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LOCUS NM_132525 3265 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132525 VERSION NM_132525.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3265) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3265) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3265) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3265) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3265) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3265) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3265) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3265) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3265) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3265) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3265) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3265) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3265) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3265) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3265) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3265) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3265) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3265) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3265) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3265) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3265) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3265) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3265) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 31, 2011 this sequence version replaced NM_132525.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3265 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3265 /gene="CG15740" /locus_tag="Dmel_CG15740" /gene_synonym="Dmel\CG15740; i175" /map="10F1-10F1" /db_xref="FLYBASE:FBgn0030340" /db_xref="GeneID:32139" CDS 49..2976 /gene="CG15740" /locus_tag="Dmel_CG15740" /gene_synonym="Dmel\CG15740; i175" /note="CG15740 gene product from transcript CG15740-RB; CG15740-PB" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572753.2" /db_xref="FLYBASE:FBpp0292360" /db_xref="GeneID:32139" /db_xref="FLYBASE:FBgn0030340" /translation="MNFFGAFIALAICALCGLTQADISLKLRQQQQQQQLQQQQQQPL ITKEQYYKTGGGFQESNYGNSGYQIFEVHNHFAAKGPAYLPPQGQGASGHANDDSLDL SFLNFPDAPATAPVATPAAAAPAAAPASIPVPFPSNYQHDFQRKAPATSSLGYSGQAY LPPTAAAPNVQQQQQQQQQVIQQQQEYVQQQQQQVVQQQVIPQQQQQVVQQQQVQQQY SQQNYEAPAYLPPTTSEAVAQPVSNYQLPTTISYQQQQKVFQGPTYLPPQQEQQQQVQ QVQEVQQQQQQVQQIQSVQQQQQQQISVQEQGQEYRAPGYLPPGYEFSNPDQLPVSLS QSVATSQSVSSVQNVATAQSVASVQQSAGEYRAPGYLPPGYDEPRPQAPTQITYQQPQ QQLQQQELQQQQVQQQQVQQQQVQQQQVQQQQLQQQQVQQQQVQQQQVQQQQVYAAPT QATISNPGALPDGYDFVKPENAEAAIAELHSLQTQTKLLKQQQEQQQLLLQQQQQQQQ QLQQQQQQQQLQQQQQQIVVQSQLQVAQQQQNADIVYGRSKSQQQQALAPQSTLATST AGSYQQQFTAPAYLPPTATAPAPSPVAAPAPVSIAAPAPLVAPAPAPAPAPAPVAVVQ TTATSSAYQQQYRASGYLPPAVAAPASVRVAAPVPAPAPAPAPAPLRVAAPASAPVRA VAPAAAPAPAAAPRAPIHVSGPAPIAISLPAPAPTQVTHIHSLRSYMNTVQPFARYAQ PVTLRQQQQYHHVQQQQHHHVQQQQQVIEVAPMYREQSKRPRFYAPAYVSNAVPRQQQ AQHHLHHHYHRVVQSQQKLQPTLSFKAQQSLQKFMPKDVQVAVNVAMAATAPVVAPPA LRGSSRVRTVQIVKPHSTRTFKVLEQLDQAGVKTIKILGASNEQPQGRHQVVKVVTQN AHSGAESHVQTVKIYDDVQQPLRLLPQSQPQSNAYLPPARPRSRIVRQASKPLRLHPV ASL" ORIGIN 1 atcattgatc ggttggacat cgagggctca agcacgacca ctgtgaagat gaatttcttt 61 ggcgccttca ttgcgctcgc catctgtgca ctatgcggat taacccaagc ggatatatcg 121 ctcaagttgc gacagcaaca gcagcagcag caactgcagc agcagcaaca acagccgctg 181 atcaccaagg agcaatacta caagaccggc ggtggcttcc aggagagcaa ctacggcaat 241 tccggctatc agatctttga ggtgcacaat cattttgcgg ccaagggacc