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LOCUS NM_132595 2853 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132595 VERSION NM_132595.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2853) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2853) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2853) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2853) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2853) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2853) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2853) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2853) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2853) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2853) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2853) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2853) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2853) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2853) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2853) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2853) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2853) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2853) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2853) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2853) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2853) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2853) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2853) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_132595.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2853 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2853 /gene="CG15725" /locus_tag="Dmel_CG15725" /gene_synonym="Dmel\CG15725" /map="11B12-11B12" /db_xref="FLYBASE:FBgn0030417" /db_xref="GeneID:32224" CDS 345..2582 /gene="CG15725" /locus_tag="Dmel_CG15725" /gene_synonym="Dmel\CG15725" /note="CG15725 gene product from transcript CG15725-RA; CG15725-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572823.1" /db_xref="FLYBASE:FBpp0073518" /db_xref="GeneID:32224" /db_xref="FLYBASE:FBgn0030417" /translation="MFTNWLTGSSSSSSSTPIIRSNAAGIVGAGNVTPSGVSATALVM SSPPDVILEVGPAPSNVRFVAHSLVLGMHSGYLRSAIRLDETAAGTAASVSASASISI TGATAASCNPSSSSSAASSSSSAVTTASGELLLYLSNVTADQFAPLLTYMYTGYLDLN VDNIFAVLLATHVLHMPRALEICRSFLARAQTEGYLNGNPAAQLCPVPSIPAKIIRPI PSKATMPNFGFLPLPQAPPSVAPSAQPTAHQPTTGIAPVASASILSSFGTNTQHMEHM EQPIAMLDNEVDEEDVEVFIDSNTVTDNEAEELEPDVDMDCNVSVVSSLAASSAGSMN IERLDVKPPTPIPVSVATIISATTTKSQAQSLGQSKGQNSRRESNSKGNRTKSSASRS RKSSGLQVAKAPVPAAQLDLTAAATPSITSSKFIIDVASCDGPVRFRRILNTAYGHKP EAMESNALAGPATAPAGGSSNSTISEQHRSQQSVSLSFHQQMARAISSQQRQLSHQQQ EESENSGDAIPATIGKQHATGATAASSAMSTSSTHAGSNRKSQATGTGTGSGSATASS AGNQELYVCVYCKHTFKSQYCYQKHAKRHLNPLTLTTNDKKLLMESAASMANTIEMDN PSSVGQSGANNSSGSIATGNGATAVAATTALLRREVRPLDMNVQYYPCKTCGSKFPSY YFVHKHRKMCHADEIEATATSNTSNNSSSNNSSNNNSSSSSGSSGSSSNHAKRDDQQQ QQQQS" misc_feature 489..905 /gene="CG15725" /locus_tag="Dmel_CG15725" /gene_synonym="Dmel\CG15725" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature <918..