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LOCUS NM_166865 2880 bp mRNA linear INV 26-DEC-2023 C (CG32815), mRNA. ACCESSION NM_166865 VERSION NM_166865.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2880) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2880) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2880) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2880) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2880) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2880) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2880) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2880) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2880) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2880) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2880) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2880) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2880) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2880) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2880) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2880) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2880) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2880) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2880) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2880) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2880) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2880) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2880) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On May 8, 2012 this sequence version replaced NM_166865.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2880 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2880 /gene="CG32815" /locus_tag="Dmel_CG32815" /gene_synonym="CG16994; CG18830; Dmel\CG32815" /map="1D2-1D2" /db_xref="FLYBASE:FBgn0052815" /db_xref="GeneID:318224" CDS 320..1468 /gene="CG32815" /locus_tag="Dmel_CG32815" /gene_synonym="CG16994; CG18830; Dmel\CG32815" /note="CG32815 gene product from transcript CG32815-RC; CG32815-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_726709.2" /db_xref="FLYBASE:FBpp0298010" /db_xref="GeneID:318224" /db_xref="FLYBASE:FBgn0052815" /translation="MYKTIRHGENSLQYTILPQNDDFRIEGKLSGSGRSGSAGGGASS TASVKAKGQRRRRSFFAYLGLIFVCTVIIGAVLIPFLVSAECLPNPAEWFLKTKAALI HSPQPGGGDSAGTSSILPTGSPFLQQNVGRNVKIVNRNGIEQFVIRVNKTNPSASTTR STTTGPNIVATSSSSSSSTSTTTTTTTAPAPTSTSTTTTTTREPPVTTPRYPAPPPPP PATTITTRIIQVPLLKSAAKKPIMPPVLAKVQGPQIQAGGGQNSRLQVQAGTEHESQS KLESESQSEGGGQKSNGAWIKTHWAYIDPSTYFQWSGYKDEDSVLLPALLGFALIGVI LIITVCLVARNKRTIVSSVRKRNRNDIEEQGAEDNATLLTTTNLSDDD" ORIGIN 1 agtgcgcaag gagcatcagc atcagcagca ggaacaggaa caggacaaaa acaatattcc 61 ccaaggactc caacagaacg cacagcacct tccgttgagg ccgagaaagc cacattcgat 121 tggcaggagc ttcgaggaca gaggatacgc agctaccagg tctgcagccc gcaagagtga 181 acattgagga tttgctgtcg caaagggccc atctgaggct ctgagcagcc aggtgaacca 241 gtcaggtcca gggaagaaag ctccagagga tcgaggcagc cgcggaagca tcccaagcgc 301 atacgaagaa caggacaaga tgtacaagac catcaggcac ggggagaaca gcttgcagta 361 cacgattctg ccccagaacg acgacttccg catcgagggc aagctctcgg gctcgggacg 421 atcgggctcc gccggcgggg gagcctcctc caccgcctcc gtcaaggcca agggccagcg 481 acgccggcga tccttcttcg cctacttggg cttgatcttc gtgtgcaccg tgatcattgg 541 cgccgtgctc atacccttcc ttgtgtccgc cgaatgtctg ccgaaccccg cagaatggtt 601 cttgaagacc aaggcggccc tgatccacag tccgcagcca ggcggtggag attcggctgg 661 cacttcctcc atactgccca caggatcgcc ctttctgcag cagaacgtgg gccggaatgt 721 gaaaattgtg aaccggaatg gcattgagca gttcgtaatt cgggtgaaca aaaccaatcc 781 gagtgctagc accaccagga gcaccaccac tggccccaac atcgtggcca ccagttccag 841 cagcagcagc agcacctcca ccacaacgac gacgacaacc gctccagccc ccacaagcac 901 aagcaccacc actacgacaa ccagggagcc gccggtgacc actccgaggt acccggcccc 961 gccgccgcct ccgccggcga ccacgatcac cacccgcatc atccaggtgc ccctactcaa 1021 gtccgccgcc aagaagccca taatgccgcc agtgctggcc aaagtccagg ggccgcagat 1081 ccaggccgga ggaggccaaa actccaggct gcaggtacag gcgggcacgg agcacgagtc 1141 gcaatcgaaa ttggaatcgg aatcgcaatc ggagggcgga gggcaaaaga gcaacggtgc 1201 ctggataaag acgcactggg cctacatcga tccatcgacg tacttccaat ggagcggcta 1261 caaggacgag gatagcgtgc tgctgcccgc tctgctgggc ttcgccctca tcggagtgat 1321 tttgatcatc acggtctgcc tggtggcacg caacaagcgc accattgtgt cctccgtccg 1381 caagcggaat cgcaatgaca tcgaggaaca gggcgccgag gacaacgcca ccctgctgac 1441 caccaccaac ctgtcggacg acgactaatt ggagctcgtt cagatgattc cctgttcgcc 1501 ctcggttcca gcttttgatt tccggcctgc ttgagcgatc caaagtcgct ggctgggcca 1561 tcgcccactt cgcccatccg tttgagacac acacgattac ccagacacct ggacctgctg 1621 agatggctcc acgccagctg atccagtatg ctaatcccga tcccgatccc caaatttccc 1681 ctccgcttct ggccatgagg caggcggaag gcggagcaaa gagtaatcca agcacgaaga 1741 agactgtttc tgaaactact gtttagctat ccccaaattt ttccaatgct tgtcttcacc 1801 ccgcactgtc ccccccctct taccaatcac ccatccttac aaaactgtgt gcgtgtgtgt 1861 gctgatagtg tgtgtgtatg tgtgtgtgtg tgatccccaa gatacccgtt acttataaat 1921 atgcataaat gcaagagcta gcttgataac ttgacgtgcg agggatgtgg tggtgtccac 1981 gctggccact gagcccctcc gtgcaccacc aatagctggg ctctcggcac gaagatgtga 2041 caatgttcga tctcatccga agtactttcc aaactaaccg agctttttaa acacaatcca 2101 ccttttgtgt ctgctgttcc tgctgctctg aaaccaattg gtggacgcat cgcggaaaag 2161 ggagcaccga ggcacaaaag caccgaggca cagccctcgg aaaacgcact caaatcaaat 2221 gaaacgtcca gagatatgaa tatttttttg caagcgacta cacctaattt gcagcacagg 2281 caggcgggga tggggatggg gatgcaagtc cgtcttggcc caaaacgctt ggcgattcga 2341 ttcgattcga ttcagatggg acagttgggc agtgagcagt agggcggtga gaaaccgtag 2401 cgggggacta ctgttcgtct atataaactg tgtataactg tgaggcattg acaagtattt 2461 gagatgatct gtatttttgt aagcgtaata tttaaagcgg cagccaataa cgagacaacc 2521 aaatccagag aagcaactat aaagcgtaag atatcgggcg cagcagccaa cacacgcgac 2581 acacaattta tttgctcaac gcagtacaca ccacacatga tacatacagc ataaatgtaa 2641 atatatatat atttatctgc atacatatat atatatacag agtaagttac gcaaagtatg 2701 aggcttgcat ttacatttac gagcgggata tatcctccat atgtatatgt tatcactaat 2761 ttgcaaagct aaactaagtc catatataca aaccaaatat cggaggtgca agtgacgaac 2821 acacactata ttgaatgttt ttgcttgtta aagtaaataa taaaaatgaa aactcgaaat