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LOCUS NM_132472 2831 bp mRNA linear INV 26-DEC-2023 C (CG44422), mRNA. ACCESSION NM_132472 VERSION NM_132472.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2831) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2831) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2831) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2831) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2831) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2831) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2831) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2831) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2831) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2831) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2831) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2831) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2831) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2831) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2831) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2831) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2831) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2831) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2831) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2831) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2831) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2831) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2831) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_132472.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2831 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2831 /gene="CG44422" /locus_tag="Dmel_CG44422" /old_locus_tag="Dmel_CG11105" /old_locus_tag="Dmel_CG12625" /old_locus_tag="Dmel_CG34144" /old_locus_tag="Dmel_CG42683" /gene_synonym="CG11105; CG12625; CG34144; CG42683; Dmel\CG44422; Dm_X:57642" /map="10B1-10B2" /db_xref="FLYBASE:FBgn0265595" /db_xref="GeneID:32063" CDS 658..2010 /gene="CG44422" /locus_tag="Dmel_CG44422" /old_locus_tag="Dmel_CG11105" /old_locus_tag="Dmel_CG12625" /old_locus_tag="Dmel_CG34144" /old_locus_tag="Dmel_CG42683" /gene_synonym="CG11105; CG12625; CG34144; CG42683; Dmel\CG44422; Dm_X:57642" /note="CG44422 gene product from transcript CG44422-RC; CG44422-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_572700.2" /db_xref="FLYBASE:FBpp0309296" /db_xref="GeneID:32063" /db_xref="FLYBASE:FBgn0265595" /translation="MAGPQVQHSQRPNSAYYTGLNGGSGSGGGGGGGGAGGGGAGGGS SAGMSSSASHTGLHALRQVSNETELIYRGSHSNGTVNELPSSAQHHLLTGRAVQQHQQ QQQMHHQTVSSIAGTGSSVTDALISTINSGGGGGGPSGSSCSTAALGIKKSSTQRSIE IIVDASQCGKELVASGPGSGAAGSGAAIVSTLDVEDVEQGGGGQESSSSHRKSSRHRH RPLHRRLITYLRNLFQGSTTQNAVKTLLVAWGCIAKHSELEEFETPARYRPDSLSALS RATRFTEDEIKRIYRGFKAECPTGVVKEDTFKVIYSQFFPQGANPTLYAHYVFNTLDQ DHSGIVSFEDFVQGLSILSRGSVEEKLRWTFSLYDINGDGFITREEMTDIVTAIYELM GRLPDECPEEEKIKGKVEQIFQKMDTNRDGVVTLEEFLEACRNDDAISRSMSVFDTAF " misc_feature <1627..1959 /gene="CG44422" /locus_tag="Dmel_CG44422" /old_locus_tag="Dmel_CG11105" /old_locus_tag="Dmel_CG12625" /old_locus_tag="Dmel_CG34144" /old_locus_tag="Dmel_CG42683" /gene_synonym="CG11105; CG12625; CG34144; CG42683; Dmel\CG44422; Dm_X:57642" /note="Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]; Region: FRQ1; COG5126" /db_xref="CDD:444056" ORIGIN 1 tcagttctcg