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LOCUS NM_166950 3066 bp mRNA linear INV 26-DEC-2023 D (CG2694), mRNA. ACCESSION NM_166950 VERSION NM_166950.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3066) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3066) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3066) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3066) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3066) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3066) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3066) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3066) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3066) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3066) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3066) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3066) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3066) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3066) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3066) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3066) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3066) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3066) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3066) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3066) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3066) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3066) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3066) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_166950.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3066 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3066 /gene="CG2694" /locus_tag="Dmel_CG2694" /gene_synonym="Dmel\CG2694; EG:100G10.8; EG:95B7.10" /map="3B3-3B3" /db_xref="FLYBASE:FBgn0024991" /db_xref="GeneID:31260" CDS 52..2520 /gene="CG2694" /locus_tag="Dmel_CG2694" /gene_synonym="Dmel\CG2694; EG:100G10.8; EG:95B7.10" /note="CG2694 gene product from transcript CG2694-RD; CG2694-PD" /codon_start=1 /product="uncharacterized protein, isoform D" /protein_id="NP_726828.2" /db_xref="FLYBASE:FBpp0302769" /db_xref="GeneID:31260" /db_xref="FLYBASE:FBgn0024991" /translation="MAFESSAQQLKIPDERMNAQLNNSGVQVGCEPVASQIPGALIRI SDDFLTSTPGEGQKDVPTTESTKLQNLHSRKLWDIGPGSIHGEGKTPKLAVKRLWPGC GDDEPNAKKALAFEQFVSIYDRKITPLPQIEKSQSRKQNNEFDFAFEMSAKPSANSED ILLAGLLQDWKLEDHDNAQIGCDPAPMPASQSELALVHLKLPCKTPQSQPQVEAHQNA SVATVNSDSGSIILVSDDSSATACSFLHSSELCNSSDFEELRKEFTEDSSYIDLSLDS GSSNPSAIETDMKTHKLGAKRRSPQTKGDVLAKKISYQNLNEMNISSNQPVVTRSGRV VVSRPNQQFDYSSSSQSKGDGEEDSDEVSLDADDDEYEGEDFDQLKWTERKRRSFRNT SLAFSPDGSRSSPEATPPMVYVELGGKIVIIRDKPQPNIVLEDDKELKTQMHKFLGLI PSRRKLFDPSEYNMDRGDIEMDVYVPTSLVTNPSPRSSPSPVTPSARSRIWQETTPTS ICSNLNLSHTYTPTVNELQTKHMDDSIIQVNLDCFQKKTPDSVKEPIDLSELPSQKQL ATNCRRHKSCVARLERHPHFYGFVQSLRPSVSLNMCHPLALTFRRTNFQQSKVALAKV LFNMFNHAVFHCGLQVPIVWKHAMKKRWKCELGFDASGRRTAQILLLHSIDTAAELIY LLLHEMCHVAAFLFNRELGHGDNCRRWTYQAKMAFPEVPALMECIASFMYTCSMCSRS SYGLADLKSYNIRCYYCQFEVSVKPVSKANMHEGARSDRTMTPFKCFIRDKYLKLGAE GGVTHSSKMALLNEMFAKMTAATE" misc_feature 1912..2343 /gene="CG2694" /locus_tag="Dmel_CG2694" /gene_synonym="Dmel\CG2694; EG:100G10.8; EG:95B7.10" /note="SprT homologues; Region: SprT; smart00731" /db_xref="CDD:214794" ORIGIN 1 ttattaccgc cacataggta acgcggcaac agacgcgaaa ttgccagtac gatggcattc 61 gagagctctg cacagcagtt aaagattccg gacgaaagga tgaatgcaca gttgaacaat 121 agtggcgtac aggtaggatg tgaaccagtc gccagccaga taccgggcgc