Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_167192 4208 bp mRNA linear INV 26-DEC-2023 B (CG32700), mRNA. ACCESSION NM_167192 VERSION NM_167192.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 4208) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4208) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 4208) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 4208) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 4208) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 4208) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 4208) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 4208) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 4208) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 4208) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 4208) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 4208) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 4208) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 4208) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 4208) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 4208) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 4208) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 4208) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 4208) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 4208) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 4208) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 4208) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 4208) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_167192.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4208 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..4208 /gene="CG32700" /locus_tag="Dmel_CG32700" /old_locus_tag="Dmel_CR43497" /gene_synonym="BcDNA:GH19985; CG12651; CG12652; CG18429; CG2994; CR43497; Dmel\CG32700; Tes89" /map="8E4-8E7" /db_xref="FLYBASE:FBgn0267253" /db_xref="GeneID:31896" CDS 442..1098 /gene="CG32700" /locus_tag="Dmel_CG32700" /old_locus_tag="Dmel_CR43497" /gene_synonym="BcDNA:GH19985; CG12651; CG12652; CG18429; CG2994; CR43497; Dmel\CG32700; Tes89" /note="CG32700 gene product from transcript CG32700-RB; CG32700-PB" /codon_start=1 /product="uncharacterized protein, isoform B" /protein_id="NP_727345.1" /db_xref="FLYBASE:FBpp0071309" /db_xref="GeneID:31896" /db_xref="FLYBASE:FBgn0267253" /translation="MRRSSFTPVFNLSTQEPLIVVEESHTAEDGDDLEGAAGGCDPTA AGTRRSNSDDSEPDSPVNPYLLCPFPDMQQRRKHSLPSLQITEGITASQVRRLSEVGG ETGGLSPKEVEFLATLSQKANPTAGGRRHSVVTISAVPPTLFGRNRRESISGVSFSGS RRGSVIAGPPLTDHRGSVHNLQLDIMDGIVQQRKTRSGSGVWTAPVLQEADSNVPVQT " ORIGIN 1 tcattcgtca acagactctc gtgcggttcg gttctcagcc tcagcctttg aattcagcat 61 actcacatca cagtcgcaag tcactggtca ctggtcacag ttcacagtca cgcagttact 121 gcctttgccc ggttttcgat tttcgaaaga tattcgaaag tgctgaacat acataatttt 181 tttttttttg gtttttgtgc taatctaaga aattgagtat atatacataa atatacacat 241 aaagtgcaat agcgttccga aataccattt ttcaattcga atacaaacga ccgagccgaa 301 gtgaaagagt gtgtgtggca aatatttaaa tcccattcgc gttccgattc ggaggaggat 361 ttggcggaga aagcttgaga cacagagaac acaccgcagt caaaggtgaa gtaagcaaag 421 taattgaagc agccagaaaa aatgcgtcgc tcctcgttca cgcccgtctt caacttgagc 481 acccaggagc cgctgatcgt ggtggaggaa tcgcacaccg ccgaggatgg tgatgacttg 541 gagggtgccg ccggtggatg tgatcccact gcggccggga cacgccgttc caacagcgat 601 gactccgaac cggactcgcc ggtgaatccc tatctgcttt gcccatttcc cgatatgcaa 661 cagcgacgca agcattcgct gccatcgctt caaattaccg agggcatcac cgccagtcag 721 gtgcgtcgat tgtcggaggt gggcggcgag actggcgggc tcagtcccaa ggaggtcgag 781 tttctggcca cgctctcgca gaaggccaat ccgacggccg gtggacgtag gcactcggtg 841 gtcaccatat cggcggtgcc gccaacgctt ttcggacgca atcgccgcga gtccatttcc 901 ggtgtatcct tcagtggcag tcgccgtggc agcgtcatcg ccggaccgcc attaaccgat 961 caccgcggca gcgtgcacaa cttgcagctg gacatcatgg atggcatcgt ccagcagcgg 