ttcagctttg ccgacggcac gacgtgcttt actagcgaaa agaaaaaaac 61 tagaaaaact ggggaaaatc tgggaaaatt actcgtcgtc ttgtcaattg gcgcgggcca 121 acaaaaaaag ctaacttaaa aaataaaata aaaaacattt tgaagttgta atcgaaaaac 181 gaaatataga acaattcctg ttatgcacta agagaaacaa tgtgaatagc gaaaaagtaa 241 gcagagaaat ccatagaaaa atacttaaat atatacagat ccataaacaa accgatttat 301 atatattcga gtcgggcgtt tgattgattt gtggcaacta tctcaaacaa caaaacaaaa 361 aaataaaacg aaaaacgaaa aaagcaacag caagtcagca aaaacaacaa ggacaacaac 421 aactacaaca acaacaacaa caacgattgc ggatgcggca ccgcttaacc ccaatctgcc 481 taacaaagtg accgccgtaa ccatgtaact gtccaatatg ctactaaaac cactaaaacc 541 agccagcgac aattaaagcc agccgctaga gaggatcggg agcaggaaca ggagcagcag 601 aaggaggtgg aactctagcc gctccagcag tacataacat acactgagag aaacattatg 661 gccgggccac aggtgcagca cagccagcga ccgaatagcg cctactacac gggtctaaat 721 ggtggttccg gcagcggcgg cggcggagga ggaggaggag ctggaggcgg cggcgcaggt 781 ggtggatcct ccgccggaat gtcaagcagt gcatcgcaca ccggactgca tgccctgcgc 841 caggtgagca acgaaacgga gctcatctat cgtggaagcc acagcaatgg caccgtcaac 901 gagctgccct cgagcgccca gcatcacctg ctcacaggtc gagcggtcca gcagcaccag 961 cagcagcagc agatgcatca ccagacggtg agcagcatcg ctggcaccgg atccagtgtc 1021 acagatgccc tcatcagcac cattaactcc ggcggtggcg gtggtggtcc ctccggcagc 1081 agttgctcca cggcggcatt gggcattaaa aagtccagca cgcaacgcag catcgagatt 1141 attgtggacg ccagtcagtg cggcaaggag ctggtggcca gtggtccggg ttcgggtgca 1201 gcgggctcgg gggcagcgat tgtctccacc ctggacgtgg aagatgtgga gcagggcggt 1261 ggcggtcagg agtcctcctc ctcgcatagg aaatcatcgc gccatcggca tcgaccgctc 1321 caccggcggc tgatcacgta tctgcggaac ctcttccaag gcagcaccac acagaatgct 1381 gtgaaaactc tgctggttgc ctggggctgc atcgcaaagc attcggaact ggaggagttc 1441 gaaacgccgg caaggtacag gcccgactcg ctaagtgcac tgagccgtgc cacacgcttc 1501 acggaagacg agatcaaacg aatttatcgg ggatttaagg ctgagtgccc gacgggcgtc 1561 gtcaaggagg acaccttcaa agtgatctac tcgcagttct ttccacaggg agccaatcca 1621 accttatacg cccactatgt atttaataca ctggatcagg atcacagcgg cattgttagc 1681 ttcgaggact ttgttcaagg actttcgata ctgtctcgcg gctccgtgga ggagaagctg 1741 cgctggacct tctcgctgta cgacatcaat ggcgacggct tcattacgag ggaggaaatg 1801 actgacattg taactgccat atacgagctg atgggccgcc tgccggacga gtgtcccgag 1861 gaggagaaga tcaagggcaa ggtggagcag atcttccaga aaatggatac caatcgcgat 1921 ggcgtggtca cgctggagga gtttctggag gcctgtcgca atgacgacgc catctcccgg 1981 tcgatgtccg tgtttgacac agcgttctga ccatatccga cggacaaggg cgatgagtac 2041 acggtgcccc ggcggcggcg acatcagctg tcggcacagc agcagcatct gcagcatcag 2101 aagcatcagc agcaggagcc agagaaacgt aagtccaacc acaagacgaa gaacaagcaa 2161 cagcaaaaac agcagcaacc acatagcact agacatcaaa actgttgtca cataatcgac 2221 atggatggcg atagcaccac aagcaccacc accgcctcgg cggccactgg aacaacactc 2281 aattgcaatg tcctatatga ttacggagcg gcggaggagg atgacgacga ccaggacgag 2341 gatgatgagg actccgatga ggagtacaga tcctttgtct gccgccactg ccaaaggtca 2401 cagtcagtgg tgcagcagcc cagatccaat cgtcgatcgc aatcgcagtc caagtcgcgc 2461 aagcgcagca agagcaggaa gcgccatcag agcaaacagg gtcaccatca gggccagcag 2521 ggccatcagg gtcaccatgg tcagcagctg acccggtggc cggaaatcaa tgtggccaac 2581 gagcaggcca ttcgcttccg gtgtccgcag gtggggccgc aggtgggtcg cgacctccac 2641 accccccagc ccatgcactt ccatcatccc cagtcgcaga gccagaaggc caagagcaag 2701 tcccggccgc ggaagcaccg ggcatgccca cctgcttcgc tatcgaaagc tggagcagca 2761 gcagctgcag cagcacctgg tccacctgca ccacctgcgc caccagcaga tccgtcacag 2821 ctaccgccct c