Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_166878 2347 bp mRNA linear INV 26-DEC-2023 transcript variant A, mRNA. ACCESSION NM_166878 VERSION NM_166878.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2347) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2347) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2347) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2347) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2347) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2347) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2347) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2347) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2347) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2347) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2347) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2347) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2347) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2347) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2347) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2347) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2347) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2347) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2347) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2347) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2347) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2347) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2347) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_166878.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2347 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2347 /gene="Naa30A" /locus_tag="Dmel_CG11412" /gene_synonym="cg11412; CG11412; DmAAF45606; Dmel\CG11412; EG:8D8.6; Naa30; NAA30" /note="N(alpha)-acetyltransferase 30 A" /map="1F3-1F4" /db_xref="FLYBASE:FBgn0024362" /db_xref="GeneID:31079" CDS 387..1520 /gene="Naa30A" /locus_tag="Dmel_CG11412" /gene_synonym="cg11412; CG11412; DmAAF45606; Dmel\CG11412; EG:8D8.6; Naa30; NAA30" /EC_number="2.3.1.-" /EC_number="2.3.1.255" /note="CG11412 gene product from transcript CG11412-RA; CG11412-PA; Naa30A-PA; N(alpha)-acetyltransferase 30" /codon_start=1 /product="N(alpha)-acetyltransferase 30 A, isoform A" /protein_id="NP_726727.1" /db_xref="FLYBASE:FBpp0070202" /db_xref="GeneID:31079" /db_xref="FLYBASE:FBgn0024362" /translation="MADAQAAAAGKKKYKNKKNSAEKNPNHNPNSSGQVEAQTPSNGH VQHQEEEATEDQEPAQELRGLLKKMHLCNGHGHKEQEARPLGEVVNGHAHGHSNNNHI RCTSGSSNNNNSTHNNNSVDSSNNNRKQRREGGDGGGSDSNSLKPEEKPITATSKTTA NIHPTTTTDPKPKVSEDVAVEQGVHVATGSGHSREQERKQPPSDYAEGATPTITAQLQ LPEPAISADEIVYKEYEAEHQMHDIMRLIQAELSEPYSIYTYRYFIYNWPKLCFLASH DNQYVGAIVCKLDMHMNVRRGYIAMLAVRKEYRKLKIGTTLVTKAIEAMLADNADEVV LETEMRNQPALRLYENLGFVRDKRLFRYYLNGVDALRLKLWFR" misc_feature 1104..1445 /gene="Naa30A" /locus_tag="Dmel_CG11412" /gene_synonym="cg11412; CG11412; DmAAF45606; Dmel\CG11412; EG:8D8.6; Naa30; NAA30" /note="Acetyltransferase (GNAT) family; Region: Acetyltransf_1; pfam00583" /db_xref="CDD:395465" misc_feature order(1290..1298,1326..1331) /gene="Naa30A" /locus_tag="Dmel_CG11412" /gene_synonym="cg11412; CG11412; DmAAF45606; Dmel\CG11412; EG:8D8.6; Naa30; NAA30" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" ORIGIN 1 gctgttacag ctgttcgcgc atatgtgtgg gtgggattta ttcatagcaa ggaaaattac 61 gagttttgcg gatataggat tttacataag tttgccatgc acacgcacta gcgccacaaa 121 tcgagatcgg attgatcgat ccggaactcc gaatatcgga agcacaacaa agaggacggc 181 cgactgcccc atgtgtgcgt gcgcgagtgt gtgagtatgt gcgtgagcgt gtgcgtgtgc 241 gtgtgaatga aaaaccatca actgtgaaaa tataaccaaa aataagtccg aggcacacgg 301 ttgcaggcga ggattaccag tcctcccaga taagccccgg aggagcagca ggttccctct 361 tagagccaat tccgtcgctt ttcagaatgg cggatgccca ggcagcggcg gccggaaaga 421 agaagtacaa gaacaaaaag aactcagcgg agaagaaccc caatcacaat ccaaattcca 481 gtggccaggt ggaggcacag acacccagca atggacacgt tcagcaccaa gaggaggagg 541 cgacggaaga ccaggagcca gcgcaggaac tcagaggcct gcttaaaaag atgcaccttt 601 gcaatggcca tggtcacaag gagcaggagg ctcggccgct tggggaggtc gtcaatggcc 661 atgcacatgg gcacagcaac aacaatcaca ttcgctgcac aagcggcagc agcaacaaca 721 acaacagcac tcacaacaac aacagcgtgg acagcagcaa caacaaccgc aagcagcgaa 781 gagaaggagg cgacggcgga ggatcggatt cgaactccct caaaccggag gagaagccca 841 taacagccac aagcaaaacc actgccaaca tacacccaac cacaacgacg gacccaaaac 901 caaaagtgtc ggaggatgta gctgtggaac agggagtgca tgtggcgacg gggagtggcc 961 acagtcggga gcaggagagg aagcaaccgc cctccgacta tgcagagggg gccacgccca 1021 ccattacagc acagctccaa ctgccggaac ctgccatttc agccgacgag atcgtatata 1081 aggaatacga ggctgaacac caaatgcatg acatcatgcg actgatccag gcggagctgt 1141 ccgagccgta ctcgatatac acgtatcgct acttcatcta caattggcca aaactctgct 1201 tcctcgcctc gcacgacaat cagtacgtgg gcgccatcgt gtgcaagctg gatatgcaca 1261 tgaacgtgcg gcgcggctac atcgccatgc tggccgtgcg caaggagtat cgcaagctca 1321 aaatcggcac cacgctggtc accaaggcca tagaggcaat gctggccgac aatgccgacg 1381 aggtggtgct tgagacggag atgcgtaacc agccggcttt gcggctctac gagaacttgg 1441 gcttcgtgcg agataagcgg ctgttccgct actatcttaa cggggtggac gcgctgcggc 1501 tgaagctctg gtttagatga gtggacccgg cggctgccgt tgaaattgtt gtctaagtag 1561 ccgccgaaga tgtcgagatc tgcgctctgc ggaggaccag ggcgctcccc tcgtcctggg 1621 tcctggccag ctggcagctt gtatcggcgc cctctttttt gtacctattt aactaggaag 1681 catcgtagca tcagtttatt ttctccccaa ctcacaccgt cccttgtctc tctttcattt 1741 gtaaattatt ttattatgta gcagcagcag tacgagcaac atctgctaca tatgcaggag 1801 cagcacgagc agcacacaac ggacccgaaa tttggttaat tttacaggag gcaattttgt 1861 atgcaatacg tgatttacat gcataaaatt aagcattaaa gtcgtaagca agcaattagt 1921 tatgtacatt aaacaatcta caaaaaccaa tctagggaat agacaacaac atgaagcagc 1981 agcgcagcac acgctcatcg acgcccattt acaaagctat aaacatagta tcaaattttg 2041 taaaaagatc aatcaaagcg atgatcgcgc aagtcgaacg ataaactcga tcatgtatat 2101 caaaataaac gcaattggaa ccaagagctg agaacagaca cacaaaaatg cagcctcata 2161 tgcatacttg tatacaaacc ttcaatgggt ggatggcggt ggtcctcgcg gctaagaaaa 2221 ctcgccatct ggtcttaagt aacctctctg tgctctccag aaacacgtaa cacgtagcga 2281 taaggataaa gatgtggtgg atcccgagta acattgaaag aacgcaataa aatcttcaac 2341 aaatgcg