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LOCUS NP_308569 5291 aa linear CON 12-FEB-2021 Sakai]. ACCESSION NP_308569 VERSION NP_308569.1 DBLINK BioProject: PRJNA226 BioSample: SAMN01911278 DBSOURCE REFSEQ: accession NC_002695.2 KEYWORDS RefSeq. SOURCE Escherichia coli O157:H7 str. Sakai ORGANISM Escherichia coli O157:H7 str. Sakai Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H. TITLE Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 JOURNAL DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96] REFERENCE 2 AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak JOURNAL Gene 258 (1-2), 127-139 (2000) PUBMED 11111050 REFERENCE 3 AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T. TITLE Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008 REFERENCE 4 AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H. TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605 REFERENCE 5 (residues 1 to 5291) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 6 (residues 1 to 5291) AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M. TITLE Direct Submission JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University; 31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to BAB33965. On May 10, 2018 this sequence version replased gi: 47118301 This update is obtained as follows: the Sakai genome was resequenced by illumina MiSeq and PacBio RS II sequencers and 78 sites of single base error, 11 sites of insertion (10 one-base insertions and a 141-base insertion) and 16 sites of deletion (14 one-base deletions, a three-base deletion and a six-base deletion) were corrected. Annotation was performed using DFAST auto-annotation system with manual curation. This work was done in collaboration with Tetsuya Hayashi, Makoto Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino, Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda, Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe, Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine Science and Technology Center), Naotake Ogasawara (Nara Institute of Science and Technology), Satoru Kuhara (Kuyshu University), and supported by the Research for the Future Program of the Japan Society for the Promotion of Science. Method: conceptual translation. FEATURES Location/Qualifiers source 1..5291 /organism="Escherichia coli O157:H7 str. Sakai" /strain="Sakai" /sub_strain="RIMD 0509952" /serovar="O157:H7" /db_xref="taxon:386585" Protein 1..5291 /product="hypothetical protein" /calculated_mol_wt=525696 Region 31..128 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 131..228 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 231..328 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 331..427 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 431..527 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 530..625 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 629..726 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 729..826 /region_name="Ca_tandemer" /note="Ca2+-stabilized adhesin repeat; NF033510" /db_xref="CDD:411149" Region 809..2507 /region_name="FhaB" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; COG3210" /db_xref="CDD:442443" Region 1846..3535 /region_name="FhaB" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; COG3210" /db_xref="CDD:442443" Region 