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LOCUS NM_166884 3438 bp mRNA linear INV 26-DEC-2023 B (CG32813), mRNA. ACCESSION NM_166884 VERSION NM_166884.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3438) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3438) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3438) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3438) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3438) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3438) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3438) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3438) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3438) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3438) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3438) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3438) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3438) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3438) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3438) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3438) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3438) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3438) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3438) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3438) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3438) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3438) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3438) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_166884.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3438 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3438 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /map="2A1-2A1" /db_xref="FLYBASE:FBgn0052813" /db_xref="GeneID:31089" CDS 442..2160 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="CG32813 gene product from transcript CG32813-RB; CG32813-PB" /codon_start=1 /product="uncharacterized protein, isoform B" /protein_id="NP_726736.1" /db_xref="FLYBASE:FBpp0070213" /db_xref="GeneID:31089" /db_xref="FLYBASE:FBgn0052813" /translation="MEKTPRYTQRERNMVLSYAAQYKDVIENKRTDAESNRKKDEVWL QIAKEFNSRVYHQRSAKQLRQLYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVA QYIAEQLSPEGAGGGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKS ETISDNEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSSGAA GGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAPKPDITIQTVGH IRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLPLTAEQVQQHTLLNGLGLSA VNPAQSLQAAINAAYGSAAPSSSVAISSRRTPPTLQLPRLQRGNINNSHHTAGSTSNS AVASNGVQLLLNGGHHAQMTHNHLARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNS SGSGAGSGGSSANNSGVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKID LINAQIEYWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVLQ TQASTS" misc_feature 448..678 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="Myb/SANT-like DNA-binding domain; Region: Myb_DNA-bind_5; pfam13873" /db_xref="CDD:433544" ORIGIN 1 gcactccaac ggtacttctg agcgtgcccg aattcgaatt ggaattcagt cgagctttgc 61 gcgtcgtcgc cgccgttcgc gaagtttgtt gctggatggg ctcgttcgct atcccccacc 121 cccacttatg tcgtgtcgtg tcgttgtctc tctctctctc tcgtactcgc tcaaagcctg 181 tcacccactt ttctgcgccc gctcgccggc tttggcgcgg ccttaaaaca tatcccactg 241 tgtcgtcgca ctctgcccgc tcccctctca gctcgagcct gtccggcccc aaagagccgc 301 ttcggctgcc gaggagagcg tctagaagga tcgcacctgc agcgcaatcg atgccacgat 361 ggccactttc tcaaggagtt cgtccacgca ctacgcgtgc accgtaagaa aaacttcacg 421 acgtcttgca aacggttgaa aatggagaag actccccggt