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LOCUS NM_166949 3075 bp mRNA linear INV 26-DEC-2023 A (CG2694), mRNA. ACCESSION NM_166949 VERSION NM_166949.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3075) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3075) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3075) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3075) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3075) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3075) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3075) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3075) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3075) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3075) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3075) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3075) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3075) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3075) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3075) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3075) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3075) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3075) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3075) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3075) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3075) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3075) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3075) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_166949.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3075 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3075 /gene="CG2694" /locus_tag="Dmel_CG2694" /gene_synonym="Dmel\CG2694; EG:100G10.8; EG:95B7.10" /map="3B3-3B3" /db_xref="FLYBASE:FBgn0024991" /db_xref="GeneID:31260" CDS 52..2529 /gene="CG2694" /locus_tag="Dmel_CG2694" /gene_synonym="Dmel\CG2694; EG:100G10.8; EG:95B7.10" /note="CG2694 gene product from transcript CG2694-RA; CG2694-PA" /codon_start=1 /product="uncharacterized protein, isoform A" /protein_id="NP_726827.1" /db_xref="FLYBASE:FBpp0070459" /db_xref="GeneID:31260" /db_xref="FLYBASE:FBgn0024991" /translation="MAFESSAQQLKIPDERMNAQLNNSGVQASQSHVLFTPNQIPGAL IRISDDFLTSTPGEGQKDVPTTESTKLQNLHSRKLWDIGPGSIHGEGKTPKLAVKRLW PGCGDDEPNAKKALAFEQFVSIYDRKITPLPQIEKSQSRKQNNEFDFAFEMSAKPSAN SEDILLAGLLQDWKLEDHDNAQIGCDPAPMPASQSELALVHLKLPCKTPQSQPQVEAH QNASVATVNSDSGSIILVSDDSSATACSFLHSSELCNSSDFEELRKEFTEDSSYIDLS LDSGSSNPSAIETDMKTHKLGAKRRSPQTKGDVLAKKISYQNLNEMNISSNQPVVTRS GRVVVSRPNQQFDYSSSSQSKGDGEEDSDEVSLDADDDEYEGEDFDQLKWTERKRRSF RNTSLAFSPDGSRSSPEATPPMVYVELGGKIVIIRDKPQPNIVLEDDKELKTQMHKFL GLIPSRRKLFDPSEYNMDRGDIEMDVYVPTSLVTNPSPRSSPSPVTPSARSRIWQETT PTSICSNLNLSHTYTPTVNELQTKHMDDSIIQVNLDCFQKKTPDSVKEPIDLSELPSQ KQLATNCRRHKSCVARLERHPHFYGFVQSLRPSVSLNMCHPLALTFRRTNFQQSKVAL AKVLFNMFNHAVFHCGLQVPIVWKHAMKKRWKCELGFDASGRRTAQILLLHSIDTAAE LIYLLLHEMCHVAAFLFNRELGHGDNCRRWTYQAKMAFPEVPALMECIASFMYTCSMC SRSSYGLADLKSYNIRCYYCQFEVSVKPVSKANMHEGARSDRTMTPFKCFIRDKYLKL GAEGGVTHSSKMALLNEMFAKMTAATE" misc_feature 1921..2352 /gene="CG2694" /locus_tag="Dmel_CG2694" /gene_synonym="Dmel\CG2694; EG:100G10.8; EG:95B7.10" /note="SprT homologues; Region: SprT; smart00731" /db_xref="CDD:214794" ORIGIN 1 ttattaccgc cacataggta acgcggcaac agacgcgaaa ttgccagtac gatggcattc 61 gagagctctg cacagcagtt aaagattccg gacgaaagga tgaatgcaca gttgaacaat 121 agtggcgtac aggcgtcgca atcccatgtc ctattcacac ccaatcagat