cgcctatctg 301 ccgcctcagg gtcagggtgc aagtggtcat gccaacgatg atagcttgga cttgagcttc 361 cttaactttc ccgatgcgcc agctacagcg ccagttgcca ctccggctgc agctgctcct 421 gcagcagctc ctgcgtctat tcccgtgccc ttcccttcga actaccagca tgatttccag 481 cgcaaagctc cggctacatc ctcgttgggt tacagtggtc aggcctatct accacccacg 541 gctgccgcac ccaatgtcca gcagcagcag caacagcagc agcaagtgat tcagcagcaa 601 caggagtatg tgcagcagca gcaacagcaa gtggtgcagc agcaagtgat tccgcagcag 661 caacagcaag tggtgcagca gcaacaggtg caacagcagt acagccaaca gaactacgag 721 gcaccagcat atctgccacc caccaccagc gaggcagttg ctcagccagt gtccaactac 781 cagctaccaa ctaccatcag ctatcagcag caacagaagg tcttccaagg accaacatat 841 ctgccaccac agcaggaaca gcagcagcag gtgcagcaag ttcaagaggt gcaacagcag 901 cagcagcaag tgcagcagat tcaatccgtt cagcagcagc aacagcagca gatttcagtt 961 caggaacagg gtcaggaata ccgtgctcct ggctatctgc cacctggcta cgagttctcc 1021 aatcccgatc agttgcccgt ttcgctcagc cagagtgtcg ccacctcgca gagtgtgtcg 1081 tccgttcaaa atgttgccac cgcacagagt gttgcatccg tgcagcagtc tgccggcgag 1141 tatcgtgctc ctggctatct gccacctggc tacgatgaac cacgtcctca ggcaccaact 1201 cagatcacgt accagcagcc acagcaacag ctgcagcagc aagagttgca gcagcaacaa 1261 gtgcagcagc aacaagtgca gcagcaacag gtgcagcagc aacaagtgca gcagcaacag 1321 ttgcagcagc aacaggtgca gcagcaacaa gtgcagcagc aacaggtaca gcagcaacag 1381 gtgtatgctg ctcctacaca ggcaaccatt agcaatcctg gtgcccttcc cgatggctat 1441 gatttcgtta agcccgaaaa tgccgaggcc gccattgccg agctgcacag cctgcagact 1501 caaaccaaac tgctgaagca acagcaggag cagcagcagt tgctcttgca acagcagcag 1561 cagcaacagc aacagctgca gcagcagcag caacagcaac agctgcagca gcagcagcaa 1621 cagatcgtgg tgcagtctca gttgcaggtt gcccagcaac agcaaaacgc agacatcgtc 1681 tatggtcgct ccaagtcgca gcagcaacaa gctttggctc ctcaaagtac acttgcaaca 1741 tctactgccg gcagctatca gcaacagttt acggctcctg cttacctgcc tccaactgcc 1801 accgccccag ctccatcgcc agttgcggct cctgctcccg tttccattgc agctcctgct 1861 cccctggttg ctcctgcccc tgctccagct ccagctccag cccctgttgc cgtagtccag 1921 acgacagcca cttcaagtgc ctatcaacag caatacaggg cttctggcta tctgccacca 1981 gcagtggccg ctcctgcttc tgtccgagtt gctgctccgg ttccagctcc ggctccagct 2041 cctgctccag ctcctctgcg agttgctgct cctgcttccg ctcccgttcg agctgttgct 2101 cctgctgcag cgccagcgcc cgctgccgct cctcgcgctc ccatccacgt gagtggaccc 2161 gctcccattg ccatttctct gccagctcca gcgcccaccc aggtgacgca cattcactcg 2221 ctgagaagct atatgaacac cgtgcagccc ttcgcacgct atgcacagcc agtcactcta 2281 cgccagcagc agcagtatca tcatgtccag cagcagcaac atcatcatgt ccagcagcag 2341 caacaggtga tcgaggtggc gcccatgtac cgtgagcaat caaagcgtcc tcgattctat 2401 gcccccgcct acgtaagcaa cgctgtgccc cgccagcagc aggcacagca ccacctgcac 2461 caccactacc accgcgtggt gcagagccag caaaagctgc agcccacgtt aagctttaag 2521 gcgcagcaat cgctgcagaa attcatgccc aaggacgttc aggtggcggt aaatgtggcc 2581 atggcggcaa cggcacccgt cgtggcacca cccgcactgc gtggcagctc ccgtgtgcgc 2641 accgtgcaaa tagtgaagcc acattccaca cggaccttca aggtgctgga gcaactcgat 2701 caggctggtg tgaagacgat caaaattctg ggagcgagca atgagcagcc gcagggacgc 2761 catcaggtgg tcaaggtggt cacacagaat gcgcacagtg gtgcggagag tcatgtgcag 2821 accgttaaga tctacgacga tgtgcagcag ccattgcgat tgctgccaca gtcgcagcca 2881 cagagcaatg cgtacttgcc accggcgcgt cccaggtcgc gaattgtgcg gcaggcgtcg 2941 aagccactgc gtctgcatcc cgtggccagt ctgtagagga ttggattccc agcactgatt 3001 agttgttaat atctatctca tcatccagcg tctgcactgc actgctatat atttctttct 3061 atatatatat atattttttt tttttgttgt gcattttagt ttgcgttcca attctgttgt 3121 caatgtttcc aactcatttc gcatgaaatt tctgtgcaca aaaacaagcg attccaaata 3181 gccaaatcat tggcattcga aatcaaatca tttgcatgca ataacaaccg atacgaattt 3241 cttacctaat aaatttatac ttacg