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LOCUS NP_001284948 3212 aa linear INV 26-DEC-2023 melanogaster]. ACCESSION NP_001284948 VERSION NP_001284948.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 DBSOURCE REFSEQ: accession NM_001298019.1 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (residues 1 to 3212) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 3212) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (residues 1 to 3212) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (residues 1 to 3212) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (residues 1 to 3212) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (residues 1 to 3212) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (residues 1 to 3212) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (residues 1 to 3212) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (residues 1 to 3212) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (residues 1 to 3212) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (residues 1 to 3212) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (residues 1 to 3212) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (residues 1 to 3212) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (residues 1 to 3212) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (residues 1 to 3212) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (residues 1 to 3212) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (residues 1 to 3212) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (residues 1 to 3212) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (residues 1 to 3212) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (residues 1 to 3212) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (residues 1 to 3212) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (residues 1 to 3212) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (residues 1 to 3212) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. The reference sequence is identical to AHN59419. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..3212 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" Protein 1..3212 /product="uncharacterized protein, isoform Y" /name="CG34417 gene product from transcript CG34417-RY" /note="CG34417-PY" /calculated_mol_wt=359989 Region <512..1020 /region_name="PHA03247" /note="large tegument protein UL36; Provisional" /db_xref="CDD:223021" Region <864..1250 /region_name="PTZ00449" /note="104 kDa microneme/rhoptry antigen; Provisional" /db_xref="CDD:185628" Region <1223..1531 /region_name="PTZ00449" /note="104 kDa microneme/rhoptry antigen; Provisional" /db_xref="CDD:185628" Region <1909..2077 /region_name="PTZ00121" /note="MAEBL; Provisional" /db_xref="CDD:173412" Region 2423..2465 /region_name="Smoothelin" /note="Smoothelin cytoskeleton protein; pfam12510" /db_xref="CDD:463614" Region 2956..3005 /region_name="Smoothelin" /note="Smoothelin cytoskeleton protein; pfam12510" /db_xref="CDD:463614" Region 3104..3209 /region_name="CH_SMTN-like" /note="calponin homology (CH) domain found in the smoothelin family; cd21200" /db_xref="CDD:409049" Site order(3105,3109,3159,3161..3162,3165..3166,3168, 3177..3185,3193,3195..3196,3198..3199,3202..3203,3206) /site_type="other" /note="putative actin binding site [polypeptide binding]" /db_xref="CDD:409049" CDS 1..3212 /gene="CG34417" /locus_tag="Dmel_CG34417" /old_locus_tag="CG3950" /old_locus_tag="CG3960" /old_locus_tag="Dmel_CG3950" /old_locus_tag="Dmel_CG3960" /gene_synonym="BcDNA:GH23906; CG3950; CG3960; Dmel\CG34417" /coded_by="NM_001298019.1:460..10098" /db_xref="FLYBASE:FBpp0311300" /db_xref="GeneID:31591" /db_xref="FLYBASE:FBgn0085446" ORIGIN 1 msepngnghg nvntlagyag kdplatshgd alldqnfqsl