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LOCUS NM_167233 2352 bp mRNA linear INV 26-DEC-2023 A (CG32687), mRNA. ACCESSION NM_167233 VERSION NM_167233.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2352) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2352) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2352) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2352) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2352) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2352) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2352) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2352) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2352) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2352) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2352) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2352) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2352) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2352) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2352) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2352) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2352) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2352) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2352) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2352) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2352) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2352) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2352) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_167233.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2352 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2352 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /map="9D2-9D2" /db_xref="FLYBASE:FBgn0052687" /db_xref="GeneID:31980" CDS 387..1520 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="CG32687 gene product from transcript CG32687-RA; CG32687-PA" /codon_start=1 /product="uncharacterized protein, isoform A" /protein_id="NP_727428.1" /db_xref="FLYBASE:FBpp0071392" /db_xref="GeneID:31980" /db_xref="FLYBASE:FBgn0052687" /translation="MEVYTSDSSDTDSREQKTLDFGRMSLDLVTLEDHLASPQKALLK SSGDIETMLLNHNRLVGLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNN LLTNASLPKSLLTKMANGNGNGNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYL YLGGNKISSVSKDIWKMQSLHVLSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPT SIARLKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLE LAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKY RVPLLQYLCSSKCIEPEQPAARGSSVPAASASSGFMMRKVLLG" misc_feature <582..>1163 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 600..662 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 666..785 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 786..854 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 855..923 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 924..992 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 993..1061 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1062..1130 /gene="CG32687" /locus_tag="Dmel_CG32687" /gene_synonym="BcDNA:RH29237; CG2143; CG2892; Cg32687; CT6984; CT7080; Dmel\CG32687" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" ORIGIN 1 gatatagtac tcaatataaa gtcgtactgt cggcttggcg atccgaactg aaaagctagc 61 cgtcgcataa gcgaaacaaa aaccaaacca cttggcattc gcgctgggcg agctgaacag 121 tgcgagcgtc aagtgtcgcg acggtttttt atataaatta attcatattt tccgctgaca 181 tcccatacca caccgcacca caccacacca caccatacta tacacattca catctgtttt 241 ttgttttcgt ttgcgttgcg gttttttttt gtgtgtgcgc gagagcgttt cgatttggat 301 catctcgaga tcagatcagt tgtaaacaaa gagatcgtgc gtccagtcaa tccagtgagc 361 agcaagtcac caggagaaga tcagccatgg aggtgtacac gtcggacagt tcggacacgg 421 attcgcggga gcagaagaca ctggactttg gccgtatgag cctggacctg gtcacgctgg 481 aggatcacct ggcctcgccg cagaaggctc tgctcaagtc cagtggcgac atcgagacca 541 tgctgctcaa tcacaatcga ttggtcggct tgccccgtct actgctgcag ttcggcaatc 601 tgaagattct ggatctcagc tcgaatgcaa tcaccacgct gccggatgcc gtctgccaac 661 tgccgctggt caccctgata gccaagaata acctgctgac caatgcctcg ctgcccaaat 721 cgctgctcac caaaatggcc aatggcaatg gcaacggcaa tgccaccggt ggcaccaact 781 ccacgctcaa ggagctcaat ctgagtggca atcaattaac ccactttccg gaacaggtca 841 ccgagctgcg ccacctcaag tacctctatc tgggcggtaa caagatctcc agcgtctcga 901 aggatatctg gaagatgcaa agtctgcatg tgctgtccct cggcggcaat ctaatcagcg 961 aagttcccga ggcggtgggt tcccttaatc agctgcaggc tctcgtcctg tgcgacaatc 1021 tgatcgagat tctgccgacc agcatcgccc gactgaagaa cctcaagtcg ctgctgctgc 1081 acaagaaccg tctgcgtcat cttcccaagg acatcgtggc actgaagaat ctgactgagc 1141 tgagcctacg tgacaatccg ctggtggtgc gcttcgtgca ggacatggcg ctgaagccac 1201 ccaccctcct cgagctggct ggtcgcatgg tgaaggccag tggccagaga cccggaccct 1261 atgacatccc caggacactg gccgagtatt tgaacagcgc caattgctgc gtgaatccca 1321 actgcaaggg cgtcttcttc gacaaccggg tggagcacat caagttcgtg gacttttgcg 1381 gaaagtaccg tgtaccattg ctgcagtacc tctgctcctc caagtgcatc gagccagagc 1441 agccggcggc gcgtggatca tccgttccgg cggcgagcgc cagcagcgga ttcatgatgc 1501 gcaaggtgct gctgggctag ccggcattcc ggcccggccc ggcccactcc ggctcctggg 1561 gccataacca tatattgtcc gggagcgcga gcggagcatc gaccgatctg gtatcggatt 1621 tggagcggac acagagatac gaaatcgata tcggattggg aatcggaggc ggaagcggta 1681 gcggaacttg ggagcgaaac ggaacggaaa cgagagctta agcggaaatg gttggatgga 1741 tggatccacg cgttccgagg aaccgaggtg tccgccaacc accgccgctc gccgggattc 1801 ccattggctt cttcacacgt taccaatttg aactagtttg ctaagtgatt acacgacctg 1861 tttgcttgct cgccttgcgt gccaatttct gtgtttctgt ttgcttgtta ctcacacacc 1921 tacacaatct ataccaaaga aactcgactg gctttcactg ggcaaaaaca aatagaaaag 1981 gattcgattg gcttgcaaag cattcggcga ttaaaagcgt cgatatgtca gattgcacta 2041 gtccgacgaa cttatctagc cccataaatt gagttagtaa ccaaaaacat cagcacaact 2101 gttaaatatt tcacaaacta taactgcaac cacaatcaaa ttaacgcccg attctattcg 2161 ttcaaaagca agtcatttca tttaaaatgc caacaaaatg accccaatca ggtattccaa 2221 caagttcctt taaatgtcct ttgtcctgga atacctcaac cttacacaat tataattaaa 2281 gctttgctca attgcccaaa atttataata aaaagtggac aaaaaccttt agcaacatgc 2341 taagctatcc ct