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LOCUS NM_166927 2860 bp mRNA linear INV 26-DEC-2023 (Unc-76), mRNA. ACCESSION NM_166927 VERSION NM_166927.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2860) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2860) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2860) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2860) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2860) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2860) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2860) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2860) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2860) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2860) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2860) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2860) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2860) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2860) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2860) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2860) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2860) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2860) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2860) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2860) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2860) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2860) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2860) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_166927.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2860 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2860 /gene="Unc-76" /locus_tag="Dmel_CG3981" /gene_synonym="BcDNA:GH10260; CG18851; CG3981; Dmel\CG3981; Dunc-76; EG:67A9.1; l(1)G0066; l(1)G0158; l(1)G0310; l(1)G0333; l(1)G0360; unc-76; UNC-76; unc76" /note="Uncoordinated 76" /map="2C10-2D1" /db_xref="FLYBASE:FBgn0040395" /db_xref="GeneID:31179" CDS 387..1811 /gene="Unc-76" /locus_tag="Dmel_CG3981" /gene_synonym="BcDNA:GH10260; CG18851; CG3981; Dmel\CG3981; Dunc-76; EG:67A9.1; l(1)G0066; l(1)G0158; l(1)G0310; l(1)G0333; l(1)G0360; unc-76; UNC-76; unc76" /note="CG3981 gene product from transcript CG3981-RA; CG3981-PA; Unc-76-PA" /codon_start=1 /product="uncoordinated 76, isoform A" /protein_id="NP_726792.1" /db_xref="FLYBASE:FBpp0070361" /db_xref="GeneID:31179" /db_xref="FLYBASE:FBgn0040395" /translation="MRDLGTKMAELKFEAPLAKFEETDEWGGCDFISSQNAINDTLNL NLKDSSAGGKPDATKLRLLEDAVRDAHVSKNGGGVVGGGAGSISPNCNTLQGGSLIEI GLSDVGLVPGEGAGVGLDGLEKRSLAVGDHVDNFTETFGGSLEDLVNTFDEKITKCFG NYEENVEELAPVQVRSQEEIMNECQMWWTITGNFGNILPIDWSKSYTRQMHMPTLNLG QNHTKQQQQNRNQQQQLHNQSHQAYPHTNGLGSGSGSGLDAQTPGDEFNDLTSEDEAV ANDLDMHALILNGLNGDMDDQPIKTVEEVIKEIDDIMDEAESPLDEPETCDSEVIEKA REVLGAPLYAEKLQYLTTTQLNELYMEMEVLIQELSETLINELALRDELEFEKELKNS FISLLLAVQNKRRQYHVEKKRGKFQGPEPKYLTTVIPYHLENGTPNNQSLQVLIKILK AINEDSPTVPALLTDYILKVLCPT" misc_feature 813..1640 /gene="Unc-76" /locus_tag="Dmel_CG3981" /gene_synonym="BcDNA:GH10260; CG18851; CG3981; Dmel\CG3981; Dunc-76; EG:67A9.1; l(1)G0066; l(1)G0158; l(1)G0310; l(1)G0333; l(1)G0360; unc-76; UNC-76; unc76" /note="FEZ-like protein; Region: FEZ; pfam07763" /db_xref="CDD:462257" ORIGIN 1 ctctcagtcg aaattagttg tgaagtgtgc tcgtgagcag atcagtggat caaacaaaca 61 