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LOCUS NP_001096895 3246 aa linear INV 26-DEC-2023 melanogaster]. ACCESSION NP_001096895 VERSION NP_001096895.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 DBSOURCE REFSEQ: accession NM_001103425.3 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (residues 1 to 3246) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 3246) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (residues 1 to 3246) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (residues 1 to 3246) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (residues 1 to 3246) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (residues 1 to 3246) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (residues 1 to 3246) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (residues 1 to 3246) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (residues 1 to 3246) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (residues 1 to 3246) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (residues 1 to 3246) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (residues 1 to 3246) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (residues 1 to 3246) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (residues 1 to 3246) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (residues 1 to 3246) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (residues 1 to 3246) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (residues 1 to 3246) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (residues 1 to 3246) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (residues 1 to 3246) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (residues 1 to 3246) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (residues 1 to 3246) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (residues 1 to 3246) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (residues 1 to 3246) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. The reference sequence is identical to ABW09347. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..3246 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" Protein 1..3246 /product="uncharacterized protein, isoform F" /name="CG34417 gene product from transcript CG34417-RF" /note="CG34417-PF" /calculated_mol_wt=363795 Region <566..1191 /region_name="PHA03247" /note="large tegument protein UL36; Provisional" /db_xref="CDD:223021" Region <1035..1421 /region_name="PTZ00449" /note="104 kDa microneme/rhoptry antigen; Provisional" /db_xref="CDD:185628" Region <1394..1702 /region_name="PTZ00449" /note="104 kDa microneme/rhoptry antigen; Provisional" /db_xref="CDD:185628" Region <2080..2248 /region_name="PTZ00121" /note="MAEBL; Provisional" /db_xref="CDD:173412" Region 2594..2636 /region_name="Smoothelin" /note="Smoothelin cytoskeleton protein; pfam12510" /db_xref="CDD:463614" Region 3127..3176 /region_name="Smoothelin" /note="Smoothelin cytoskeleton protein; pfam12510" /db_xref="CDD:463614" CDS 1..3246 /gene="CG34417" /locus_tag="Dmel_CG34417" /old_locus_tag="CG3950" /old_locus_tag="CG3960" /old_locus_tag="Dmel_CG3950" /old_locus_tag="Dmel_CG3960" /gene_synonym="BcDNA:GH23906; CG3950; CG3960; Dmel\CG34417" /coded_by="NM_001103425.3:569..10309" /db_xref="FLYBASE:FBpp0111618" /db_xref="GeneID:31591" /db_xref="FLYBASE:FBgn0085446" ORIGIN 1 mevecdlgdi qneellrkmw qqsedserkr qirshlyklr esrlcnlyrh etdpmsepng 61 nghgnvntla gyagkdplat shgdalldqn fqslkskevr dstspthelr fhsmtlsqpn 121 ttgwdvqtss evspdgrayr tetlaktdgv eklnggglae fkgrneqrss ashqgddknf 181 vkqasdsskt qlqetvvfgd etsgrtemkm