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LOCUS NM_167299 3694 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_167299 VERSION NM_167299.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3694) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3694) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3694) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3694) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3694) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3694) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3694) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3694) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3694) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3694) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3694) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3694) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3694) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3694) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3694) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3694) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3694) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3694) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3694) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3694) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3694) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3694) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3694) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 31, 2011 this sequence version replaced NM_167299.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3694 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3694 /gene="Amun" /locus_tag="Dmel_CG2446" /gene_synonym="amun; anon-WO03040301.104; anon-WO03040301.105; anon-WO03040301.107; CG2446; Dmel\CG2446; EP1503" /map="10D6-10D7" /db_xref="FLYBASE:FBgn0030328" /db_xref="GeneID:32123" CDS 652..2304 /gene="Amun" /locus_tag="Dmel_CG2446" /gene_synonym="amun; anon-WO03040301.104; anon-WO03040301.105; anon-WO03040301.107; CG2446; Dmel\CG2446; EP1503" /note="CG2446 gene product from transcript CG2446-RB; CG2446-PB; Amun-PB" /codon_start=1 /product="amun, isoform B" /protein_id="NP_727552.1" /db_xref="FLYBASE:FBpp0073452" /db_xref="GeneID:32123" /db_xref="FLYBASE:FBgn0030328" /translation="MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQEL IRLDQWYQNELPKLIKARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAV IQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEI EGIDYTTKEYLNFVNHIQATVERLNAEVGGDTPHWSPHRVELALWSHYVANDLSPEML DDMPPPGSGASTGTGSLSTNGNSSKVLDGDDTNDGVGVDLDDESQGAGGRNTATESET ENENTNPAALTPLQSGEAKNNAAAVGAALQDGDSNFVSNDSTSQEPIIDDNDGTTQTT ATTSTEDGEPIALDIGIGIGSSGTPLASDSESNQEAPPKTNSLPILTPTQHSSQNQNQ KQSPSQPHKTNNSITNNGQPAPLAEEEAVTAAPQPASKATAAPANGNGNGNGVLGDED EDEAEDEEEDELDEEEDNEAELEADESNSSNGIVRDSKLQQLAANKAVDAVSPVAAGA DSAPAIGQKRTALHCDMELKNAGGVGVGVGEKSPDLKKLRSE" ORIGIN 1 acattcgggc accgagtgcg ggcgagatag aacgacaact cctgttcccg gttcgtcgtc 61 gttcgtcatt cccatattcg cttctcgtat tccctcccat tcccattcgc aatcccaatt 121 cccaattccc gtcacacgag ttagcagcac atcgcacagc tgcatcgctc cgctccgatc 181 ctttttaatt ttttgttgtg ccttcggtgg cgtgctcatt tcgagaacag agtaacccct 241 ttttatttgt cagttgtcaa cggcgcccct gcaggcagaa agcagaaact gaaacagcag 301 aggaagaaga agaagcagca cagcacgggc acagcacgaa gcacgcagca cagcacaagc 361 acagaggcga agcgaagcaa agcaaagcag aggcaacaca gaaaaacagc aaagcattgg 421 agtagttgtt tggatgtgga cggaaaggaa gactggcggc gactaactaa aagcagtacg 481 ttgacaggag cagctcggaa cggacaggaa aagcaggaga ctaaacacca gccggtcact 541 tgcggatcag ccaacgtcct gggccccaag gcgatagata ccacgataag gagatacagc 601 gataccacca