gccagaaaat cgagcgctgg gcaagcggaa taaatccaat tggaattgtc cgaaccgcag 121 ttttacggag tcgagtgttc cgtgtttcgt attccggggc attttccccg ccgaaagccc 181 cgctcaaccc cccaagcaaa cagccgaatt aggggttgca aagtttttgc agccagcccg 241 gaaaagtcag aggaacttgt tttctaaggg aagaaaaggg aagcacgcaa gcgacgactg 301 cccccaaaga ccaaacggaa tcggagtctg aatcggaatc ggaaggggac tccgccgaat 361 ccttgagaga atcttttgcg cgtgccatgc gtgacctcgg caccaaaatg gccgagctaa 421 aattcgaggc tccattggca aagttcgagg aaacggacga gtggggcggc tgcgacttca 481 tctcgagtca gaatgccata aacgacacgc tcaacctgaa tctgaaggac tcctccgccg 541 gcggcaagcc ggatgccacc aagctgcggc tcctagagga tgctgtacgc gatgcgcacg 601 tgagcaagaa cggaggagga gtagtgggag gaggagctgg ctccattagc cccaattgca 661 acacgctcca gggtgggtcg cttattgaaa tcggcctgtc cgatgtggga ttggtgccgg 721 gcgagggagc cggcgttggt ctggacggtc tggagaagcg ctccctggcc gtcggcgacc 781 atgtggacaa cttcacggag accttcggcg gaagtctgga ggatctggtc aatacgttcg 841 acgaaaagat aaccaagtgt ttcggcaact acgaagagaa cgtcgaggag ctggctccgg 901 tgcaggtgcg cagccaggag gagatcatga acgaatgcca aatgtggtgg accatcacag 961 gaaactttgg caacattctg cccatcgact ggtccaagtc gtacacccgt cagatgcaca 1021 tgcccacact gaatctgggc cagaaccaca cgaagcagca gcagcagaat cgcaaccagc 1081 agcagcagtt gcacaaccag agccatcagg cgtatccaca caccaacggt ttgggatccg 1141 gatccggatc cggcctggat gcccagactc cgggcgatga gttcaacgat ctgaccagtg 1201 aggacgaggc ggtggccaac gatttggaca tgcacgccct catccttaac ggcttgaacg 1261 gtgacatgga cgaccagccg attaagacgg tagaggaggt gatcaaggag atcgacgaca 1321 tcatggacga ggccgagagc ccgctggacg agccggagac ctgcgattcg gaggtgatcg 1381 agaaggcgcg agaggtgctg ggcgcccccc tctatgcgga aaaactgcaa tatctgacca 1441 cgacacagct gaacgagctg tacatggaga tggaggtgct gatccaggag ctgagcgaga 1501 cgttgatcaa cgagctggcc ctgcgcgacg agctggagtt cgagaaggag ctgaagaact 1561 cgttcatctc tctgctcctc gccgttcaga acaaaaggcg gcagtaccat gtggagaaga 1621 agcgcggcaa gttccagggt cccgagccca agtacttgac cacagtcatt ccgtatcacc 1681 tggagaacgg cacgcccaac aatcagtctc tgcaggtcct gatcaagatt ctcaaggcca 1741 tcaacgagga cagcccgacg gttccggccc tccttacgga ctacatcctg aaggtgctct 1801 gccctacata agcgccgcaa gcggtagtcg ccgaggagca ggaaccccag ctgtcgctcc 1861 atctctctgt ctgtgtttat acaattatac aacttgcata tacacaccga acacaccaca 1921 cataatttaa tgattagttc gtactttaaa ttattgttta aatgcaatcc gtgtactctc 1981 cgcggagaag aagatttgcc gcataaagag aggactctag tgattcgtct gtcgaatatg 2041 aggcacccaa agtggggtct tcttctcaac ggagtgcttt tcccggccga ttcgaccgac 2101 agaacaaaat atgcaacaaa acatacatgc aatacacata catatataga cacatatata 2161 tatatataaa ccgaaaaatt taccgagagc gcgctctacg aactcagcca gtcctcccat 2221 ggcaataata ctcaattctc tccgccgcct ctctttctct ttaaggagca ttcgtattgt 2281 taaagagccg actccaacta agcttaaaat acatacatac atatatggta aatgcatgtg 2341 ggccagttgc aagtccgcct gccggtgcag cttcaatttt ttcgtctata tgtgaaatat 2401 gcagatctaa atcgatacac gcttgcatta tgttcgccca gctatctgcg atcgaacgga 2461 cagccaatca ctaggtttta caataaggat cttatcttgt atgtaatata taatctgatt 2521 ataagaggtg tgtggcctgc agtccctgga aaatccgccg tttcgaaatg tgttccgagt 2581 gcaatttaca aaaatatgat ttgagatggc atcagaatca gactcagaat cggaaaatca 2641 gaattagttg cagcaattgt tttcgcatcg ctttaagttt acgacgccta atttactcat 2701 ttttttattg tttacgaggc cataaaacgc gttctatttt gttcaaaaca attgtttaat 2761 gtaaatggag gaaacacaaa tttaatttta atttgcatag aaaacgctgt gttatttact 2821 tttaccaaac aagcataaat aaaacgctaa tgataatgct