2804..4494 /region_name="FhaB" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; COG3210" /db_xref="CDD:442443" Region 3737..5285 /region_name="FhaB" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; COG3210" /db_xref="CDD:442443" CDS 1..5291 /locus_tag="ECs_0542" /coded_by="NC_002695.2:585947..601822" /transl_table=11 /db_xref="GeneID:914929" CONTIG join(WP_001111655.1:1..5291) ORIGIN 1 mpasavgalg easytvtanv tdsagnsnsa shnvqvntal pgvtinpvat ddiinaaesg 61 naqtisgqvt gaaagdtvtv tlggktytat vqgnlswsvd vpaadiqaig ngnltvnasv 121 tngvgntgsg srditidanl pglrvdtvag ddvvnsieha qalvitgsss glaagaaltv 181 vintvtyaat vladgtwsvg vpaadvsnwp agtvnitvsg tntagttsti thpvtvdlaa 241 vaisintvsg ddvinaaekg adltlsgsts gvevgqtvtv tfggktytat vagdgswttt 301 vpaadlsvlr dgdatvqasv stingntasa thaysvdata ptlaintiat ddilnaaeag 361 npltisgsst aeagqtvtvt lngvtysgsv qadgswsvsl ptadlsnlta sqytvsasvs 421 dkagnpasan hglavdltvp vltintvsgd diinaaehgq alvisgsstg geagdvitvt 481 lnsktyttml dasgnwsvgv paadvtalgs gpqtitaait daagnsddas rtvtvnlaap 541 tigintiatd dvikatekga dlqitgtsnq pagttitvtl ngqnytattd sngnwsatvp 601 asavsalgea nytvtanvtd tagnsnsash nvlvnsalpa vtinavatdd iinaaesgna 661 qtisgqvtga aqgdtvtvtl ggntytatvq snlswsvdvp aadiqalgng dltvnasvtn 721 gvgntgsgsr ditidanlpg lrvdtvagdd vinsiehnqa lvitgsssgl tagtaltvei 781 nnvtygatvl adgtwslgvp avdvsnwpag tvnitvsgtn sagttstith pvtvdlagva 841 itintlsgdd vinavekget lvvsgstsgv eagqtvtvtf ggknytttve angswtvnvp 901 padlaalpdg agnvqasvsn ingnsaqadr aysvdatapl vtintiasdd ilnvseagag 961 itisgtttaq agqtltvtln nntyqttvla dgtwsvnvpa adlsgltass ytvtatvsdk 1021 agnpasadha lvvditapdl tintvagddi inaiehgqal vvsgtstgaa agdvvtvtln 1081 gknytttlda sgnwsvgipa advtalatgs qtitaslsdr agnsdstthd vtvdlsgptl 1141 tintvsgddi inaaeivvaq tisgqvtgta vagntvivti ggnqynatvq sdlswsvsvp 1201 anvlqalgng eltisasltn sanntgtath dividanlpg lrvdtvagdd vinsiehtqa 1261 lvitgsssgl aagaaltvvi nsvtygatvl adgswsvgvp vadvtnwpag tvniavsgtn 1321 tagtttsish pvtvdlaava itintlstdd vinaaekgsd lqlsgttsgv eagqtitvif 1381 ggksytttva adntwgltip avdvatlpdg aanvqasvsn vagnstqath aysvdataps 1441 vtintiatdd ilnaaeagsa ltisgtstae agqtvtvtln gvnysgnvqa dgswsvsvpt 1501 gdlasltass ytvnasvsdk arnsasathn ltvdlaapvv tintvagddi inatehgqaq 1561 iisgsatgat tgntvsvtig tttyttvlda ngnwsigvpa svisalaqgd vtitatvtds 1621 agnsgtasht vtvalgapvl aintiavddi inaaekgadl aitgtsnqpa gtqitvtlng 1681 qnytttadas gnwsvtvpas rvsalgeaty tvtaaatdad gnsgsashnv qvntalpgvt 1741 invvatddii naaeagveqt isgqvtgaaa gdtvtvtlgg atytatvqan lswsvdvpas 1801 alqelgngel tisasvtnsv gntgngtrei tidanlpglr vdtvagddvv niiehgqalv 1861 itgsssglaa gsnvtlting qtyvaavlad gtwsvgvpav dvsawpagsv tiaasgstsa 1921 gnpvsvthpv tvdlsavavs inaitaddvi naaekgaalt lsgstsgvea gqtvtvtfgg 1981 ktysatvaan gswstsvpaa dmaalrdgda saqasvsnvn gnsattthay svdasaptvt 2041 intiagddil naaeagaalt itgsstaeag qtvtvtlngt nytgtvqtdg swsvsvpsad 2101 lstltasnyt vnaavsdkag npasvnhnlt vdtsvpvvti ntvagddvin atehaqaqii 2161 sgsatgaatg stvtvtigtn tfttvldasg nwsvgvpasv vsalangtvt inasvtdagg 2221 nsgsathqvt vntglptitf naisgdniln adekgqplti sggstglatg aqvtvtlngh 2281 nysattdasg nwtltvpvsd laalgqanyt vsasatsaag ntassqanll vdsglpdvti 2341 ntvagddiin aaeagadqti sgvvtraaag dtvtvtlggn tytatvqsnl swsvsvptad 2401 lqalgngdlt itasvtnang ntgsgtrdit idanlpglrv dtvagddivn siehgqalvi 2461 tggssglnag avltvtinsv aysatvqadg