdivsglq qimangtaeg siinggsqiv negglaensv 721 lndggtldvr ekgsatgiqq ssqgalvatt ratrvtgtra dgvafsieqg aannillang 781 gvltvesdts sdktqvntgg reivktkata tgttltggeq ivegvanett indggiqtvs 841 angeaiktti neggtltvnd ngkatdivqn sgaalqtsta ngieisgthq ygtfsisgnl 901 atnmllengg nllvlagtea rdstvgkgga mqnqgqdsat kvnsggqytl grskdefqal 961 araedlqvag gtaivyagtl adasvsgatg slslmtprdn vtpvklegai ritdsatlti 1021 gngvdttlad ltaasrgsvw lnsnnscagt snceyrvnsl llndgnvyls aqtaapattn 1081 giyntlttne lsgsgnfylh tnvagsrgdq lvvnnnatgn fkifvqdtgv spqsddamtl 1141 vktgggdasf slgntggfvd lgtyeyvlks dgnsnwnltn dvkpnpdpnp npnpnpkpdp 1201 kpdpkpdpkp dptpeptptp vpekritpst aavlnmaatl plvfdaelns irerlnimka 1261 sphnnnvwga tyntrnnvtt dagagfeqtl tgmtvgidsp ndipegiatl gafmgyshsh 1321 igfdrgghgs vgsyslggya swehesgfyl dgvvklnrfe snvagkmssg gaangsyhsn 1381 glgghietgm rftdgnwnlt pyasltgfta dnpeyhlsng mesksvdtrs iyrelgatls 1441 ynmrlgngme iepwlkaavr kefvddnrvk vnndgnfvnd lsgrrgiyqa gikasfsstl 1501 sghlgvgysh gagvespwna vagvnwsf