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LOCUS NP_001188548 3329 aa linear INV 26-DEC-2023 melanogaster]. ACCESSION NP_001188548 VERSION NP_001188548.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 DBSOURCE REFSEQ: accession NM_001201619.3 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (residues 1 to 3329) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 3329) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (residues 1 to 3329) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (residues 1 to 3329) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (residues 1 to 3329) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (residues 1 to 3329) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (residues 1 to 3329) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (residues 1 to 3329) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (residues 1 to 3329) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (residues 1 to 3329) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (residues 1 to 3329) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (residues 1 to 3329) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (residues 1 to 3329) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (residues 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (residues 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (residues 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (residues 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (residues 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (residues 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (residues 1 to 3329) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (residues 1 to 3329) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (residues 1 to 3329) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (residues 1 to 3329) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. The reference sequence is identical to ADV37632. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..3329 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" Protein 1..3329 /product="uncharacterized protein, isoform K" /name="CG34417 gene product from transcript CG34417-RK" /note="CG34417-PK" /calculated_mol_wt=372727 Region <512..1137 /region_name="PHA03247" /note="large tegument protein UL36; Provisional" /db_xref="CDD:223021" Region <981..1367 /region_name="PTZ00449" /note="104 kDa microneme/rhoptry antigen; Provisional" /db_xref="CDD:185628" Region <1340..1648 /region_name="PTZ00449" /note="104 kDa microneme/rhoptry antigen; Provisional" /db_xref="CDD:185628" Region <2026..2194 /region_name="PTZ00121" /note="MAEBL; Provisional" /db_xref="CDD:173412" Region 2540..2582 /region_name="Smoothelin" /note="Smoothelin cytoskeleton protein; pfam12510" /db_xref="CDD:463614" Region 3073..3122 /region_name="Smoothelin" /note="Smoothelin cytoskeleton protein; pfam12510" /db_xref="CDD:463614" Region 3221..3326 /region_name="CH_SMTN-like" /note="calponin homology (CH) domain found in the smoothelin family; cd21200" /db_xref="CDD:409049" Site order(3222,3226,3276,3278..3279,3282..3283,3285, 3294..3302,3310,3312..3313,3315..3316,3319..3320,3323) /site_type="other" /note="putative actin binding site [polypeptide binding]" /db_xref="CDD:409049" CDS 1..3329 /gene="CG34417" /locus_tag="Dmel_CG34417" /old_locus_tag="CG3950" /old_locus_tag="CG3960" /old_locus_tag="Dmel_CG3950" /old_locus_tag="Dmel_CG3960" /gene_synonym="BcDNA:GH23906; CG3950; CG3960; Dmel\CG34417" /coded_by="NM_001201619.3:460..10449" /db_xref="FLYBASE:FBpp0292303" /db_xref="GeneID:31591" /db_xref="FLYBASE:FBgn0085446" ORIGIN 1 msepngnghg nvntlagyag kdplatshgd alldqnfqsl kskevrdsts pthelrfhsm 61 tlsqpnttgw dvqtssevsp dgrayrtetl aktdgvekln ggglaefkgr neqrssashq 121 gddknfvkqa