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LOCUS NP_309309 1270 aa linear CON 12-FEB-2021 str. Sakai]. ACCESSION NP_309309 VERSION NP_309309.2 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 1270) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 1270) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB34705. On Aug 15, 2018 this sequence version replaced NP_309309.1. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1270 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..1270 /product="hemagglutinin/hemolysin-related protein" /calculated_mol_wt=130416 Region 30..>1269 /region_name="FhaB" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; COG3210" /db_xref="CDD:442443" Region 45..282 /region_name="TPS" /note="TPS secretion domain; pfam05860" /db_xref="CDD:461762" Region 287..306 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 308..329 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 331..349 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 351..371 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 374..394 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 396..413 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 415..434 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 436..455 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 464..482 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 484..508 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 510..528 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 530..549 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 554..570 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 572..590 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 592..611 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 631..649 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 651..671 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 673..692 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 694..722 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 724..742 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 744..763 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 766..783 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 787..805 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 808..824 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 826..864 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 866..885 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 887..906 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 908..927 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 929..947 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 950..968 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 970..989 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 991..1027 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1029..1049 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1051..1069 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1072..1090 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1102..1120 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1122..1142 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1143..1161 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1163..1182 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1184..1202 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" Region 1204..1222 /region_name="FHA beta-helical repeat" /note="FHA beta-helical repeat [structural motif]" /db_xref="CDD:293785" CDS 1..1270 /locus_tag="ECs_1282" /coded_by="NC_002695.2:1350076..1353888" /transl_table=11 /db_xref="GeneID:912619" CONTIG join(WP_001240839.1:1..1270) ORIGIN 1 maminlskea tvgkaltpia ilmmlsfpva sqaaglvikn gtvynangvp vvdinkpngs 61 glshniwdnl nvdkngvvfn nsanesstsl agniqgnsnl tsgsakviln evtsknpsti 121 ngmmevagdk adliianpng itvngggsin tgkltlttgt pdiqddklag ysvnggtitl 181 gkldnaspte ilsrnvvvng kvsadelnvv agnnyvnaag qvtgsvsatg srngysvdva 241 klggmyanki slvstekgvg vrnlgviagg vngvsidskg nllnsnaqiq sastinlttn 301 gtldnttgtv tsvgtislnt nkntivntra gnistmgdiy vnsgtidntn gklaaagmla 361 vdtnnatlin sgkgssvgie aglvalktgt lnnsngqirg gyvglesaal nnnngdiqtt 421 gdiaiisngn vdnnkglirs stghivigaa gsvnngstkt adtgssdslg iiadtgveig 481 anninnnggq iasngnvsls systiddyag kilsnskvii kgsslrndtg gisgkqgiev 541 avggsltnni gvisseegdi sllansvdnh ggfmmgqnit mesmsgvnnn talivaskkl 601 kinargsien rdgnnfgnay glyfgmpqqt ggmvgkegie lsgqniynnn srliaedgpl 661 tlqaqntfdn tralvtsgad asiqvggtyy nnyattwsag nldidattlq nsssgtmidn 721 natgfiasdk nlslevvnsl tnygwisgkg dvdvtvnngn lynrntiaae kgldiaalng 781 ienwkdisag gdltmntnrh vtnnsnsnmv gqnivinavn dinnrgnivs dadlnvttkg 841 nlynylymvg ygdialsans vannnatiea tgdliidskg nvgnnrgnlh alngvlsvkg 901 nnlnndngei rgygdvtlal tgnydsykgs ltsetgdvtl tanivdnayg liagenvsvd 961 akstiynnta liaankklvi naggnlenrd gnnflrnnga lfgitdnvgg ivgkegvtls 1021 aqnvynnnss iiaengplnl lsrgtldntr allssgadai iraagtfynn yattysagnl 1081 dvyaaslnna sdgrlednta tgviasdknl dlsvdnsvtn ygwisgkgdv hfnvlkgtly 1141 nrnaiaadna ltinalngve nfkdivagta ltidtqkyvt nnsnsnmlgq tiainavndi 1201 nnrgnivgdy slgvkttgni ynylnmlsyg vagvsankvt nsgkdavlgg fyglaleane 1261 tdntgtivgm