atcattagca ggcgacaacg acacatccgc atccgcagaa gatgtccaac 661 ggcaaggcga cggtctcgtt cttcgagacc gggagcacca aacagttcga gtactgctac 721 cagctctatc cccaggttct taagctaaag gccgagaagc gctgcaagaa gccgcaagag 781 ctgatccgcc tggatcagtg gtatcagaat gaactgccca aattgattaa ggcacgcggc 841 aaggacgcgc atatggtata cgatgagctc gtccagtcga tgaagtggaa gcagtcgcgc 901 ggcaaattct atccgcagct atcctacctg gtcaaggtca acacaccgcg cgccgtcatc 961 caggagacaa agaaggcctt ccgcaagctg cccaatctgg agcaggcgat cacagcttta 1021 tcgaacctca agggcgttgg caccacaatg gccagtgcac tgctggcagc cgcagctccc 1081 gattcggcac cattcatggc cgacgagtgc ctgatggcca taccagagat cgagggcatc 1141 gattacacca ccaaggagta cctcaacttc gtcaatcaca ttcaggccac cgtggagcgc 1201 ctcaatgcgg aggtgggcgg ggatacgccg cactggtcgc ctcatcgcgt ggagctggcc 1261 ctctggtcac actatgtggc caatgatctc agtcccgaga tgctcgacga tatgccgccg 1321 cctggatccg gcgcctccac tggcaccggt tcactcagca caaacggcaa cagcagcaag 1381 gtgctcgatg gcgacgatac caacgatggt gtgggtgttg atttggacga cgaaagccaa 1441 ggagcaggcg gtcgcaacac tgctacagaa tcggagacag agaatgagaa caccaacccg 1501 gctgctctga cgcctctaca gtcgggcgag gccaagaaca acgcagctgc cgttggcgcc 1561 gccctgcagg acggtgactc caactttgtt tcgaacgatt ccacctccca ggagccgatc 1621 atcgatgaca acgatggcac cacacagaca acggccacca cttccacaga ggacggtgag 1681 cccatcgccc tagacattgg cattggcatc ggttcgagtg gaacaccgct cgcctcggac 1741 tctgaaagca atcaggaggc gccgcccaag accaacagcc tgcccatcct gactcccaca 1801 cagcactcga gccagaatca gaatcaaaag cagtcgccga gccagcccca caaaactaac 1861 aattcgatca ccaacaacgg tcagcctgct cctttggcag aagaggaagc ggttacagca 1921 gcaccacagc cagccagcaa agcgactgca gcaccagcca atggaaatgg taacgggaac 1981 ggcgtcctgg gcgacgagga tgaggatgag gcggaggacg aggaggaaga tgagctggac 2041 gaggaggagg ataatgaggc ggagctagag gctgacgaga gcaatagcag caacggcatt 2101 gtgagggaca gtaaactgca gcagctggcg gcgaacaagg cggtggatgc ggtttcaccg 2161 gtagcagcgg gtgcagactc ggcaccagcc attggacaga agcgtactgc cctgcactgc 2221 gatatggagc tgaagaacgc cggcggagtg ggtgtgggcg tgggggagaa gtcaccggat 2281 ctaaagaaac tgcgcagcga atgaggcgga ggtgaggaaa cgaaatacgg atacggatgc 2341 ggatgcgggt cagaaacggg gatcggttcg gctcggcacg tttcggttcg ccgcgtatcc 2401 ggtggaaaga catatgtatg tagtgcagtt gagtcgacat agagacatag agcaacatta 2461 cctacacttt accacaacaa cattcaagaa attctactat taagcaacta actatacata 2521 catataatat attatatata tatatatata cacatatata tatatatata tacaacatat 2581 aacgagatgc gaacacccaa cacactccac tctcatacac acaacacaga cacacacaac 2641 ccgacataac atgaacataa ccgatcagat cagagcggaa tataggatcc cgatccagaa 2701 ggcagtaagc agcaccacaa acaacatttc aatagcatag aaagcgcgcc aagatgaaga 2761 atcagaagaa tccgatcaag aatccgaaga acaagcagca gaatcagcag caacagagag 2821 ttcagaatgc agcgttaacg taatttaact aaaacgaaaa gcaaatgcat acatgaatag 2881 taactacaaa acaagatcag atggaaatcg atatttttac acagtcaaaa ggaacattta 2941 aatataaaga aatttacaaa tgccgcagtt gcccactaca tacaaaaaac aaaaaaaaaa 3001 tatgaaaaat aaaaagcgaa agaaaacaaa atgattaaga tggaaacaac aataattata 3061 ataaacagaa acgtaattta tatacatagg tatttaaatt taataataaa tcaaaacttg 3121 tcgtataaac caagcccccc accaccaact ccaccaccac ccccttcgac cgtcgacccg 3181 cagcaactcg cgctctctct ctatctctct cactcaaaac acgccgcaca cagaatacac 3241 cccctcccca cacacataaa cacacaaaca ctcggaagaa acaaaacaaa acaaaactca 3301 tttcaacact aagaaatttt tgtggtcgta attataataa tataatttat attatgtgta 3361 aaactttttt ttaactttac atatactgaa ttttttataa tttatacgat aatcacgttt 3421 catttgattt ccaaaagaga aaaaagaaga tacggaagca tacggcccgc atcttaattg 3481 cacccgacgc aggtcgtccg atctccgcgt ggtttgggtt gccggtaccg ggtggtttcc 3541 ccgatatcca cgacccatac cactcgcaga tcggtcggaa ctttgaaagt aacaacacat 3601 ctgaaaatta taatcatttt tattattagt agcataagtg cgaataaaat gtgaaatatt 3661 aagaaaacac ggcataaaac tgaaaacatc ccac