1021 aagacgcgca gcggaagcgg cgtctggaca gcgcccgttc tgcaggaggc cgatagcaat 1081 gtgcccgtgc agacataagc agctgaagga cacgcacgat agcaaggggg gaaaaggacg 1141 aaaaatggac gaatgtggag aaggatggat ggatgaatgg atggctggat ggttggatgg 1201 ggatttcttc gacagatgga cggatgaatt cggttggaca ctgggcaata caaacaacca 1261 aatgcctgga aactccgaac caactcgaac tgcaactgga cctttattaa catttcgtgc 1321 tttccacccg acaaaggaaa aaaaaaacac acccctcaca ctctgccccc ctacgatttt 1381 ccaccgggaa attgcttttc gcggctgccg cataaagcaa acaaacaaac cacaaaaacc 1441 gcatgaaaca aaaaaaagaa aaaaaaatcg catggaaaat ggcaaagaat ggtaggtgga 1501 aactgaagat aaaaaaacga aatacacaca gaaaaaaaaa gaacaggaaa atataaaact 1561 tcgaaaatga aaaactgcag ttaaacaaag agcgagatga caagaccaat ttaagatgaa 1621 aagaatgggc ggaaaacgcg aaaaggcgga caaataaagc aaaacgaacg tgaaagagaa 1681 ccaaaaaaaa aaaccaactg agaaaaacac atcgtgacca ttttgattgc cagcaatttt 1741 ggttaacacc tgtgccatgt gccatgtgcc acgcccacaa ctgtcgcccg ctccccaaag 1801 acacatcgcc cacaattacg acttaaaaat ggacacatcc tccctatgca aggacaattg 1861 caaataatat ttaattggtg tgttaaggac gaaaggacaa caggaaacca aagatagcgc 1921 aacactcgat acccatcctc gaaataatta aaattcccaa gtggtcaaaa aaaaaaaaaa 1981 aaaaaaacag aacaactacc caaaacgttc cattatcaat cgatttcaag tgaacacgca 2041 actcaatgta atcagtttat aaaataaaac aaaaaaacac atgaaattaa atcaatatat 2101 tgtatattca ggaattgata tattagtgaa taactagcga gaacgaaaaa agtggaaaaa 2161 gagcgactta aaaaataact atttacttag gacctagtta ctcctcattt tttttttttt 2221 ttggatgttg tgtagaaccg tcgtgaacca ccgcatgaaa gaaaaccacc aaaatgaaaa 2281 ctaactaata tatatatgta caatcccaca gactatttac ctatagaaca gaatccaatg 2341 caattagaaa gtggaaatcc tcaggtgctt ttcgaactag ctcgtttttc catttaccag 2401 ttaccattta accctgattg attcaatcaa ccagcgcaat caaaattgaa aagaattgac 2461 aaatatacca tggtacctaa aaacaaaaat caagcaaaaa aaaccaagca acattaaaac 2521 attagtgaaa actaactaaa caatgaaaat gaaatctagg ctaagagcaa aacgatttat 2581 cgccaaacca gcaataaaac gatgtggaaa ttcaactatt tttgaactgg gctggctgct 2641 tgcccagccc agcaggtcag ccagccttta gttcgagtag accaggcccg aaatccaata 2701 accccaatta ataataataa tactactaca tacatgacga acaacttgag aatttgatga 2761 tttcttcaat tttatttcgg cttttgtgtg tgtgtggcat gtaacgtagt gcaattcgat 2821 gaaatcgaat atttggaaaa actgtctcgt ttaaaaatca tctgaaagta ttcattcata 2881 ttttgcaaac agtacttgtt ccttcttttt tttagtgcac atataattgg ttttttaaat 2941 ttgctaatat tgcacaattt gttttatttt cttctctata aaattatagg aaaaatgtaa 3001 ttaatttagg tttatattta caaaagattt gggtattatt tttgcaccct tgattaaaaa 3061 tggaaatatg aattgaagag atcgccgcac tctcaagtcg ttgaagtttt cttttatata 3121 agtctcgatg ttgttgtttc tcatagagtg tacacataaa cataggatat atgtcctcgt 3181 cataaatata tttagaatgt acataacaaa atactcgaat atttaattta ctctctgtgt 3241 tcctctattc gaaccggaaa cgagtttgcg tcttcttagc actccaggaa aatgaaggaa 3301 aatgccccaa ttttcaatat gaaatgggtg gagaattaaa gagacccgta actaaaaatt 3361 tccctttcct ctaatttgac ctgagcaaaa tgtcgctgga cgacgaagga aaaatacaaa 3421 agatgtgtgt aaaacaaaac tagagaattt ttttattatt aaacatagtc aaggataatc 3481 aacacgagat gatggagaat ttggatgatg atggcaaaaa tgatgatgag aatgcaagga 3541 tgtaaaagat atatttatag aaatgagcta tatgtataca taatgacaga ttgattatat 3601 gattatatag taacttattg tcacaacgca agagcaatca atgtttaact ttattaaatg 3661 ttacaaagag ttttaaatat taaatatact taatgaaata tatacagata tacctatata 3721 ttgcagatta tattctatac atataatttg taggtgaagc tgagatgaaa atgaataaaa 3781 aatactagtc gtactcgtag ttcgccatta tgtttgccaa aaatcggaga taaatgtaag 3841 aaaagttgtg tcagccattg cagaaattcg agggaaatta ttgtatttag caaaaggttt 3901 tccagaatct cataaaactc catttgtaaa tctattgtac ccgccaaata aataatcgtg 3961 aaccacaatc cttatattca aaataagcaa accacaaaag aagaaatttt ggaaaggcac 4021 ggtttgaaaa aaaaaaccgg gctggcactc tttctaattt tttttttgtt agcatttatt 4081 tcaaaatcgt tatttcttgt gtcttagcaa taataatata attaaaatgt gtgtgtcgct 4141 ctgtaactgt ctctattgtg tttgagatta ctcgtatctt ataatgaata ttattactaa 4201 actaaagc