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LOCUS NM_206650 3145 bp mRNA linear INV 26-DEC-2023 (Gclc), transcript variant B, mRNA. ACCESSION NM_206650 VERSION NM_206650.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3145) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3145) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3145) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3145) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3145) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3145) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3145) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3145) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3145) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3145) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3145) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3145) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3145) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3145) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3145) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3145) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3145) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3145) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3145) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3145) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3145) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3145) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3145) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_206650.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3145 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3145 /gene="Gclc" /locus_tag="Dmel_CG2259" /gene_synonym="2259; CG2259; Dmel\CG2259; DmGCLC; DmGCS; DmGCSh; GCL; gclc; gclC; GclC; GCLc; GCLC; Gcs; Gcsh; GCSh; mTOR" /note="Glutamate-cysteine ligase catalytic subunit" /map="7D6-7D6" /db_xref="FLYBASE:FBgn0040319" /db_xref="GeneID:53581" CDS 42..2195 /gene="Gclc" /locus_tag="Dmel_CG2259" /gene_synonym="2259; CG2259; Dmel\CG2259; DmGCLC; DmGCS; DmGCSh; GCL; gclc; gclC; GclC; GCLc; GCLC; Gcs; Gcsh; GCSh; mTOR" /EC_number="6.3.2.2" /note="CG2259 gene product from transcript CG2259-RB; CG2259-PB; Gclc-PB; glutamate cysteine ligase; glutamate-cysteine ligase; catalytic subunit of glutamate- cysteine ligase; gamma-glutamylcysteine ligase; gamma-Glutamylcysteine synthetase catalytic subunit" /codon_start=1 /product="Glutamate-cysteine ligase catalytic subunit, isoform B" /protein_id="NP_996373.1" /db_xref="FLYBASE:FBpp0089361" /db_xref="GeneID:53581" /db_xref="FLYBASE:FBgn0040319" /translation="MGLLSEGSPLSWEETKALADHVREHGVNQFINLYHRLKDRQGDI LKWGDEVEYIIVKFDDEQKVARVALRAQDLLAQLNEKELADPNGVKSLWRPEYGAYMI EGTPGKPFGGLMAHFNLVEANMRYRREEVTELLAKDECVMSITNFPRLGAPNFTYPLA QPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRNIRKRRGEKVSIKLKVFKDTKTKLP VEGAPPGEPDVVLLDAMGFGMGCCCLQLTFQACNITEARRLYDQLAPLCPIMLALTAA SPIYRGYLTESDCRWNVISSSVDCRTEEERGLAPLDQQKFRIAKSRYDSIDSYLSPEG AKYNDVPLTYDEKVYQRLVEGGIDHLLAQHVAHLFIRDTVSLFSEKVHQNDNEDTDHF ENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCEAQISDFENAAIVCFVVLLTRVILSYQ LNFLTPISKVDENMQTAQKRDACRKEKFWFRKSSKTTEQRAAKAQAQAQAQAKAQAQT NGKATLNGNGLANGNGNGSENSDQEEQQPLTNGSAKMNGHGSGTTNGTNGSSNGSSNG TDSDHTDTDDEENELFQLLSINEIFNGKPNVFPGLVPLIRSYLQSMEVDTDTHCTIEQ YLRFIQKRAAGELITTATWMREQVLSHPDYKQDSVVSERINYDLLKRIQGIQEGKQVE PALLGQDYHSKTKTKDFIPPALQKQLAKNGCCEEK" misc_feature 735..2066 /gene="Gclc" /locus_tag="Dmel_CG2259" /gene_synonym="2259; CG2259; Dmel\CG2259; DmGCLC; DmGCS; DmGCSh; GCL; gclc; gclC; GclC; GCLc; GCLC; Gcs; Gcsh; GCSh; mTOR" /note="Glutamate-cysteine ligase; Region: GCS; pfam03074" /db_xref="CDD:460796" ORIGIN 1 ggacgtctca