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LOCUS NM_206637 2047 bp mRNA linear INV 26-DEC-2023 (Acsf3), mRNA. ACCESSION NM_206637 VERSION NM_206637.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2047) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2047) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2047) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2047) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2047) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2047) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2047) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2047) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2047) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2047) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2047) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2047) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2047) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2047) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2047) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2047) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2047) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2047) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2047) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2047) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2047) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2047) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2047) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_206637.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2047 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2047 /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /note="Acyl-CoA synthetase family member 3" /map="7B1-7B1" /db_xref="FLYBASE:FBgn0029945" /db_xref="GeneID:31668" CDS 115..1947 /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /EC_number="6.2.1.76" /note="CG18155 gene product from transcript CG18155-RB; CG18155-PB; Acsf3-PB" /codon_start=1 /product="Acyl-CoA synthetase family member 3" /protein_id="NP_996360.2" /db_xref="FLYBASE:FBpp0071010" /db_xref="GeneID:31668" /db_xref="FLYBASE:FBgn0029945" /translation="MLLLRRCHKLKLRPLARLCSAELIHKDGFIEKLRHSFDEEERSN VVVPTFKKAMLYPDEIAVKDINGEYTYFQLYMAAKRLGIQISNICGGAALSNVTYLCS NNALWIAIQWSCWISGQVAVPLESGQAIDQLQRQASNCKTKLLIATKEFESLAQELSQ GVKSATIILDHSFLPTAESVSSTSMYAKQLVAIQGVIVTENTFPNDFYSKAPAMLIYT PNAVNSPKPVLLTHRNIEAQMRCLIGTWHLGPTDCMLPILSMNRMHAALAAVLSVGGN VVLQQKFDGHNAWSALLGINSPSKQRVTLFLAMPIVYKRLIVEYEKMFAKDSRMVEYI VNHCRQKIRLMATAFALLPDSVFYRWREITGQNIYEYYGMMETGLVLGHPLNKRQRDS PHNGPTAVAMANNTAPNDYRPGTLGSPLKGVTARLISNKGDELITCKNELGGSVDSGL IPVEDIGGDASLAGTIIGELQIAGSNLVSNTLANNNQEMEHKGTTNNEEQENNQDGFF KTGDICAYRNGNFYFLSKSSDIFTVGGYKVYGSEIKKVLISHPNINDVAVLGIPNKMW GHRLGVICIVSPDADIDLDAIKTYCYRHLPAHKCPTVFKTLVSK" misc_feature 286..1923 /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /note="This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate...; Region: Adenylate forming domain, Class I superfamily; cl17068" /db_xref="CDD:473059" misc_feature order(757..759,766..783,787..792) /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341228" misc_feature order(766..768,886..891,1039..1041,1045..1050,1057..1059, 1156..1161,1222..1239,1648..1650,1684..1686,1687..1689, 1714..1725,1906..1908) /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /note="active site" /db_xref="CDD:341228" misc_feature order(766..768,1156..1161,1222..1239,1648..1650, 1684..1686,1687..1689,1723..1725) /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature order(886..888,1045..1050,1057..1059,1156..1158, 1714..1722,1888..1890,1906..1908) /gene="Acsf3" /locus_tag="Dmel_CG18155" /gene_synonym="ACSF3; CG18155; Dmel\CG18155; FBgn0029945" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341228" ORIGIN 1 tgaaaatctg agttaaattt tgctctttgt actattattt aaaatagctg cattcgcgca 61 cacaccatca aataatccat aaaaaaaaaa aaaaaacaaa aaaaaaacag taagatgctg 121 ctacttcgcc gttgccacaa gttaaagttg cgtccattgg cccgtctttg ctccgccgaa 181 ttgatacata aggatggctt catcgagaag ctgcgccata gtttcgatga agaggagcgt 241 agtaatgtgg tggtgcccac gttcaaaaag gctatgctct atccggatga gatcgccgtg 301 aaagacatca atggggagta cacttatttt caattgtata tggccgccaa acgtctgggc 361 attcagatct caaatatatg tggcggcgcc gcgctttcga atgtaacata cttgtgctcg 421 aacaacgccc tgtggatagc tatacaatgg agctgttgga tttccggaca agtggcagtt 481 ccactggaat ccggccaggc gatagatcaa ttgcaacggc aggcatcgaa ctgcaagacc 541 aagctactga tagccactaa ggaatttgag tcacttgccc aggaattgtc gcagggtgtg 601 aaatcagcta ccatcatatt ggatcactca tttctcccga cggcggagag tgtatcctcg 661 acatcgatgt atgccaaaca gctggtggcg atccagggtg ttatcgtaac ggaaaatacg 721 tttccaaacg atttctattc caaggcacca gccatgctga tctatacgcc caatgcggtc 781 aatagtccca agccagtgtt gttgacccat cggaatatcg aagctcagat gcgatgtttg 841 atcggaactt ggcatttggg acctacagac tgtatgctgc caatactatc catgaatcga 901 atgcatgccg ccttggcagc agttctcagt gtgggcggta atgtggtgtt gcagcaaaaa 961 ttcgatggtc acaatgcgtg gagtgctcta ttgggcataa atagcccatc caagcaacgg 1021 gtcaccctct ttttggccat gccaattgtc tacaagcgtc tgattgtcga gtatgagaaa 1081 atgtttgcca aggattcgag aatggttgag tacattgtga atcattgccg gcaaaagata 1141 cgattgatgg cgacagcttt tgccttgcta ccggattcgg tgttttacag atggcgcgag 1201 ataacgggtc aaaatatata cgaatactat ggaatgatgg aaacgggatt ggttttgggt 1261 catccgttaa ataaacgaca acgtgactct ccacataatg gtccaacagc ggttgctatg 1321 gccaataata ccgcccccaa cgattatcga ccgggtacgt tgggttcgcc gttgaaggga 1381 gtcacggccc gattgatcag taataagggt gacgagctaa taacctgcaa aaacgaactc 1441 ggtggatccg tggatagtgg cctaataccg gtggaggata tcggcggcga tgcatccttg 1501 gcgggaacca taattggtga acttcaaatt gctggttcca atttggtgtc caatacattg 1561 gctaacaaca atcaggaaat ggaacacaaa ggaaccacaa acaatgagga gcaggagaac 1621 aaccaagatg gtttctttaa aaccggagac atttgcgcct atcgtaacgg aaacttttat 1681 tttttaagta aaagcagcga tatcttcacc gtcggcggtt ataaggtata cggatcggaa 1741 atcaaaaagg tattgatctc acatccgaat atcaacgatg tggctgtctt aggtattccc 1801 aataaaatgt ggggccatcg tcttggtgtc atatgcattg tatccccgga tgcggatatt 1861 gatttggatg cgatcaagac atactgctat cgccacctac cagcccacaa atgccctacc 1921 gttttcaaga ccctcgtttc caagtagata taagacgacc cctaagccca tagctgcaaa 1981 tttaagtgat tactgactgt tatgataata gaaataaaaa taataataat aatatcattt 2041 aagcttc