>1160 /gene="CG15725" /locus_tag="Dmel_CG15725" /gene_synonym="Dmel\CG15725" /note="DNA polymerase III subunits gamma and tau; Provisional; Region: PRK14959" /db_xref="CDD:184923" misc_feature 2061..2129 /gene="CG15725" /locus_tag="Dmel_CG15725" /gene_synonym="Dmel\CG15725" /note="zinc finger; Region: ZnF_C2H2; smart00355" /db_xref="CDD:197676" ORIGIN 1 gcggccaacg agtgaaaacg aatggcagcg aattcctggg ccgaaggacg aaggacgaag 61 gacgaaggac gaaggacgat gagcatgcgg catgttgctg ctgttctggc ttgccgggaa 121 gtataaatac cggagacgca cggccgtcgg ccatcagttc tgcaaacgat ttcactttgg 181 acgcgcgacg cgttggtgct cctgctcctt tcgttcgtcg ttcctcgtcg tccttgccac 241 gaaaatctcg ccacaaaatt cagcttgttt gtttgcattt cttttttttt gttgtttttc 301 tgcttttttt tttttttttt tgattgtgca cgtgcagcaa agcaatgttc accaattggc 361 tgactggcag cagcagcagc agcagcagca cgccgataat tcgctccaat gcagccggta 421 tcgttggtgc cggcaatgtg acaccgagcg gagtcagtgc caccgctttg gtgatgagct 481 cgccaccgga tgttattcta gaggtgggtc cggcacccag caatgtgcgt ttcgtggcgc 541 actccctggt gctgggcatg cacagtggtt acctgcgttc cgccattcgt ttggatgaga 601 ctgccgccgg caccgccgcc tccgtatccg catccgcatc gatatcgata acgggtgcaa 661 cagctgccag ttgcaatcca tcatcatcat catcagcagc atcatcatca tcatcagcgg 721 tcacgacggc atcgggcgaa ctattgctat atctcagtaa tgtgacagcc gatcaatttg 781 caccgctact aacctatatg tataccggtt atctcgatct gaacgtcgac aatatctttg 841 ccgtactgct ggccacccat gtgctgcaca tgccacgggc actggaaatc tgccgctcat 901 ttttggcgcg cgctcaaacg gagggctatt tgaacggtaa tcccgccgcc cagctttgtc 961 cagtgcccag catacccgcc aagatcatcc ggccgatacc gagcaaggca accatgccga 1021 attttggctt tctccccctg ccacaagcgc cgccaagtgt tgcaccttcg gcacaaccaa 1081 cggctcatca accaacaact ggcatcgctc cagttgcttc ggcttcaatt ctaagttcat 1141 ttggcaccaa cacgcagcat atggagcaca tggaacagcc catagccatg ctggacaacg 1201 aagtggatga ggaggatgtg gaggtattta tcgatagcaa tacggtgacg gataacgaag 1261 ccgaagaact cgaaccggat gtggatatgg actgtaatgt ttcggtggta agttctctgg 1321 ccgccagcag tgccggcagc atgaatatcg aacgtttgga tgtgaagcca ccaacaccca 1381 tacccgtgtc tgttgccacc ataatatcag ccactacgac caagtcgcaa gctcaaagtc 1441 ttggtcagtc caaaggtcaa aactctagaa gagagtcaaa ttccaagggt aacagaacaa 1501 aatcctccgc atcccgatcg cgaaaatcca gtggcctgca ggtggccaag gctcctgtgc 1561 cggctgctca attggatttg acagcagccg ccacaccatc gataacatcc tcgaaattca 1621 tcatcgatgt ggccagttgc gatggaccgg ttcgttttcg aaggattctc aacacagcct 1681 acggtcacaa gccagaggcc atggaatcga atgcgttagc tggtcctgcc actgctccag 1741 ctggcggcag ttcaaactca acgatcagcg aacaacatcg cagccaacag agtgttagct 1801 tatcgtttca ccagcaaatg gccagagcca tcagtagcca gcagcggcaa ttgagtcatc 1861 agcagcagga ggagagcgag aatagtggcg atgccatacc agcaacgatt ggtaagcagc 1921 atgcaacagg agccaccgct gcatcgtcag ccatgtcaac atcatcaacg catgctggca 1981 gcaatagaaa gtcacaggca acgggaacgg gaacgggatc gggatcagca accgcatcat 2041 ccgctggaaa tcaggagctc tacgtatgcg tctattgtaa gcatacattt aaatcacaat 2101 attgctatca aaagcatgcc aagcgacatt tgaacccatt gactttgacc accaacgata 2161 agaaactgct gatggaatct gccgcttcaa tggccaacac tatcgaaatg gacaatccat 2221 catcggtggg tcagagtggt gcaaacaatt cgagcggttc gattgcaact ggtaatggtg 2281 caacagctgt tgcagcaaca acagccttgc tgcgacgtga ggttcgaccg ctggacatga 2341 atgtgcaata ttatccctgc aagacgtgtg gcagcaagtt tcccagctac tattttgtgc 2401 acaagcatcg aaaaatgtgc catgcggatg agatcgaggc gacggccact agcaatacga 2461 gcaacaacag cagcagcaac aacagcagca acaacaacag cagcagcagc agcggcagca 2521 gcggcagcag cagcaaccac gcgaaacgcg acgatcagca gcaacaacaa caacaatcct 2581 aaagtaaata gagtacatgc aacaacaaat atggcaattg gcactggcaa aatcaaagca 2641 acgaaattta cgaatttatc tacacctatc acacacacat ctcacacaca cacacacaca 2701 gaatgtgtgt gttttttttt tttttgtcgc tctagaaatg caattgaatt aataaaatgt 2761 acttaaaaac aatcagcatt gcgagcataa tggtgaaaca taatgggtta aatctaggaa 2821 aatacgtaaa tacaagtgca caagtgaaag tgg