tcggatcggt ttcgtaagaa aaaagtgggc aatgggtcta ctgagcgagg 61 gcagtccact ctcctgggag gagaccaagg cgctggctga tcatgtgcgt gagcatggcg 121 tcaatcagtt catcaacttg taccacagac tcaaggatcg ccagggtgac atattgaaat 181 ggggcgacga ggtggagtac attattgtca agttcgacga tgaacagaag gtggcacgtg 241 tggcgctgcg cgcccaggat ctgctggcac agctcaatga gaaggaactg gccgatccca 301 atggtgtcaa gtcgctgtgg cgtccggaat acggagccta catgattgag ggcacaccgg 361 gcaaaccctt tggcggtctg atggcacact tcaatctggt tgaggccaat atgcgctatc 421 gtcgcgaaga ggtcaccgag ctgctggcca aggacgagtg cgttatgtcc attacgaatt 481 tcccacgact cggcgcacca aatttcactt atccgcttgc ccagccgcgt cccgaggatc 541 ctctcagttc agcccgctcg ctctacttcc cggatgaggc catctttccg ggtcacccgc 601 gtttcaagac actcacgcgt aacattcgca agcgacgcgg cgagaaggtg tccatcaagc 661 taaaagtttt caaggacaca aagacgaagc taccggtgga gggtgctccg cctggcgaac 721 cggatgtggt gctcctggac gccatgggct tcggcatggg ctgctgttgc ttgcagctca 781 ccttccaggc ctgtaacatt acggaggcgc gtcgcctcta cgatcagctg gctcccctct 841 gtccgatcat gttggctctg acggccgctt cgcccattta caggggctat ctaaccgaat 901 cggattgtcg atggaatgtg attagctcct cggtggattg ccgcacggaa gaggaacgcg 961 gactggcgcc gctggatcag caaaagttca ggatagccaa gtcgcgatac gattcgattg 1021 actcgtattt gtcgcccgag ggagccaaat ataacgatgt accgctcaca tacgatgaga 1081 aggtctatca gcgtctggtg gagggcggta tcgatcatct gttggcccag catgttgccc 1141 atttgtttat acgcgacacc gtgtcgctgt tcagcgagaa ggtgcatcaa aacgacaacg 1201 aggatacgga tcatttcgag aacattcagt ccaccaattg gcagaccatg cgcttcaagc 1261 cgccgccacc gaacagctcc attggctggc gtgtcgagtt tcgaccttgc gaggcgcaga 1321 tcagtgattt cgagaatgcg gccatcgtgt gctttgtggt gctgctcacc cgtgtgattc 1381 tctcctacca gctgaacttc ctaacgccga tcagcaaggt ggacgagaac atgcagacgg 1441 cccagaagcg agatgcttgt cgcaaggaga agttttggtt ccgcaaatcc tcgaagacca 1501 ccgagcagag ggcggccaag gcgcaggcac aagctcaagc gcaagctaaa gcccaggccc 1561 agacgaatgg caaggccact ttgaatggca atggactggc gaatggaaat gggaatggca 1621 gcgagaacag tgaccaggaa gagcagcagc ctctgaccaa cggttcggcc aagatgaatg 1681 gccacggaag tggcaccact aacggcacta atggctcctc caatggatca tcgaatggca 1741 ccgatagcga tcacaccgac accgatgacg aggagaatga gctgttccag ctgctgtcca 1801 tcaatgagat cttcaatgga aagcccaacg tttttccggg tctggtgcca ttgatccgca 1861 gctatttgca gtccatggag gtggacaccg atacgcattg caccattgaa cagtatcttc 1921 gctttatcca gaagcgtgcc gccggcgagc taatcaccac ggccacctgg atgcgcgaac 1981 aggtgcttag ccacccggat tacaagcagg attccgtggt gagcgagcgc atcaactacg 2041 atttgctgaa gcgcatccaa ggcatccagg agggcaagca ggtggagcca gcgctgctcg 2101 gacaagacta tcattccaag acgaagacga aagacttcat tccgccggcc ttgcagaagc 2161 agttagccaa gaacggctgc tgcgaggaga aatgatcgag gagcgcgctg cggacgcgtt 2221 cagcgcagct ggccgccggt ggccggcgca tgtgattcgg gttttgtggg tccgttcgga 2281 tggagtgcgg catatatgtt gagggcaaag gcaaaggcga aggcgaaggc aacggcaaaa 2341 cgaaacggaa tggatacgtt acggatacgg agcaacattt atcaatatta tttttaatag 2401 cataatttca aacggattaa caattagcgt gcaccaagat cctaattgtg gacaaatgtt 2461 ttgcggccgt gcgtgacctt ttggaaatga aagtcaagca gaccaggaag gaggaggcga 2521 cggagaagga gaggatggat taaggaatgg ttatggggca catgaggatc cacgtgccgt 2581 aggatcctcc gccagccacg atatcctcca ggaagtcacc atgctctcgt catcgtttcg 2641 atggaacttc gagttcctcg aaccgtcgat cgcagccgat ttgccatagt tatatagaga 2701 gctaaatgct aaaccaacta tataccagcg tcaagaacta caacggcaac ataaatctca 2761 actaagtgcc gttccacgag acctacaaaa atatgaatac atatagttca aaacgaggca 2821 aggttaaaag tgtatttctg tttgttttcg tttatatcat atatatttat tatactattc 2881 ctattcttat aaatgcaagt acaatgaaaa gttgtttatt ttttttaata gatatattta 2941 cacacacaca cacacataca cacgcaaata cacatttgtt taaaagtggc ctgctgttat 3001 taaactagat atgataagta cacatataac gaaaaaaaca acactgtgct attataattt 3061 attgtgtatg tgattgtttc cccattatga tacgattatg atttattgtg accacaagca 3121 agcaaataaa cggaaaatat tgttg