sdssktqlqe tvvfgdetsg rtemkmssts tsssskvvss sstveygdep 181 rylldnqekp hkqhqtrewe qdqrrqeqri qeqrqeqqir qeqlqrqeef qrqeqiqrqe 241 qiqrqeqvqr qqerftesre qsnstrnvqt qqhyeenkry vdmdkaspey qrhvqhlmeq 301 pgeiisntve ypkpnvkmit tvkrlpdgti vknkryeteq ltpsqshtth kqtnnqthnq 361 trnqvhnqrr eqdeqdsqtr dvvdnveqkh vtesqsfssv kkssrrfste ttsetveeyd 421 drdqptsrvv qkaptpsyap pshsprqspa kdfsthgfps vrpnkatqey psqrpgiage 481 evvvvrseks rqvkqqtssq rtietevvgd dyqepqrspq klreaptpsw eqpatrrqpv 541 eedfsthgfp svrttttstr pdqpdgevlh tsktvsrnqs anrktnteri ietqvehpna 601 pshstprsgs prrsqprddy assprgpagk psqsrpsntg gstttktttt sepltrrqlq 661 kerevdaahr afaaslrsss padsttsvgs hhqtprssvs snrtfrremr egshdsqaps 721 essrissttv trhttggnvt sntiktkttk pvktaseprs ptpkaggsvt tttttittks 781 spspapaspt taapptsapa ssappdnkls qytytttkpg difslppttp ptinneptlt 841 ttrntttttt ttttatsdnl qnhpkksaie patdtdsqpi rkvklsanea kvveeapcvr 901 rqyyqlgneg enpetpessg tpankkphqm rrphdepepq lrrsskspsv eprqvqrett 961 fegrrvsqdr eisidelili eetsgapgsp kipspraqsp gkpatrsqsp ekpqpratpr 1021 qspekeqpaf kqthevytps qpekqfprar spektpgwtq pqvsprqspe kqlpraqspe 1081 kvpavrqpsv sprqspekqi pdpktrdqgp glprisprqs pekqlpkdvp qksrqspekd 1141 ltnqqrreee ifrstitttq krttnnlnee fitnerdnqn qpisekkpqi panaepntkp 1201 setiespdgg fpskttevea qpevkespty rkkgltrret fedrcrqilg meedgdtqgt 1261 yterpnneqe dvnvshttie tiqvkiedcp nddeddkprr vtetyvvrtq pkikveeelf 1321 vdvteaedve ilvnpskksp keedspkypk gpetpksprn dqripsipkk gqspvqfkte 1381 etprypqeqe rypkepetsq ypkesprnpk edaetinine ettivitkeg skspsprwsp 1441 sperrvpksq qppsptasps vspvsgrkip nevesnfvte kiidcrgktv vekisqrprt 1501 pspttpkknt kpsqkiperv petesepekd sesetkktts vsvtkteter rnsrttktkq 1561 plplkepqsk vpagksprkd sltgrkrdsl veetritttt tttrqgrkps dtngspsikd 1621 rlrssprkqk tspqqtrtpt paqtrnpedd vdgdssspda sptrvgnerr rssnisvhte 1681 iiidhmapks pkterrsqgg tgnvpspirk lpvterkesa pvprvtrrdk aekvtrstse 1741 niikmsgtkp hpemsslkpg gdrsrpskcc ttktinlseq rintatdieg viidiqqaks 1801 srepspdriv ptpvpaelet gkprypdvvq epddeprrkp qvtnipifee esqtyvgcqi 1861 selhssngie vdildnptve apksldypvn tpdtdeslls vhekvsrfth saekvkepkv 1921 sapfsrefdv nakipenddc llsinqkvdk flrtaenvir ptslpsrpei erpgleeide 1981 ellrddctls vsqkvhkfid taeklaptmp qksprlvani erhisrqsep ereldeesep 2041 eldrdtdved ddqtsqlete eeitqtvtkk etlkefkqqt ketretrrds kaepeklqkk 2101 spqtkvkees arvpkyqakv sqkvsqwepk kqpqrepkvt qketplepkk qplskvkdep 2161 ekvnkrepkv pqkesqtklk eepervtkkt pqkeprkepl rqsedepefs peeefddepl 2221 pmtkthttai emkrqkdiln rpsvfgqrtp erkssttpsp tklngtrgrp spstnlitee 2281 krsyrnqvtn vskpgtrktt psanspaqsp ppkttsiskr meqisqqswv vqdvdvdvev 2341 vgpappshis ekpqgkspsp tssrslsrsp srspsrrtst nlnttstntt tttehpstik 2401 tttpkptstn pskdepeiip ieslteksit ttyttnttgr nvasrrnvfe pvhethvdse 2461 ptgrrpsymd htksslehir rdsleinksh ysrkssmedd spveprnpns svkfdvprks 2521 ssrgadeprk tslkgkdeds dleleieeif dlqrleklle tvasyemrrr iraqmrlirk 2581 nminagtttt ittittsttp gkssplpkir rdqspagaae vktkevrttt srrqqqqrve 2641 qvdsttpiap gktsphgkpp vkprersasp aqkrrisppg kqspgdrstt tttkvtttst 2701 trgapskpaq gpiwadrskv lkghatvpqt ngstprkgst ssttsssgki trtmtssstt 2761 tssssttntr nkqreedsit ssygvgptde nglplfgira lkkkatppae epcetkqevt 2821 gyvieeqfys dnkspprher keliyssnad elaaikqqlq deddssppll darvvrefkk 2881 vesqqslped aryvrrgsvk elsekfirke ssssthsths siaqslvrhe deteddsesn 2941 dvcsvieapq mrqnqshtms ttrssntrsf lnssadqrqv tsvddvlerm rnadnveepg 3001 dssedreara llnkflgasv imqgvesmlp ptatgqrlns qgvkttritn tysksgnsts 3061 ttnntsnttn kvssssapvt rttcdieeiw deqvlkqlle qastyeerrk irarlrelma 3121 ereaaqhkss ssseqrtetk skdggatvtt tttkvttrtv sgsaasknis plakfkqldk 3181 qaaaqqaqks spttstpttp ggsaqplfkf tdpalnaraa tvkdqllqwc khktqeyenv 3241 qinnfsssws dglafcalih hflpdafdyt tltkqtrrhn felafsvade kagiaplldv 3301 edmvemsrpd wkcvfvyvqs iyrrfrncq