kskevrdsts pthelrfhsm 61 tlsqpnttgw dvqtssevsp dgrayrtetl aktdgvekln ggglaefkgr neqrssashq 121 gddknfvkqa sdssktqlqe tvvfgdetsg rtemkmssts tsssskvvss sstveygdep 181 rylldnqekp hkqhqtrewe qdqrrqeqri qeqrqeqqir qeqlqrqeef qrqeqiqrqe 241 qiqrqeqvqr qqerftesre qsnstrnvqt qqhyeenkry vdmdkaspey qrhvqhlmeq 301 pgeiisntve ypkpnvkmit tvkrlpdgti vknkryeteq ltpsqshtth kqtnnqthnq 361 trnqvhnqrr eqdeqdsqtr dvvdnveqkh vtesqsfssv kkssrrfste ttsetveeyd 421 drdqptsrvv qkaptpsyap pshsprqspa kdfsthgfps vrpnkatqey psqrpgiage 481 evvvvrseks rqvkqqtssq rtietevvgd dyqepqrspq klreaptpsw eqpatrrqpv 541 eedfsthgfp svrttttstr pdqpdgevlh tsktvsrnqs anrktnteri ietqvehpna 601 pshstprsgs prrsqprddy assprgpagk psqsrpsntg gstttktttt sepltrrqlq 661 kerevdaahr afaaslrsss padsttsvgs hhqtprssvs snrtfrremr egshdsqaps 721 essrissttv trhttggnvt sntiktkttk pvktaseprs ptpkaggsvt tttttittks 781 spspapaspt taapptsapa ssappankkp hqmrrphdep epqlrrssks psveprqvqr 841 ettfegrrvs qdreisidel ilieetsgap gspkipspra qspgkpatrs qspekpqpra 901 tprqspekeq pafkqthevy tpsqpekqfp rarspektpg wtqpqvsprq spekqlpraq 961 spekvpavrq psvsprqspe kqipdpktrd qgpglprisp rqspekqlpk dvpqksrqsp 1021 ekdltnqqrr eeeifrstit ttqkrttnnl neefitnerd nqnqpisekk pqipanaepn 1081 tkpsetiesp dggfpsktte veaqpevkes ptyrkkgltr retfedrcrq ilgmeedgdt 1141 qgtyterpnn eqedvnvsht tietiqvkie dcpnddeddk prrvtetyvv rtqpkikvee 1201 elfvdvteae dveilvnpsk kspkeedspk ypkgpetpks prndqripsi pkkgqspvqf 1261 kteetprypq eqerypkepe tsqypkespr npkedaetin ineettivit kegskspspr 1321 wspsperrvp ksqqppspta spsvspvsgr kipnevesnf vtekiidcrg ktvvekisqr 1381 prtpspttpk kntkpsqkip ervpetesep ekdsesetkk ttsvsvtkte terrnsrttk 1441 tkqplplkep qskvpagksp rkdsltgrkr dslveetrit ttttttrqgr kpsdtngsps 1501 ikdrlrsspr kqktspqqtr tptpaqtrnp eddvdgdsss pdasptrvgn errrssnisv 1561 hteiiidhma pkspkterrs qggtgnvpsp irklpvterk esapvprvtr rdkaekvtrs 1621 tseniikmsg tkphpemssl kpggdrsrps kccttktinl seqrintatd iegviidiqq 1681 akssrepspd rivptpvpae letgkprypd vvqepddepr rkpqvtnipi feeesqtyvg 1741 cqiselhssn gievdildnp tveapksldy pvntpdtdes llsvhekvsr fthsaekvke 1801 pkvsapfsre fdvnakipen ddcllsinqk vdkflrtaen virptslpsr peierpglee 1861 ideellrddc tlsvsqkvhk fidtaeklap tmpqksprlv anierhisrq sepereldee 1921 sepeldrdtd vedddqtsql eteeeitqtv tkketlkefk qqtketretr rdskaepekl 1981 qkkspqtkvk eesarvpkyq akvsqkvsqw epkkqpqrep kvtqketple pkkqplskvk 2041 depekvnkre pkvpqkesqt klkeepervt kktpqkeprk eplrqsedep efspeeefdd 2101 eplpmtktht taiemkrqkd ilnrpsvfgq rtperksstt psptklngtr grpspstnli 2161 teekrsyrnq vtnvskpgtr kttpsanspa qspppkttsi skrmeqisqq swvvqdvdvd 2221 vevvgpapps hisekpqgks psptssrsls rspsrspsrr tstnlnttst ntttttehps 2281 tiktttpkpt stnpskdepe iipiesltek sitttyttnt tgrnvasrrn vfepvhethv 2341 dseptgrrps ymdhtkssle hirrdslein kshysrkssm eddspveprn pnssvkfdvp 2401 rksssrgade prktslkgkd edsdleleie eifdlqrlek lletvasyem rrriraqmrl 2461 irknminagt tttittitts ttpgkssplp kirrdqspag aaevktkevr tttsrrqqqq 2521 rveqvdsttp iapgktsphg kppvkprers aspaqkrris ppgkqspgdr stttttkvtt 2581 tsttrgapsk paqgpiwadr skvlkghatv pqtngstprk gstssttsss gkitrtmtss 2641 stttsssstt ntrnkqreed sitssygvgp tdenglplfg iralkkkatp paeepcetkq 2701 evtgyvieeq fysdnksppr herkeliyss nadelaaikq qlqdeddssp plldarvvre 2761 fkkvesqqsl pedaryvrrg svkelsekfi rkessssths thssiaqslv rhedetedds 2821 esndvcsvie apqmrqnqsh tmsttrssnt rsflnssadq rqvtsvddvl ermrnadnve 2881 epgdssedre arallnkflg asvimqgves mlpptatgqr lnsqgvkttr itntysksgn 2941 ststtnntsn ttnkvssssa pvtrttcdie eiwdeqvlkq lleqastyee rrkirarlre 3001 lmaereaaqh kssssseqrt etkskdggat vtttttkvtt rtvsgsaask nisplakfkq 3061 ldkqaaaqqa qksspttstp ttpggsaqpl fkftdpalna raatvkdqll qwckhktqey 3121 envqinnfss swsdglafca lihhflpdaf dyttltkqtr rhnfelafsv adekagiapl 3181 ldvedmvems rpdwkcvfvy vqsiyrrfrn cq