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LOCUS NM_166899 2636 bp mRNA linear INV 26-DEC-2023 B (CG32809), mRNA. ACCESSION NM_166899 VERSION NM_166899.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2636) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2636) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2636) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2636) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2636) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2636) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2636) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2636) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2636) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2636) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2636) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2636) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2636) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2636) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2636) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2636) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2636) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2636) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2636) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2636) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2636) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2636) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2636) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Dec 17, 2009 this sequence version replaced NM_166899.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2636 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2636 /gene="CG32809" /locus_tag="Dmel_CG32809" /gene_synonym="CG3737; CG3783; CG3791; Dmel\CG32809; EG:171E4.3; EG:73D1.1; EG:9D2.2" /map="2B6-2B7" /db_xref="FLYBASE:FBgn0023531" /db_xref="GeneID:31121" CDS 218..2602 /gene="CG32809" /locus_tag="Dmel_CG32809" /gene_synonym="CG3737; CG3783; CG3791; Dmel\CG32809; EG:171E4.3; EG:73D1.1; EG:9D2.2" /note="CG32809 gene product from transcript CG32809-RB; CG32809-PB" /codon_start=1 /product="uncharacterized protein, isoform B" /protein_id="NP_726755.1" /db_xref="FLYBASE:FBpp0088755" /db_xref="GeneID:31121" /db_xref="FLYBASE:FBgn0023531" /translation="MLIRWKSKDKSASSNQSVGGSSSSSSKKKRKGREGEEDWQNEAK SGRLPSNEQGGDERRRAMRRDDPRRHTLGGDMLVYGSQHPHAHQMAPQQQRAMDLEMS TRAQKNKKNQPMRGYAPVNQGPLFDDDPGIMSEVETASTGFRRGGKQRSSLPVVRTPS KTLERPLGLVFLQYRSETKRALLPNEITSIDTVRALFVRSFPRQLTMSYLEGPNVKIY IHDASKDMFYELEDVRSHLREIRDRSVLRLFESTEVAAPPQILPGGPGIPQPLPQAQA NWDQDQSYFSEPEFDSDYKHQHIHKSKIGKQPAPYYVGSSQTLPRGMYSSERNKVSMD GYTSSPERSSRGNYEEPYYSQYGTRGAVVAPIIDEEQSDGTMTEDQYALYGIKVGPGP NRLTHRGNQIYDPTRPEDLHRIRVEHMERQLANLTGLVQKALVNQNPQIAPLAVPTLD PNYLVVPSQMQANGSGDELYIREKAPKLGKNSCQKSVSFEKSVSFSDDIQGIPKSHNP LHAAETKPTKPAIKSSTLPRTSSQERDRLKPPPPPKPIVLAQTAHPNYRADIALAPEV YNHLRGLQKKAKDLRMEVRTLRRLSQAQAVAVREDIKGTFMRIRATLLASSGSFWDHQ GDQDATRISREEELYKQEVIRLEKDLSDLEGSVENLRGEVINRRTRVNMTAVEDMALV LSRASKTVAELKLKFPSLSNGLRCILSNEMEKVVREEKFLKEEPDRLESALRRCKKLT GTLVTLKRLASVQEQRLPPNEPTISEETPRSADISAPDKFNWRWSSNFKEAITE" misc_feature 728..