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LOCUS NP_309833 1158 aa linear CON 12-FEB-2021 Sakai]. ACCESSION NP_309833 VERSION NP_309833.1 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 1158) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 1158) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB35229. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1158 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..1158 /product="phage host specificity protein" /calculated_mol_wt=126683 Region 216..1009 /region_name="COG4733" /note="Phage-related protein, tail protein J [Mobilome: prophages, transposons]" /db_xref="CDD:443767" Region 976..1116 /region_name="DUF3672" /note="Fibronectin type III protein; pfam12421" /db_xref="CDD:289206" CDS 1..1158 /locus_tag="ECs_1806" /coded_by="NC_002695.2:1794772..1798248" /transl_table=11 /db_xref="GeneID:912919" CONTIG join(WP_000514792.1:1..1158) ORIGIN 1 mgkgggkaht pveakdnlks tqmmsvidai gegpiegpvk glqsilvnkt pltdtdgnpv 61 ihgvtavwra geqeqtppeg fessgaetal gvevtkakpv trtitsanid rlrvtfgvqs 121 llettskgdr nhssvrlliq lqrngnwvte kdvtingktt sqflasvild nlpprpfnir 181 mvretadstt dqlqnrtlws syteiidvkq cypntaivgl qvdaeqfggq qmtvnyhirg 241 riiqvpsnyd pekrtysgiw dgslkpaysn npawclwdml thprygmgkr lgaadvdkwa 301 lyaiaqycdq tvpdgfggte prmtfnayls qqrkawdvls dfcsamrcmp vwngqtltfv 361 qdrpsdvvwp ytssdvvvdd ngvgfrysfs alkdrhtave vnytdpqngw qtstelvedp 421 eailrygrnl lkmdafgcts rgqahraglw viktglletq tvdftlgsqg lrhtpgdiie 481 icdndyagtm tggrilsida asrtltldre vtlpetgaat vnlingsgkp vsvaitahpa 541 pdriqvstlp dgvetygvwg lslpslrrrl frcvsvrent dgtfaitavq hvpekeaivd 601 ngarfepqsg tlnsvippav qhltvevsaa dgqylaqakw dtpkvvkgvs fmlrltvaad 661 dgserlvsta rttettyrft qlapgnyrlt vravnawgqq gdpasvsfri aapaapsqie 721 ltpgyfqita vprlavydpt vqfefwfset ritdirqvet tarylgtgly wiaasinikp 781 ghdyyfyirs vntvgksafv eavgqpsdda sgyldffkge igkthlaqel wtqidngqla 841 pdlaeirtsi tdvsneitqt vnkkledqsa aiqqiqkvqv dtnnnlnsmw avklqqmqdg 901 rlyiagigag ientsdgmqs qvllaadria minpangntk pmfvgqgdqi fmnevflkyl 961 taptitsggn ppafsltpdg rltaknadis gnvnansgtl nnvtinencr vlgklsanqi 1021 egdlvktvgk afprdsrape rwpsgtitvr vyddqpfdrq ivipavafsg akhekehtdi 1081 ysscrlivrk ngaeiynrta ldntliysgv idmpaghghm tlefsvsawl vnnwyptasi 1141 sdllvvvmkk atagitis