accgggcgcg 181 ctgataagga tttcagacga tttccttacc tccacgccgg gagagggcca gaaggacgtg 241 cccaccacgg agagcacaaa attgcagaac ctgcacagcc gcaagctgtg ggacataggt 301 cctggttcca ttcatggcga ggggaagaca ccgaagttgg ccgtgaagcg tctctggcca 361 ggctgcgggg acgacgagcc gaacgccaaa aaagcactgg cattcgagca atttgtgtcg 421 atatacgata ggaaaataac gccgctacct caaatcgaaa aaagtcaaag ccgcaaacaa 481 aataacgaat tcgatttcgc attcgaaatg tccgcgaagc caagtgccaa ttcggaggac 541 atccttctgg ccggcctgct ccaggactgg aaactagagg accatgacaa cgcacagatt 601 ggctgcgacc cagcgcccat gccggccagt caatccgaat tggcactggt tcatttgaag 661 ttgccgtgca agacgcccca atcccagccc caggtggaag cccatcaaaa tgcttcagtt 721 gcgaccgtca acagcgacag cggaagcata atactagtgt ccgatgattc ctcagctacg 781 gcgtgcagct tccttcactc gtccgagctc tgtaactcct ccgacttcga agaactgcgc 841 aaggagttca ccgaggactc ctcatacatc gatctctcac ttgattcggg cagcagcaat 901 cctagtgcca ttgaaaccga catgaagaca cacaaactgg gcgcgaagcg cagatcgccg 961 cagaccaagg gcgatgtgtt ggccaaaaag atttcttacc agaatctgaa cgagatgaac 1021 atctcctcga atcaacccgt ggtgacgcgc agtggtcgtg ttgtggtctc acgtccgaac 1081 cagcagtttg actactcctc ctcctcccag tcgaagggcg atggcgagga ggactccgac 1141 gaggtgtcac tggatgccga cgacgatgag tatgagggag aagatttcga tcagctcaag 1201 tggacggagc gcaaacggcg tagctttaga aacaccagct tagccttcag ccccgatggc 1261 agccgctcgt cgccggaggc aacacctccg atggtctatg tcgaattggg cggcaaaatc 1321 gtgatcatta gggataaacc acagcccaat atcgttctgg aagacgataa ggaactcaag 1381 acgcagatgc acaagttttt gggtctgatt ccatcacgtc gcaagctctt cgatccgtcg 1441 gaatacaata tggatcgggg ggatattgag atggatgtgt acgtaccgac cagtcttgtt 1501 accaatccat cacctaggtc ctcaccaagc ccagttactc catcggccag gtcacgaata 1561 tggcaggaaa caacgccgac atccatttgc tccaacttga atttatcgca tacctacaca 1621 ccgaccgtga atgagctcca gactaagcac atggatgact ctataatcca ggtgaatttg 1681 gactgctttc agaagaaaac accagactct gtcaaggagc ccattgatct aagcgagctt 1741 cccagccaaa agcaactagc caccaactgc cgccgccaca agagctgtgt agcccgcctg 1801 gagcggcacc cacatttcta cggtttcgtc cagtcgctca gaccgtcagt ctcgctcaac 1861 atgtgccatc cgctggccct caccttccgg cggaccaatt tccagcaatc taaggtggca 1921 ctggccaagg ttctgttcaa catgttcaat cacgcggtct tccactgtgg cctgcaggtg 1981 cccattgttt ggaagcacgc aatgaagaag cgctggaaat gcgagcttgg cttcgacgcc 2041 tccggcaggc gcacagcaca gatcctgctt ctgcacagca tagacactgc ggccgagctt 2101 atctatctcc tgctgcacga gatgtgccat gtggcggctt tcctgttcaa ccgggagttg 2161 ggtcacggcg acaactgccg cagatggacc taccaggcga agatggcctt tccggaggtg 2221 cccgccctca tggagtgcat agctagcttc atgtatacgt gcagcatgtg cagccgttcc 2281 tcctacggct tggccgactt gaaatcgtac aacatacgct gctactactg ccagttcgag 2341 gtgagcgtga agcccgttag caaggcgaac atgcacgagg gcgcccgttc cgatcggacg 2401 atgacaccgt tcaagtgttt catccgtgac aagtatttga agctgggcgc ggaggggggc 2461 gtcacacact cctcgaagat ggcgctactc aacgaaatgt tcgcgaagat gacagccgcc 2521 acggaatagc tggcagctgt ctagcggcta gcacacaact tgaagaatat attttataag 2581 tactatatga acaaccatgg aaggcggccc catcaaaatg gagcagcctc cagtgaaaac 2641 gaacacgctg tgacctactt tatataccta cctacatttt atacaaactt ctataacctg 2701 tacaatggcg ctatatggga tggggggctc cacggagccc cagaatcccg agaaggcgtt 2761 cgtcagctag tctacgtgtt aactagtata tacttttatg tttaactaac aaattacatg 2821 tgaatactac tacagtaagt ctcgtcggaa cgctggtggc tattgaaata gcatgtcgct 2881 gttttttttc tacggaatca aatgagaaat caaaacaatt taatatgaga aaccatcata 2941 gtcgcatgtt tgaagaaatg gaaggcattg tttgtttgtt tttgtgagaa ttttctgttt 3001 gccaacttct tgttaatggc accccaaaaa tgaaaacgac aattatacaa atgcaaatac 3061 agatacacca atttt