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LOCUS NM_166885 3697 bp mRNA linear INV 26-DEC-2023 D (CG32813), mRNA. ACCESSION NM_166885 VERSION NM_166885.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3697) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3697) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3697) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3697) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3697) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3697) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3697) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3697) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3697) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3697) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3697) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3697) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3697) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3697) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3697) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3697) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3697) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3697) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3697) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3697) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3697) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3697) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3697) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_166885.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3697 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3697 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /map="2A1-2A1" /db_xref="FLYBASE:FBgn0052813" /db_xref="GeneID:31089" CDS 701..2419 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="CG32813 gene product from transcript CG32813-RD; CG32813-PD" /codon_start=1 /product="uncharacterized protein, isoform D" /protein_id="NP_726737.1" /db_xref="FLYBASE:FBpp0070210" /db_xref="GeneID:31089" /db_xref="FLYBASE:FBgn0052813" /translation="MEKTPRYTQRERNMVLSYAAQYKDVIENKRTDAESNRKKDEVWL QIAKEFNSRVYHQRSAKQLRQLYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVA QYIAEQLSPEGAGGGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKS ETISDNEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSSGAA GGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAPKPDITIQTVGH IRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLPLTAEQVQQHTLLNGLGLSA VNPAQSLQAAINAAYGSAAPSSSVAISSRRTPPTLQLPRLQRGNINNSHHTAGSTSNS AVASNGVQLLLNGGHHAQMTHNHLARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNS SGSGAGSGGSSANNSGVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKID LINAQIEYWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVLQ TQASTS" misc_feature 707..937 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="Myb/SANT-like DNA-binding domain; Region: Myb_DNA-bind_5; pfam13873" /db_xref="CDD:433544" ORIGIN 1 gacatttgac gtcgcgcgtt cgcttcgccc gtttcagcag cgttgccgcc gaaagcagag 61 tgttgttgtt gccgttgccg ttgcgtcgtg ttgcgttgcg ttgttgtttg ccgtgccgat 121 tttattgtta tttgaaatcg gtcgcggagc gtgcggtgcg gagcagtgct cctttttttt 181 tctacttttt gtttagttcc gggtcagggg gcgtccaagg tttaaagcaa caactgtgag 241 cagtgaaaaa aaaaataaca gaacgagcgt tcagctataa acgatatcaa acccaatagg 301 aagaaacgca cacaaagagc cgaaaacaaa gtcttcgcca gagagcgctg agtgggacgg 361 agaagggaag aggcaatagc gagcgggaca gcgagcggct ggcggtcagc gacgttggac 421 aagtagttga aaatattgcg catacgccgc gtgaaccaga ggcacagagt agagcagcaa 481 gccgcgcgtt cttcgttctg catcgcacaa atacagcttt gagaaagcca gcagaggagt 541 ggggtgcaag gaaacacatt acgcatcgag gaggagaagg aggagaagga