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LOCUS NM_167364 2626 bp mRNA linear INV 26-DEC-2023 A (CG15747), mRNA. ACCESSION NM_167364 VERSION NM_167364.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2626) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2626) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2626) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2626) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2626) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2626) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2626) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2626) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2626) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2626) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2626) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2626) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2626) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2626) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2626) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2626) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2626) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2626) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2626) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2626) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2626) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2626) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2626) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_167364.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2626 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2626 /gene="CG15747" /locus_tag="Dmel_CG15747" /gene_synonym="Dmel\CG15747" /map="11E12-11E13" /db_xref="FLYBASE:FBgn0030474" /db_xref="GeneID:32288" CDS 58..1221 /gene="CG15747" /locus_tag="Dmel_CG15747" /gene_synonym="Dmel\CG15747" /note="CG15747 gene product from transcript CG15747-RA; CG15747-PA" /codon_start=1 /product="uncharacterized protein, isoform A" /protein_id="NP_727694.1" /db_xref="FLYBASE:FBpp0073597" /db_xref="GeneID:32288" /db_xref="FLYBASE:FBgn0030474" /translation="MAKQYGLILPGQQKKVPLKRVERPSIFDENSDSETDDDPAAPQF QPRTGGVSMGPSLMERRVARRQQEKALAEDPTIFQYDELYDDMDSKREEAKQTKSQEP RKPKYIGRLMEHAERRKLEKELRIERQVQKDREAEGEMYKDKDTYVTAAYRKKLESIR QMQEQEQRDEYLEAIGDVTKQKDLDGFYRHLYEQKLGGPAQQDVVKPKTAPTTDEVAY KPIKAEAVKHRSYRRRRPSEDEEEQTKSKSDAASDATKSTDQTESIPAQAHLTNNIDA DSDFSIDDSSDEEDEKENEKEKNKLSQIKKEDKDKAPESSEPVKPKEPEASQQSPTKK DDSNAEVNEKDLPVPRVTKPPVDRTLFWRKRTVGEVLAAALARYEERKRARLQ" misc_feature 244..600 /gene="CG15747" /locus_tag="Dmel_CG15747" /gene_synonym="Dmel\CG15747" /note="Nuclear speckle splicing regulatory protein 1, N-terminal; Region: NSRP1_N; pfam09745" /db_xref="CDD:462876" ORIGIN 1 gagggatttt tgtggtcgct tcagacggtc atactaatta ttcataaata aacaagaatg 61 gcaaaacaat atggccttat tttacccggc caacagaaga aagtacctct aaaacgagtc 121 gaaaggccct ccatcttcga cgagaacagc gactccgaga ccgatgatga cccagctgct 181 cctcaatttc agccaagaac cggcggcgta tccatgggtc ctagtctaat ggaacgccgc 241 gtggcccgcc ggcagcagga gaaggccctg gccgaggatc caaccatatt ccagtacgac 301 gagctgtacg atgacatgga cagcaaacgc gaggaggcca agcagacgaa gagccaggag 361 ccgcggaaac caaagtacat tggccggctg atggagcatg ccgagcgcag aaagctggag 421 aaggagctgc gcatcgaacg gcaggtgcag aaggatcgcg aagccgaggg cgagatgtat 481 aaggacaagg acacctacgt gactgccgcc taccgcaaga agctcgagtc catacgccag 541 atgcaggagc aggagcagcg tgatgagtac ctcgaggcca ttggcgatgt gaccaagcaa 601 aaggatctgg acggcttcta tcgccatcta tacgaacaaa agttgggcgg tcccgcccag 661 caggatgtcg tcaagccaaa gacggcgccc accaccgacg aggtggcata caaacccatt 721 aaggcagagg ctgtcaagca tcgaagctat cggcgacgtc gcccctccga ggatgaagag 781 gagcagacta agagcaaatc agacgcagcc tcggacgcca cgaagtcaac ggatcaaacg 841 gaaagcatac cagcgcaggc acatttgacc aacaacatag atgccgattc tgattttagc 901 atagacgact ccagcgatga agaagacgag aaggagaatg agaaggaaaa gaataagctg 961 tcccagatca aaaaggagga taaggacaag gctccggaaa gttcagagcc cgttaaaccc 1021 aaagaacccg aggcctcgca acaatccccc accaaaaagg atgattccaa tgccgaagtg 1081 aacgaaaagg atctacccgt gccgagagtc accaaaccgc ctgtggatcg cacactcttc 1141 tggcgcaaga ggaccgtggg cgaggtccta gcggcagcct tggctcgcta cgaggaacgc 1201 aagcgagcgc gcctccagta aaatgcatcc aattaaagtt cgagttgagg gaaaaacaaa 1261 ccagtgattt ctgtattgtc tgcttattat gctaatttca atttgtccca tgctcataaa 1321 taatttatgt gcacgccaac gctcttagca gacccttttc ggtgcaaata ttttgcataa 1381 gttgcaacag actccccagc cagcccgttt gcacttttca tctaaaacag agaacaacag 1441 caaaaaaaaa atgggtaaga agtacaaggc atgacggatg gaaccgcagg aaaagttggg 1501 tgggaaaaac cactggagga tgaggaagtg cctgaaggag cagaacgcga agatattcca 1561 tttattttgt atgacgacga cacgacgaca agtaggagag ccaaaaaata actaggacta 1621 gctcagagga acgaagctat gtataccctt aaaggttaaa caattttagg ctaatagact 1681 gttatttttt ctttttaaaa tcaatgttaa agaatttaca ccagaaatca ttgggctggg 1741 tgcccaattc gaattatgat aaaggtagac acacagcata tttgggctat aatgacatat 1801 tgatccaaac atatgtattg tacatacata ccttgctaaa tccaacacaa tgtaaataag 1861 acgatggtag gcaaaaaatt catccctatt gattttatag tgtcccgaac aaatccgcgt 1921 tgaggcagac agcttatgca gaaatgactt tttaggttta ggttcacaaa tatctcgttc 1981 actgagccgg aaactcctaa tccaagttct aatacccact gcaagggtat aaggtataaa 2041 aacggtaagg caacgtagaa acttgccaaa cgcccaaata acaaagagcc aacttggcgt 2101 tagtttattt ttttttcttt ttctttttct ttagccatcc ctttttttgt ttttgcaaca 2161 ttgttgttgc ttcattttgc cgcaaatgct gggaaatcct tttggaaaat aggtgtgccc 2221 gccgccataa aagcgaaaac caatggacca ggagggtgga gcgaagcgga ggcatcgcga 2281 aaggagaacg gaaagcagcg aaagcgcggc gagcacggct gacatggtta ggatcagtga 2341 tggacagtgt ctaggcggtt gctcccaggt actttggacc agtgtttacg accttctttg 2401 gcactgaagc ataccattat ataccatccc agactttata caaagcatac agtaatatgt 2461 gctaaaatca catgctaaac ctttaattcc aacgtactta tgtatcattg aaaacgcgaa 2521 ttctttagta ctttagtaca aagtgtagaa tgtcttaacc ttcatctgtt gcagttggtt 2581 ataatgtgtc tgtaaactaa ataaaatgca aacgaaatcg tatagc