gctgataagg 181 atttcagacg atttccttac ctccacgccg ggagagggcc agaaggacgt gcccaccacg 241 gagagcacaa aattgcagaa cctgcacagc cgcaagctgt gggacatagg tcctggttcc 301 attcatggcg aggggaagac accgaagttg gccgtgaagc gtctctggcc aggctgcggg 361 gacgacgagc cgaacgccaa aaaagcactg gcattcgagc aatttgtgtc gatatacgat 421 aggaaaataa cgccgctacc tcaaatcgaa aaaagtcaaa gccgcaaaca aaataacgaa 481 ttcgatttcg cattcgaaat gtccgcgaag ccaagtgcca attcggagga catccttctg 541 gccggcctgc tccaggactg gaaactagag gaccatgaca acgcacagat tggctgcgac 601 ccagcgccca tgccggccag tcaatccgaa ttggcactgg ttcatttgaa gttgccgtgc 661 aagacgcccc aatcccagcc ccaggtggaa gcccatcaaa atgcttcagt tgcgaccgtc 721 aacagcgaca gcggaagcat aatactagtg tccgatgatt cctcagctac ggcgtgcagc 781 ttccttcact cgtccgagct ctgtaactcc tccgacttcg aagaactgcg caaggagttc 841 accgaggact cctcatacat cgatctctca cttgattcgg gcagcagcaa tcctagtgcc 901 attgaaaccg acatgaagac acacaaactg ggcgcgaagc gcagatcgcc gcagaccaag 961 ggcgatgtgt tggccaaaaa gatttcttac cagaatctga acgagatgaa catctcctcg 1021 aatcaacccg tggtgacgcg cagtggtcgt gttgtggtct cacgtccgaa ccagcagttt 1081 gactactcct cctcctccca gtcgaagggc gatggcgagg aggactccga cgaggtgtca 1141 ctggatgccg acgacgatga gtatgaggga gaagatttcg atcagctcaa gtggacggag 1201 cgcaaacggc gtagctttag aaacaccagc ttagccttca gccccgatgg cagccgctcg 1261 tcgccggagg caacacctcc gatggtctat gtcgaattgg gcggcaaaat cgtgatcatt 1321 agggataaac cacagcccaa tatcgttctg gaagacgata aggaactcaa gacgcagatg 1381 cacaagtttt tgggtctgat tccatcacgt cgcaagctct tcgatccgtc ggaatacaat 1441 atggatcggg gggatattga gatggatgtg tacgtaccga ccagtcttgt taccaatcca 1501 tcacctaggt cctcaccaag cccagttact ccatcggcca ggtcacgaat atggcaggaa 1561 acaacgccga catccatttg ctccaacttg aatttatcgc atacctacac accgaccgtg 1621 aatgagctcc agactaagca catggatgac tctataatcc aggtgaattt ggactgcttt 1681 cagaagaaaa caccagactc tgtcaaggag cccattgatc taagcgagct tcccagccaa 1741 aagcaactag ccaccaactg ccgccgccac aagagctgtg tagcccgcct ggagcggcac 1801 ccacatttct acggtttcgt ccagtcgctc agaccgtcag tctcgctcaa catgtgccat 1861 ccgctggccc tcaccttccg gcggaccaat ttccagcaat ctaaggtggc actggccaag 1921 gttctgttca acatgttcaa tcacgcggtc ttccactgtg gcctgcaggt gcccattgtt 1981 tggaagcacg caatgaagaa gcgctggaaa tgcgagcttg gcttcgacgc ctccggcagg 2041 cgcacagcac agatcctgct tctgcacagc atagacactg cggccgagct tatctatctc 2101 ctgctgcacg agatgtgcca tgtggcggct ttcctgttca accgggagtt gggtcacggc 2161 gacaactgcc gcagatggac ctaccaggcg aagatggcct ttccggaggt gcccgccctc 2221 atggagtgca tagctagctt catgtatacg tgcagcatgt gcagccgttc ctcctacggc 2281 ttggccgact tgaaatcgta caacatacgc tgctactact gccagttcga ggtgagcgtg 2341 aagcccgtta gcaaggcgaa catgcacgag ggcgcccgtt ccgatcggac gatgacaccg 2401 ttcaagtgtt tcatccgtga caagtatttg aagctgggcg cggagggggg cgtcacacac 2461 tcctcgaaga tggcgctact caacgaaatg ttcgcgaaga tgacagccgc cacggaatag 2521 ctggcagctg tctagcggct agcacacaac ttgaagaata tattttataa gtactatatg 2581 aacaaccatg gaaggcggcc ccatcaaaat ggagcagcct ccagtgaaaa cgaacacgct 2641 gtgacctact ttatatacct acctacattt tatacaaact tctataacct gtacaatggc 2701 gctatatggg atggggggct ccacggagcc ccagaatccc gagaaggcgt tcgtcagcta 2761 gtctacgtgt taactagtat atacttttat gtttaactaa caaattacat gtgaatacta 2821 ctacagtaag tctcgtcgga acgctggtgg ctattgaaat agcatgtcgc tgtttttttt 2881 ctacggaatc aaatgagaaa tcaaaacaat ttaatatgag aaaccatcat agtcgcatgt 2941 ttgaagaaat ggaaggcatt gtttgtttgt ttttgtgaga attttctgtt tgccaacttc 3001 ttgttaatgg caccccaaaa atgaaaacga caattataca aatgcaaata cagatacacc 3061 aatttt