>961 /gene="CG32809" /locus_tag="Dmel_CG32809" /gene_synonym="CG3737; CG3783; CG3791; Dmel\CG32809; EG:171E4.3; EG:73D1.1; EG:9D2.2" /note="Actin interacting protein 3; Region: AIP3; pfam03915" /db_xref="CDD:427585" ORIGIN 1 ctgcgtcggt ggacgagtgc cgtgtcctga ctccagaaag ctgtgtagtg acgagtgcaa 61 agcgaagcga attgaatcga atctttatcc taaggacacg gctaaatcgg tgagctcctc 121 gagctatgag cacctagacc cgttaattgt gaaaccttcc tgaatcggca agctgcaaca 181 tagccactga gctccgcaca tctcaaacgg ctgcaggatg ttgatccgtt ggaagagtaa 241 ggacaagagc gcctcctcca accagagcgt cggcggcagc agcagctcct cgtcgaagaa 301 gaagcgcaag ggtagagagg gcgaagaaga ctggcagaat gaggcaaagt cgggacggct 361 tccgtcgaat gaacagggtg gcgacgaaag acgacgagcc atgcgacgcg acgatccacg 421 acgacatacg ctcggcggcg atatgctggt ctacggctcg cagcatccac acgcccatca 481 gatggcgccc cagcaacagc gggccatgga tctggagatg agtacgcgcg cgcagaagaa 541 caaaaagaac cagccgatgc gcggttatgc gcctgttaac cagggaccgc tgttcgacga 601 cgatcccggc atcatgtcgg aggtggaaac ggccagcacc ggattccgga ggggcggcaa 661 gcagcgctcc tcgctccccg tggtacgcac gccctcgaaa actctggaac gaccgctggg 721 cctggtcttt ctgcagtacc gctcggagac gaagcgcgcc ctgctgccca acgagatcac 781 ttcgattgat acggtgcgcg ccctgttcgt acgctcgttt ccgcgccagt tgaccatgtc 841 atatctggag gggcccaatg tgaagattta cattcacgat gccagcaagg atatgttcta 901 cgagctggag gacgtgcgct cgcatctgcg cgagatcagg gatcgctccg tgctgcgtct 961 ctttgagtcc actgaggtgg cagccccgcc ccagattctg cccggcggcc ctggaatacc 1021 ccaacccctg ccgcaggcgc aggccaattg ggatcaggat cagagctact tcagcgagcc 1081 ggagttcgac tcggactaca agcaccagca tatccacaaa tcaaagattg gcaaacaacc 1141 ggcgccctac tacgtgggct catcgcagac actgccgcga ggcatgtact cttcagaacg 1201 gaacaaggtg tcgatggatg gatataccag ttccccggag cgcagtagcc gcggaaacta 1261 cgaggagcca tactacagcc agtacggaac gaggggcgcc gtggtggcgc ccattatcga 1321 cgaggagcag agcgatggaa ccatgacaga ggatcagtac gcactgtacg gcataaaggt 1381 gggaccagga cccaaccgcc tcacgcatcg cggcaaccag atctacgatc ccactaggcc 1441 cgaagacttg catcggattc gtgtggagca catggaaagg cagctggcca acctgacggg 1501 actagtgcag aaggccctcg ttaaccagaa cccccagatt gccccgctgg ccgtgcccac 1561 tctggaccca aactatctgg tcgtgccgtc gcagatgcaa gccaacggct ccggggatga 1621 gctgtacatt cgggagaaag ctcccaagct gggcaaaaac tcgtgccaaa aatccgtgtc 1681 ctttgagaag tccgtgtcat ttagcgatga catacaggga ataccaaagt ctcacaatcc 1741 cctacatgcc gccgaaacga agccaaccaa gccggcaatc aagtcgtcca ctcttccacg 1801 cacctcgtcc caagagcgtg accgactaaa gcctcctccg ccccccaagc cgatcgtgct 1861 agcccagacc gctcatccca actaccgggc ggacattgcc ctggctcctg aggtgtacaa 1921 ccatttgcgc ggcctgcaga agaaggccaa ggacctgcgc atggaggtgc gcaccctgag 1981 gcgcctctcg caggcccagg ctgttgccgt gcgcgaagac atcaagggaa ccttcatgcg 2041 gattcgcgct actctgctgg cgagcagcgg cagcttctgg gatcaccagg gcgaccagga 2101 cgccacacgc atttcgcggg aggaggagct ctacaagcaa gaagtaatcc gcctggagaa 2161 ggacctcagc gacctggagg ggtctgttga gaacctgcgc ggcgaggtca ttaaccggcg 2221 aacacgcgtc aacatgacgg ccgtggaaga catggctctg gtgctgagcc gggcaagcaa 2281 aaccgtcgcc gagctgaagc taaagttccc atccctgtcg aatggcttgc gctgcatcct 2341 gtctaacgag atggagaaag tggtgcgaga agaaaagttc ctcaaagaag agcccgaccg 2401 tttggagtcg gcgctacgtc gctgcaagaa gctgaccggc acactggtga cgctcaaacg 2461 cttggccagc gtgcaggagc aacggctgcc gccgaacgag ccgactatta gtgaggagac 2521 accacgatcc gcggacatct cggcgcccga caagtttaac tggcgatgga gttcaaactt 2581 caaagaggca attactgagt aatgactgaa aattcaaata taaaagaaca tttacg