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LOCUS NP_309269 2793 aa linear CON 12-FEB-2021 Sakai]. ACCESSION NP_309269 VERSION NP_309269.1 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 2793) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 2793) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB34665. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..2793 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..2793 /product="hypothetical protein" /calculated_mol_wt=308192 Region 1050..1200 /region_name="LPD5" /note="Large polyvalent protein-associated domain 5; pfam18799" /db_xref="CDD:436746" Region 1361..1441 /region_name="LPD1" /note="Large polyvalent protein-associated domain 1; pfam18796" /db_xref="CDD:465869" Region 1751..1837 /region_name="MuF_C" /note="Phage MuF-C-terminal domain; pfam18819" /db_xref="CDD:436762" Region 2476..2681 /region_name="LPD38" /note="Large polyvalent protein associated domain 38; pfam18857" /db_xref="CDD:465888" CDS 1..2793 /locus_tag="ECs_1242" /coded_by="NC_002695.2:1296023..1304404" /transl_table=11 /db_xref="GeneID:912529" CONTIG join(WP_000331690.1:1..2793) ORIGIN 1 mayseeqrpe aqlgnqnrns lniqqpgetd syeaffsdpn rwkdnstsfs lgdvlptmgk 61 gfaqsvrgtg emarglgdam iqspvktgar ilnefsrmgl pgvatvqdif aggsrgadev 121 idtlpdgkna vtdtvgkglk atgkavsdga katdewltgk mspgavraln tpmtegynds 181 avwvakgvnl igalvpdmva ggvarkvgdv tlrkmltagl ekkyiaagmq peratalaae 241 avdkkmpdlf qaglithstv saqgqsamaa adavlnadys elaqspkfqq tflsidadpq 301 haqltdrqkm dlakervade vraqlatdpe llavnamaak lgdaqlfnlv trgtaktvks 361 givrnateqg ainaaqggys ryqentalre tagmgvspwe gvadatiega afgaamgapf 421 gavagyrgrr qaaeetamrd aetvqqddaa pqpesvdpva qqresmqgmn reqlleqyad 481 admategdas aahrreaasq llneldeqtk rqavmnelka kprselleey rrlsqkegrt 541 eteeqqfqai revirpqqev tpeaqsqpen aedgngsiyp tvrfrdpnev rieingngas 601 rpaeriekvr pdnryftdek samgsdvfrn aaatglkpsv vkkgenqyav emdnpafsed 661 vatetintla dgeriadadp meqpafmrdp rfrgftgddt evqarlargn aptaeelvrs 721 qmaegdagpt aqelterprl papgdihpgq gyplpgevar tpdenqagrg grftttgevk 781 gqsfqkgqap apenaagrqg etlegdmvrr glpspdaqna tapvreglpa pdiarnvrmp 841 qpeslprtvr dslpelaqqa evrrqaggnr dipqpetiap esettvstdr eatvrggevr 901 gkkiedfgee ikgaakhrya qlaetlgktl edrdyatqpl sklfpkpdya klanegadad 961 tlamialyrs dipaktkhnt agwgesikkv rhsvsemlng tvsakrlaew megrmpsrya 1021 dtwqllrtlp psqmdrasay rvvsgvyqaa ggkrydppqk lyslrnkdnk gsnlffsesr 1081 dellakakvw faeqeeksqa kgdektapsp ddkirfdvyr ntrsgdifia ygknkmrvrg 1141 gfksasdark yidshrdelv rhvkemreis reeqrnatnr drtgperrkg nvspeqfsda 1201 fgfrgvqfgn yvegprrqad lnraydslhd laevlnvptk alslngrlgl afgargkgka 1261 aahyesgeva inltkgngpg alahewfhsl dnyfgrydvs ndgkitsggd fmteaqrvrr 1321 ifkdgryvda eypvrqevyd afkgviqaik nsdmprrsal ldevrskpyw stdvemaara 1381 feryvqdkar magvendylv nirkapehnt dntyayptna eldggireaf dhlfrtlktr 1441 etdkgvafys rkgvtrtpeg nlisdvnrsa eakgspvpqv eavargvmsg ikdsdlkvrv 1501 vksqkeaeal agelfdgygr vhafyrpdkr eivlvadnip dgrtvreklr heiihhameh 1561 vvtpaeyqti iktvlktrds dnvtireawr kvdasygkes pevqagefla hmaekqpnkf 1621 vaawervval vkgvlrrtgl lkptelndir lvretirtlg qrvregytpr edgagasfqy 1681 srsgkrdpfk vpegegeryr ddlarmmksl rttdltvnig rtppvlrhlg apdlplvisr 1741 dtvrkatngv khvvpmdvie rlpelmhdpd aiyrsatern avvmlldavd kngdpvvsav 1801 hmkavrsrle inkvasvygt engkklksme mtgltlyrre klsrdnllhr glqlpkgehs 1861 yrgsadkily pedirkgpyy srtssltpee tiasrfvrqm qdkfqvlkav qenirktggk 1921 vddsnnayma eelfhgkaen dlnvmkeryv qplakllady kiaqadldey lyarhapern 1981 ahiakinpkm pdggsgmtna eaaeimqrvr nsgkqaqydr lagiiddmla rrrelireag 2041 leengvvdaw qnayryyvpl kgqdvdgvvs lprtgkgfti ggresrqamg rasraqspst 2101 qaiqdlsesl irhrknevgn aflklvqdnp dkdywqvftd drpdtmrtia erkdqetget 2161 irevverpvp mammadryft tkkngktyyi klhdprlmra mksmgpetsn afvrtlgkvn 2221 rflatvntsy npeflvsnfi rdvqtavmnl kaeqgrsdgk lkgldnlsal avvkdsrsam 2281 savyaslrgk tltgkgaqwq kvwkefvedg gktgwfnmgd legqqkemdr lvslakggwk 2341 gqsigawnsf lnlvedanga venalrlsay khardaglsr qqaaslaknm tvnfnrrgeq 2401 galmnslymf anasiqgtan lvrtlghlng egpllerlrw knlnvpqkia laavgagyll 2461 gslnrsvage dddgvnwydk vpshvkernl vimksvfggk ageywsiplp ygynvffllg 2521 htaegvaagd ltasraagnv vggvlgafsp igsetsetls gallknaapt ilrpfanlam 2581 nenfmgaqiy qenmpfgtpk pdsqlgrrst peaykafasw lnafsggsqy rpgavditpe 2641 slkfwidyis ggtgrfiskt tdaavkslng idipeqqvpf lgkisgevmp yadqqkmydr 2701 mteiaqyhae lksltgaert afidenngkl smnglmqdtr krlkdlrkqr daiyadstls 2761 laqqsamvks verdmkiavd rfnreynkkv gvd