acacgcagcg ggagcggaac 481 atggtgttga gctacgcggc gcagtacaag gatgtgatcg agaacaagcg cacggacgcg 541 gagtccaacc gcaagaagga cgaggtgtgg ctgcagatcg ccaaggagtt caactcgcgg 601 gtctaccacc agcgcagcgc caagcagctg cgccagcttt acaagaacat gaagctgctg 661 ctcaaaaagg acctatgcgg cgaggacaag agcaaccatt cgttcatgga cctgctcaac 721 acgctgtcgc accaggagtc cgtggcccag tacattgccg agcagctgtc gccggagggc 781 gcgggcggtg gcggcggcgg cggtaagcaa ggcggcgcgg gcaacggagg cggaaacgga 841 caccaatcgg acgactacga cgactccaag atgccccact accacgaggg catggacacg 901 gacgtgatcc ttatcaagtc ggagacaatt agcgacaacg agcagacgga caatggcatg 961 gactgcctgg acgaggacga tgacgacgac tgcttgagcc acaaggcgcc ggaggtgtgc 1021 ctcgaggagg aggacgacgt gctctttcca acggacgtgc gccagctgca gcaggtggga 1081 tcgtccggag ccgccggcgg tggtgtctcc ggaggctccc ttcccggaaa catgtctagc 1141 aacgggatta ccgaaaccag tcgccgcgcc gcaagctcgc ccgtgtgctc cacgaagacc 1201 tcgattagtt ccagcgggag ctacgcatca gcgcccaaac cggacatcac tatccagacc 1261 gtgggccaca tacgcgtggg cagctttgcc aacatcaaca agacgctgca gaacggcggc 1321 tccggcacag gagctgtcct atcagcggcc agcaatggcg gctccagtgc cagtggagtg 1381 ctgccgctca cagcggagca agtgcagcag cacacgctgc tgaacggcct aggattgtcc 1441 gccgtgaatc cggctcagtc tctgcaggcg gccatcaatg ccgcctatgg gtccgccgct 1501 ccatcttcat cggtcgccat tagcagccgc cgcacccctc ccactctgca gttgccacgc 1561 cttcagcgcg gaaacatcaa caatagccac cacactgccg gcagcacaag caattccgcg 1621 gtggcctcca atggagtgca actgttgctc aacggcggcc accacgcaca gatgacgcac 1681 aaccatttgg cgcgggacaa gacaggaggc gtggccatcg gggcggcggg cagtttcaac 1741 gggtacaacg gactggcagt ggcgggcaca gtgtgcagcg ccttgaacag cagcggatcc 1801 ggagccggaa gcggcgggag cagtgccaac aacagcggcg tgggcctggg gatcggcggg 1861 gcacacacgt cgggcagcgg aggaagtggc agcggtggga cgaggagcca gcaccaggag 1921 ctgatgaatt cgctgaggat cgaggagagc aagcggaaaa tcgacctgat caacgcccaa 1981 atcgaatact ggcagacgct cacccgcaag ctgaacagtc aggcgaatca catgcccaat 2041 cctgcgtgcc cgtgccactt ccctggagcc agtgtgctct cgcccgtcgc cgtgaccgcc 2101 gctagtgcct catcgtccgc ttccgccaat gtgttgcaga cgcaggccag caccagctag 2161 tccgcagcca aggggcggtt cgaactagtc gggggtcctg cgggcgaaag cgaaagcgac 2221 agcgacatca tctcgatagt ggacatagat gatgggcggt ctagggagga cgagcagtcg 2281 gaggacgatg gcgagaaccg tgaccaggcc ataacggacc tgacgctacc cgacgaagac 2341 gaggaagacg atgtagacga agatgactca caggatgcct tggtcaggga tgttggcgtg 2401 gtgggcggcc tgtcgtcgcc agatacaccg ccccactcct ctccgccgcc agcgaagcgc 2461 tcgaagcgcc aggaagtcac ctccgagctc ctgaggcagc tggccctgca gcagaatcag 2521 gatccccagg aggggtgcta gtattttgtc tagtttgcta attttatact tgctaccatg 2581 gattgacgca accactttgt aacattaatt ttaccatata tatttattta cgcccagttt 2641 gagtgccaaa acagaaacca agattggggc cttgccatcg aaaatgcttg ccaaaggacc 2701 tgctgaaata accggtcata accactcgcg acccactatt tatttgccag cctaactgaa 2761 acatagcgat tcatctcatt ttaaaatgtc ttgcgtcgcc tattttttta ttgccttttt 2821 ttttctatac atgtaacgtg tttattttta agttttccta cgagctgcta ccaaaaagaa 2881 taagaagaag aaggtgacta tcttgaatgt acatttactt tacaaaacta gaccttactt 2941 acttacttaa ttagagatcg agcagctaag aacgcatgaa aatgaaatgt acaaatgtgg 3001 ttcctaatct agtccctaaa gtcaaaagtg aagaacgaaa gagctacaga aaagaaatcg 3061 aaattgttac gcctagccga gaacttgtgt attatttttt tatatcgctt agattgttcc 3121 cccgaggaaa gcattgaagg aactgtagct aatttatgta cttaatgaac cagtgaaacc 3181 aaaccaatga tttgaaatgg tgtaaagaga agaaacttgc tagtcgccgc tgcataactg 3241 tgtaaatgtg gcacacaaac catttagtta gtgttagtgc tactgtacgt gtaaaataca 3301 attaattgcc tatccagacc cagtaaccac aatttacaag gaagcacaca ccaaacgaaa 3361 ctgaaaacca agaaaacaaa actatttata caattttgta aacaagaact tattaataaa 3421 acaatgaatt tactttgt