swsvgipaan vsawpagplt vevdgqssan 2521 npvsvshpft vdltavaisi ntvasddvin aaekgtnltl sgstsgiesg qtvtvtfggk 2581 tytasvaang swsvnvpaad latlpegaan vqasvssasg nsasathays vdasaptlti 2641 ntiasddiln aaeagsplti sgtstaetgq tvtvtlngat ytgtvqadgs wsvsvptsal 2701 galnasnytv satvndkagn pgsashnlav dttapvltin tvagddiind aehaqalvis 2761 gtssggeagd vvsvvlngkt ytttldasgn wsvgvpaadv talgsgaqti tasvsdragn 2821 sddasrtvtv slsapvisin tiagddvina tekgsdlals gtsdqpagta itvtlngqny 2881 sattdasgnw svtvpasavs algeatysvt asvtnaqgns stashnvqvn talpgitinp 2941 vatddiinas eagsaqtisg qvtgaaagst vtvelggkty tatvqadlsw nvsvpaadwq 3001 algngeltvn asvtnavgnt gsgtrditid aslpglrvdt vagddvvnii ehaqaqvitg 3061 sssgfaagta ltvvinnqty aatvlangsw svgvpatdvs nwpagtlnit vsgansagtq 3121 tsithpltvd ltavaismns itsddainaa ekgaaltlsg stsgveagqt vtvtfggkty 3181 tttvaangsw sttvpaadla alrdgdasaq vrvtnvngns atatheysvd saaptvtint 3241 iasdniinas eaaagvtvsg tstaqtgqtl tvtlngtnyq ttvqtdgsws ltlpasdlta 3301 lanngytlta tvsdlagnlg saskgvtvdt tapvisfntv agddvinnve hiqaqiisgt 3361 atgavagdrl vvtiagqqyv tstdasgnws vgvpasvisg ladgtvtisa titdsagnss 3421 tqthnvqvnt aavslsvsti sgdnlinaae agsaltlsgt gtnfatgtvv tvllngkgys 3481 atiqsngsws vnvpaadvaa lsdgtsytvs asaqdsagng nsstqthnvq vntaavslsv 3541 stisgdnlin aaeagsaltl sgtgtnfatg tvvtvllngk gysatiqsng swsvnvpaad 3601 vaalsdgtsy tvsasaqdsa gnsatasrsv avdltapvis intvstddrl naaeqqqplt 3661 lngstsaevg qtvtvtfggk tytatvaang twalnvpavd laalgqgaqt itasvndrag 3721 npgqathalt vdtvaptvti atvagddiin naeqlagqti sgtttaevgq tvtvtfngqt 3781 wsatvgsggs wsvfipaqqf aglsdgsyti satvsdqagn pgsasrgvtl ngdvptvtin 3841 tfagddvvna aehgsslvis gtttapvgqt ltltlngkty tttvqtggsw sytlgsadvt 3901 aladgnayvi nasvsnaign tgssnhtitv dlsapamgin idslqadtgl sasdfitsvs 3961 pvvvngslta alasnetaqi sidggttwtt ltvtgttwry ndsrtltdgn ylyqvrvida 4021 agnvgatdsq nvvidttapd pavktiaisa ittdmglitn dfvtsdttla vsgtlgatls 4081 agefaqisld ggvtwttltv vgtswsyadg htltdgtwny tvrvvdlagn vgqtatqnvv 4141 vdttspeaak sititgisdd tgtsssdfit sdttltvrgv lgaalganef aqistdngat 4201 wvnvtvaads lnwsyvdgrt ltngtttwqv rvvdlagnvg atssqsalid tvnpaqvlti 4261 asistdtgss atdfitsdtm ltltgslgag lasgevaqis ldsgatwttl ttngtqwtyt 4321 dsrtltdgsy vyqvrvldla gntgpvvskt vvvdtinpta tptivsytdd vgqrqgtlss 4381 sqatddttpl lngvlsapla sgevvylyrn glllgavtmv galnwtysds glvsgaytys 4441 arvvdlagni tsssdfvltv dtsipttlaq itsqttrdtt piisgvitaa lasgqyvevv 4501 ingktytsep ggavvvdpah ntwyvqlpdt daltvsatay tvtaqvkssa gngnnanisn 4561 gtvtvnaaid ytptwttask ttawgltygl dshgmwtvla nqqvmqstdp ltwsktaltl 4621 yqsgnnyats siadydrngt gdlfitrddy gtgyingftn ngdgtfssai qvtvgtltwy 4681 gsivafdkeg dgyldfwigd aggpdsntfl wnnagtlvgn sttsnsggsa tvggavtgyl 4741 slnegsgvdl nndgridlvq htynlnnyyt lsslinqgng tfvwgqnttn tflsgagsga 4801 msssvsmtwa dfdgdgdmdl flpasqgran ygsllfntng vlgcpvavga tattyasqfs 4861 lavdwnhdgl mdiariaqtg qsylytnvsn asnwtqsalg gsqsgttsgv aamdydwdga 4921 vdvlvskqsg svflsrntnt vsygtslhlr itdpnginvy ygntvklyns agvlvatqii 4981 npqsgmgvnd tsalvnfygl nagetynavl ikstgttasn idqtvntswg glqatdatha 5041 ydlsaeagta snngkfvgtg yndtffatag tdtydgsggw vyssgtgtwl anggmdvvdf 5101 rlstvgvtan lsstaaqatg fntstftnie gisgsnfndi ltgssgdnql egrggndtln 5161 igngghdtll ykllnasdat ggngsdvvng ftvgtwegta dtdridirel lqgsgytgng 5221 kasyvngvat ldaqagnigd fvkvtqsgsd tivqidrdgt ggtfattnvv tltgvhtdla 5281 tllanhqlmv v