gaagaaggag 601 gagacgagga gggccgagga ttagcggctg cgaaggaagt ccatttcaaa gtgcagccgg 661 ccacaaatcc agcttcacga cgtcttgcaa acggttgaaa atggagaaga ctccccggta 721 cacgcagcgg gagcggaaca tggtgttgag ctacgcggcg cagtacaagg atgtgatcga 781 gaacaagcgc acggacgcgg agtccaaccg caagaaggac gaggtgtggc tgcagatcgc 841 caaggagttc aactcgcggg tctaccacca gcgcagcgcc aagcagctgc gccagcttta 901 caagaacatg aagctgctgc tcaaaaagga cctatgcggc gaggacaaga gcaaccattc 961 gttcatggac ctgctcaaca cgctgtcgca ccaggagtcc gtggcccagt acattgccga 1021 gcagctgtcg ccggagggcg cgggcggtgg cggcggcggc ggtaagcaag gcggcgcggg 1081 caacggaggc ggaaacggac accaatcgga cgactacgac gactccaaga tgccccacta 1141 ccacgagggc atggacacgg acgtgatcct tatcaagtcg gagacaatta gcgacaacga 1201 gcagacggac aatggcatgg actgcctgga cgaggacgat gacgacgact gcttgagcca 1261 caaggcgccg gaggtgtgcc tcgaggagga ggacgacgtg ctctttccaa cggacgtgcg 1321 ccagctgcag caggtgggat cgtccggagc cgccggcggt ggtgtctccg gaggctccct 1381 tcccggaaac atgtctagca acgggattac cgaaaccagt cgccgcgccg caagctcgcc 1441 cgtgtgctcc acgaagacct cgattagttc cagcgggagc tacgcatcag cgcccaaacc 1501 ggacatcact atccagaccg tgggccacat acgcgtgggc agctttgcca acatcaacaa 1561 gacgctgcag aacggcggct ccggcacagg agctgtccta tcagcggcca gcaatggcgg 1621 ctccagtgcc agtggagtgc tgccgctcac agcggagcaa gtgcagcagc acacgctgct 1681 gaacggccta ggattgtccg ccgtgaatcc ggctcagtct ctgcaggcgg ccatcaatgc 1741 cgcctatggg tccgccgctc catcttcatc ggtcgccatt agcagccgcc gcacccctcc 1801 cactctgcag ttgccacgcc ttcagcgcgg aaacatcaac aatagccacc acactgccgg 1861 cagcacaagc aattccgcgg tggcctccaa tggagtgcaa ctgttgctca acggcggcca 1921 ccacgcacag atgacgcaca accatttggc gcgggacaag acaggaggcg tggccatcgg 1981 ggcggcgggc agtttcaacg ggtacaacgg actggcagtg gcgggcacag tgtgcagcgc 2041 cttgaacagc agcggatccg gagccggaag cggcgggagc agtgccaaca acagcggcgt 2101 gggcctgggg atcggcgggg cacacacgtc gggcagcgga ggaagtggca gcggtgggac 2161 gaggagccag caccaggagc tgatgaattc gctgaggatc gaggagagca agcggaaaat 2221 cgacctgatc aacgcccaaa tcgaatactg gcagacgctc acccgcaagc tgaacagtca 2281 ggcgaatcac atgcccaatc ctgcgtgccc gtgccacttc cctggagcca gtgtgctctc 2341 gcccgtcgcc gtgaccgccg ctagtgcctc atcgtccgct tccgccaatg tgttgcagac 2401 gcaggccagc accagctagt ccgcagccaa ggggcggttc gaactagtcg ggggtcctgc 2461 gggcgaaagc gaaagcgaca gcgacatcat ctcgatagtg gacatagatg atgggcggtc 2521 tagggaggac gagcagtcgg aggacgatgg cgagaaccgt gaccaggcca taacggacct 2581 gacgctaccc gacgaagacg aggaagacga tgtagacgaa gatgactcac aggatgcctt 2641 ggtcagggat gttggcgtgg tgggcggcct gtcgtcgcca gatacaccgc cccactcctc 2701 tccgccgcca gcgaagcgct cgaagcgcca ggaagtcacc tccgagctcc tgaggcagct 2761 ggccctgcag cagaatcagg atccccagga ggggtgctag tattttgtct agtttgctaa 2821 ttttatactt gctaccatgg attgacgcaa ccactttgta acattaattt taccatatat 2881 atttatttac gcccagtttg agtgccaaaa cagaaaccaa gattggggcc ttgccatcga 2941 aaatgcttgc caaaggacct gctgaaataa ccggtcataa ccactcgcga cccactattt 3001 atttgccagc ctaactgaaa catagcgatt catctcattt taaaatgtct tgcgtcgcct 3061 atttttttat tgcctttttt tttctataca tgtaacgtgt ttatttttaa gttttcctac 3121 gagctgctac caaaaagaat aagaagaaga aggtgactat cttgaatgta catttacttt 3181 acaaaactag accttactta cttacttaat tagagatcga gcagctaaga acgcatgaaa 3241 atgaaatgta caaatgtggt tcctaatcta gtccctaaag tcaaaagtga agaacgaaag 3301 agctacagaa aagaaatcga aattgttacg cctagccgag aacttgtgta ttattttttt 3361 atatcgctta gattgttccc ccgaggaaag cattgaagga actgtagcta atttatgtac 3421 ttaatgaacc agtgaaacca aaccaatgat ttgaaatggt gtaaagagaa gaaacttgct 3481 agtcgccgct gcataactgt gtaaatgtgg cacacaaacc atttagttag tgttagtgct 3541 actgtacgtg taaaatacaa ttaattgcct atccagaccc agtaaccaca atttacaagg 3601 aagcacacac caaacgaaac tgaaaaccaa gaaaacaaaa ctatttatac aattttgtaa 3661 acaagaactt attaataaaa caatgaattt actttgt