sststssssk vvsssstvey gdeprylldn 241 qekphkqhqt reweqdqrrq eqriqeqrqe qqirqeqlqr qeefqrqeqi qrqeqiqrqe 301 qvqrqqerft esreqsnstr nvqtqqhyee nkryvdmdka speyqrhvqh lmeqpgeiis 361 ntveypkpnv kmittvkrlp dgtivknkry eteqltpsqs htthkqtnnq thnqtrnqvh 421 nqrreqdeqd sqtrdvvdnv eqkhvtesqs fssvkkssrr fstettsetv eeyddrdqpt 481 srvvqkaptp syappshspr qspakdfsth gfpsvrpnka tqeypsqrpg iageevvvvr 541 seksrqvkqq tssqrtiete vvgddyqepq rspqklreap tpsweqpatr rqpveedfst 601 hgfpsvrttt tstrpdqpdg evlhtsktvs rnqsanrktn teriietqve hpnapshstp 661 rsgsprrsqp rddyassprg pagkpsqsrp sntggstttk ttttsepltr rqlqkerevd 721 aahrafaasl rssspadstt svgshhqtpr ssvssnrtfr remregshds qapsessris 781 sttvtrhttg gnvtsntikt kttkpvktas eprsptpkag gsvtttttti ttksspspap 841 aspttaappt sapassappd nklsqytytt tkpgdifslp pttpptinne ptltttrntt 901 ttttttttat sdnlqnhpkk saiepatdtd sqpirkvkls aneakvveea pcvrrqyyql 961 gnegenpetp essgtpankk phqmrrphde pepqlrrssk spsveprqvq rettfegrrv 1021 sqdreiside lilieetsga pgspkipspr aqspgkpatr sqspekpqpr atprqspeke 1081 qpafkqthev ytpsqpekqf prarspektp gwtqpqvspr qspekqlpra qspekvpavr 1141 qpsvsprqsp ekqipdpktr dqgpglpris prqspekqlp kdvpqksrqs pekdltnqqr 1201 reeeifrsti tttqkrttnn lneefitner dnqnqpisek kpqipanaep ntkpseties 1261 pdggfpsktt eveaqpevke sptyrkkglt rretfedrcr qilgmeedgd tqgtyterpn 1321 neqedvnvsh ttietiqvki edcpnddedd kprrvtetyv vrtqpkikve eelfvdvtea 1381 edveilvnps kkspkeedsp kypkgpetpk sprndqrips ipkkgqspvq fkteetpryp 1441 qeqerypkep etsqypkesp rnpkedaeti nineettivi tkegskspsp rwspsperrv 1501 pksqqppspt aspsvspvsg rkipnevesn fvtekiidcr gktvvekisq rprtpspttp 1561 kkntkpsqki pervpetese pekdsesetk kttsvsvtkt eterrnsrtt ktkqplplke 1621 pqskvpagks prkdsltgrk rdslveetri tttttttrqg rkpsdtngsp sikdrlrssp 1681 rkqktspqqt rtptpaqtrn peddvdgdss spdasptrvg nerrrssnis vhteiiidhm 1741 apkspkterr sqggtgnvps pirklpvter kesapvprvt rrdkaekvtr stseniikms 1801 gtkphpemss lkpggdrsrp skccttktin lseqrintat diegviidiq qakssrepsp 1861 drivptpvpa eletgkpryp dvvqepddep rrkpqvtnip ifeeesqtyv gcqiselhss 1921 ngievdildn ptveapksld ypvntpdtde sllsvhekvs rfthsaekvk epkvsapfsr 1981 efdvnakipe nddcllsinq kvdkflrtae nvirptslps rpeierpgle eideellrdd 2041 ctlsvsqkvh kfidtaekla ptmpqksprl vanierhisr qseperelde esepeldrdt 2101 dvedddqtsq leteeeitqt vtkketlkef kqqtketret rrdskaepek lqkkspqtkv 2161 keesarvpky qakvsqkvsq wepkkqpqre pkvtqketpl epkkqplskv kdepekvnkr 2221 epkvpqkesq tklkeeperv tkktpqkepr keplrqsede pefspeeefd deplpmtkth 2281 ttaiemkrqk dilnrpsvfg qrtperksst tpsptklngt rgrpspstnl iteekrsyrn 2341 qvtnvskpgt rkttpsansp aqspppktts iskrmeqisq qswvvqdvdv dvevvgpapp 2401 shisekpqgk spsptssrsl srspsrspsr rtstnlntts tntttttehp stiktttpkp 2461 tstnpskdep eiipieslte ksitttyttn ttgrnvasrr nvfepvheth vdseptgrrp 2521 symdhtkssl ehirrdslei nkshysrkss meddspvepr npnssvkfdv prksssrgad 2581 eprktslkgk dedsdlelei eeifdlqrle klletvasye mrrriraqmr lirknminag 2641 ttttittitt sttpgksspl pkirrdqspa gaaevktkev rtttsrrqqq qrveqvdstt 2701 piapgktsph gkppvkprer saspaqkrri sppgkqspgd rstttttkvt ttsttrgaps 2761 kpaqgpiwad rskvlkghat vpqtngstpr kgstssttss sgkitrtmts sstttsssst 2821 tntrnkqree dsitssygvg ptdenglplf giralkkkat ppaeepcetk qevtgyviee 2881 qfysdnkspp rherkeliys snadelaaik qqlqdeddss pplldarvvr efkkvesqqs 2941 lpedaryvrr gsvkelsekf irkessssth sthssiaqsl vrhedetedd sesndvcsvi 3001 eapqmrqnqs htmsttrssn trsflnssad qrqvtsvddv lermrnadnv eepgdssedr 3061 earallnkfl gasvimqgve smlpptatgq rlnsqgvktt ritntysksg nststtnnts 3121 nttnkvssss apvtrttcdi eeiwdeqvlk qlleqastye errkirarlr elmaereaaq 3181 hkssssseqr tetkskdgga tvtttttkvt trtvsgsaas knisplakfk qldkqaaaqq 3241 aqktsk