Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_167149 2277 bp mRNA linear INV 26-DEC-2023 B (Trxr1), mRNA. ACCESSION NM_167149 VERSION NM_167149.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2277) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2277) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2277) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2277) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2277) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2277) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2277) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2277) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2277) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2277) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2277) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2277) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2277) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2277) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2277) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2277) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2277) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2277) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2277) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2277) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2277) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2277) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2277) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_167149.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2277 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2277 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /note="Thioredoxin reductase 1" /map="7D22-7E1" /db_xref="FLYBASE:FBgn0020653" /db_xref="GeneID:31760" CDS 148..1938 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /EC_number="1.-.-.-" /EC_number="1.8.1.-" /EC_number="1.8.1.9" /note="CG2151 gene product from transcript CG2151-RB; CG2151-PB; Trxr1-PB; thioredoxin reductase; disulfide reductase; glutathione reductase; thioredoxin reductase-1" /codon_start=1 /product="thioredoxin reductase 1, isoform B" /protein_id="NP_727251.1" /db_xref="FLYBASE:FBpp0071116" /db_xref="GeneID:31760" /db_xref="FLYBASE:FBgn0020653" /translation="MNLCNSRFSVTFVRQCSTILTSPSAGIIQNRGSLTTKVPHWISS SLSCAHHTFQRTMNLTGQRGSRDSTGATGGNAPAGSGAGAPPPFQHPHCDRAAMYAQP VRKMSTKGGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGG TCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWV TRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAV EYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQM AELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEEAEDVYDTVLWAIGR KGLVDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLL ARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEF FIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTV GIHPTTAEEFTRLAITKRSGLDPTPASCCS" misc_feature 322..>627 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /note="FAD dependent oxidoreductase; Region: DAO; cl40741" /db_xref="CDD:477422" misc_feature 484..1932 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /note="thioredoxin and glutathione reductase selenoprotein; Region: TGR; TIGR01438" /db_xref="CDD:273624" ORIGIN 1 tcgcagcatt cccggccgaa ccagcgaacg tgtttgtgtt gtgtgttccg ccgtcatttt 61 tctgcaccct tttcgcgaat agtttcgttt cgcctccagc tggtagagtg aaacgccaaa 121 cgttgaagaa ggggaaaggc caacaagatg aacttgtgca attcgagatt ctccgttacg 181 ttcgtgcggc agtgctcgac gattttaacg tctccttcgg ctggcattat acaaaacaga 241 ggctcactga caacaaaggt tccccattgg atttccagta gtctcagctg tgcccatcac 301 acgtttcagc gaactatgaa cttgacggga cagcgaggat cacgcgacag tactggagct 361 accggtggga atgctccagc cggatccggt gccggcgcac caccaccctt ccagcatcca 421 cattgcgaca gggcggccat gtacgcgcaa ccggtgcgaa agatgagcac caaaggagga 481 tcctacgact acgaccttat tgtgattgga ggcggctcag ctggcctggc ctgcgccaag 541 gaggcagtcc tcaatggagc ccgtgtggcc tgtctggatt tcgttaagcc cacgcccact 601 ctgggcacca agtggggcgt tggcggcacc tgcgtgaacg tgggctgcat tcccaagaag 661 ctgatgcacc aggcctccct tctgggcgag gctgtccatg aggcggccgc ctacggctgg 721 aacgtggacg aaaagatcaa gccagactgg cacaagctgg tgcagtccgt acagaaccac 781 atcaagtccg tcaactgggt gacccgtgtg gatctgcgcg acaagaaagt ggagtacatc 841 aatggactgg gctccttcgt ggactcgcac acactgctgg ccaagctgaa gagcggcgag 901 cgcacaatca ccgcccagac cttcgtcatt gccgttggcg gccgaccacg ttatccggat 961 attcccggtg ctgtcgagta tggcatcacc agcgatgatc tgttcagttt ggaccgcgag 1021 cccggcaaga ccctggtggt gggagctggc tacattggct tggagtgcgc tggattcctg 1081 aagggtctcg gctacgagcc cactgtgatg gtgcgttcta ttgtgctgcg tggcttcgac 1141 cagcagatgg ccgagctggt ggcagcctcg atggaggagc gtggcattcc cttcctccgc 1201 aagacggtgc cgctgtccgt ggaaaagcag gatgatggca agctgctcgt gaagtacaag 1261 aacgtggaga ccggcgagga ggccgaggat gtttacgaca ccgttctgtg ggccatcggc 1321 cgcaagggtc tggtggacga tctgaacctg cccaatgccg gcgtgactgt gcagaaggac 1381 aagattccag tggactccca ggaggctacc aatgtggcaa acatctacgc tgtcggcgat 1441 atcatctatg gcaagccaga gctgacgccc gtcgccgttt tggctggccg tttgctggcc 1501 cgccgcctgt acggaggatc tacccagcgc atggactaca aggatgtggc caccaccgtt 1561 ttcacgcccc tggagtacgc ctgcgtcggc ctgagcgagg aggatgccgt caagcagttc 1621 ggagccgatg agatcgaggt gttccacggc tactacaagc ccacggagtt cttcattccc 1681 cagaagagcg tgcgctactg ctacttgaag gctgtggccg agcgccatgg tgaccagcgc 1741 gtctatggac tgcactatat tggcccggtg gccggtgagg ttatccaggg attcgctgcc 1801 gctttgaagt ctggcctgac tattaacacg ctgatcaaca ccgtgggcat ccatcccact 1861 accgccgaag aattcacccg gctggccatc accaagcgct ccggactgga ccccacgccg 1921 gccagctgct gcagctaaag cgggaacgca gctcagccgc ctgggacgtg tcgaagccgc 1981 ttgctccacc cgaaatcccg tagatgaatg gttgttgtcg cggcccagcg atcgatgagt 2041 tcaatagttc cgtttcgttt ccacaattaa cacccaacac aatagctctg cgcaagggag 2101 gggcactggg cagcgatggc gggtggaacg acaccagtgg aactacccgc gcgaccagcc 2161 caacccacga ctgctgcgcc gccgacatgc actcaaaatt ttgaatttgt ttgaacctat 2221 gaaattaact atgaaatccc ctaaatgtac ggttgaagaa tataattttt caccaac