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LOCUS NM_132456 1818 bp mRNA linear INV 26-DEC-2023 C (CG42249), mRNA. ACCESSION NM_132456 VERSION NM_132456.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 1818) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1818) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 1818) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 1818) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 1818) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 1818) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 1818) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 1818) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 1818) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 1818) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 1818) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 1818) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 1818) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 1818) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 1818) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 1818) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 1818) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 1818) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 1818) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 1818) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 1818) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 1818) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 1818) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_132456.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1818 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..1818 /gene="CG42249" /locus_tag="Dmel_CG42249" /old_locus_tag="Dmel_CG11126" /old_locus_tag="Dmel_CG1961" /gene_synonym="CG11126; CG1961; Dmel\CG42249" /map="10A4-10A4" /db_xref="FLYBASE:FBgn0259101" /db_xref="GeneID:32043" CDS 72..1748 /gene="CG42249" /locus_tag="Dmel_CG42249" /old_locus_tag="Dmel_CG11126" /old_locus_tag="Dmel_CG1961" /gene_synonym="CG11126; CG1961; Dmel\CG42249" /EC_number="3.-.-.-" /EC_number="3.1.-.-" /note="CG42249 gene product from transcript CG42249-RC; CG42249-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_572684.2" /db_xref="FLYBASE:FBpp0288788" /db_xref="GeneID:32043" /db_xref="FLYBASE:FBgn0259101" /translation="MATACNRLTWSLVVVVAVMAVMCSSAEAADKEGFPVAIIHINDL HARFEATDTSGGTCDEGEECIGGYPRTVYTVKRLLQEQAELNPIYINAGDSFQGTLWY NIGRWNVTQQLLNLLPADVMTLGNHEFDHGVEGVVPFLETVDTNMLVANMDCAHEPTM EGKYNKSMIIERSGRKIGVIGVILETTYDLANTGKVIFRNESDTIREEAQLLKAQGAN IIIVVSHCGYDVDQQIAANAGDWIDVIVGSHSHTFLYTGDPPGPHTPSGDYPTEVIHS SGHRVLIVQASAYARYVGNLIVYFDDNGDVLDYEGDPLYMDQSVPEDDIVLQAMVPWQ LEMKPIAERTVGQSRVNLQQSQCSSGECNLGNFFTDAMLHAFVKDASSSSEESWSNVT IALTSTGTFRVPIPAGNITYKQLFAMCPWQNRLVTLSLRGKHIVELLEHVVAPMNASS ATPRSSRFLQVSGLRIRYDLNADQRVFSVRVRCSKCLVPRYIPLDLEHKYRVVVMEYL ANGKNGFSVISENAEDPEFGPFDLDALMDYMNSTGPITTAIEQRIQFVTT" misc_feature 177..1019 /gene="CG42249" /locus_tag="Dmel_CG42249" /old_locus_tag="Dmel_CG11126" /old_locus_tag="Dmel_CG1961" /gene_synonym="CG11126; CG1961; Dmel\CG42249" /note="CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain; Region: MPP_CD73_N; cd07409" /db_xref="CDD:277354" misc_feature order(198..200,204..206,351..353,447..452,459..461, 639..641,744..746,816..818,822..824) /gene="CG42249" /locus_tag="Dmel_CG42249" /gene_synonym="CG11126; CG1961; Dmel\CG42249" /note="active site" /db_xref="CDD:277354" misc_feature order(198..200,204..206,351..353,447..449,744..746, 816..818,822..824) /gene="CG42249" /locus_tag="Dmel_CG42249" /gene_synonym="CG11126; CG1961; Dmel\CG42249" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277354" misc_feature 1104..1631 /gene="CG42249" /locus_tag="Dmel_CG42249" /old_locus_tag="Dmel_CG11126" /old_locus_tag="Dmel_CG1961" /gene_synonym="CG11126; CG1961; Dmel\CG42249" /note="5'-nucleotidase, C-terminal domain; Region: 5_nucleotid_C; pfam02872" /db_xref="CDD:427027" ORIGIN 1 tcgcttgcga tcttcaaaat caaatcgata actgtgaagt gcaggtgcag attctggtgc 61 gttggagtaa aatggcaacc gcttgcaatc gactgacatg gtcgctggta gtggtggtgg 121 cggtgatggc ggtcatgtgc tcatccgcgg aggctgccga caaggagggc tttcccgtgg 181 ccataatcca cataaatgat ttgcacgcca ggttcgaggc cacggacacc tccggtggca 241 cctgcgacga gggcgaggag tgcatcggtg gctatccgcg caccgtttac accgtgaagc 301 gtctgcttca ggagcaagcg gagctcaatc ccatctacat caatgccggc gacagttttc 361 agggcacgtt gtggtacaac atcggtcgat ggaacgttac gcagcagctg ctgaaccttc 421 tgcccgccga tgtgatgacc ctcggcaatc acgagttcga tcacggtgtg gagggcgtgg 481 tgccattcct agagacggtg gacaccaata tgctggtggc caacatggac tgcgcccacg 541 agcccaccat ggagggcaag tacaacaagt cgatgataat cgagcgatcg ggccgcaaga 601 ttggtgtgat tggtgttatc ctggagacaa cctacgatct ggccaatacc ggtaaggtga 661 tctttcgcaa cgagagcgac accattcgcg aggaggcgca gctgctgaag gcccagggtg 721 ccaacatcat cattgtcgtc tcccactgcg gctacgatgt ggatcagcag atcgctgcga 781 atgccggcga ttggatcgac gtcatcgttg gctcccattc gcacaccttc ctctacacgg 841 gtgatccgcc tgggccacac acgccatccg gtgattatcc caccgaggtt atccacagct 901 ctggccaccg cgtgctcatt gtccaggcat cggcctatgc ccgctacgtg ggcaacctga 961 tcgtctattt cgatgacaac ggcgatgtgc tggactacga gggtgatccg ctctacatgg 1021 accaatccgt gccagaagat gatatcgttc tacaagccat ggtgccttgg caactcgaga 1081 tgaaacccat tgccgagcgg acagtgggcc agagtcgcgt gaatctccag cagagtcagt 1141 gcagcagtgg ggaatgcaat ctgggtaact tcttcaccga tgctatgctt catgcgtttg 1201 tcaaggatgc ttcatcgtcg tctgaagaga gttggagtaa cgtgaccatt gccttgacat 1261 caacgggaac ttttcgagtg cctattccag ctggcaacat cacctacaag caattgtttg 1321 ccatgtgccc atggcagaat agactggtga ccctcagtct gcgtggtaag cacattgtgg 1381 agctgctgga gcatgtggtg gcgcccatga atgccagttc ggccacgccg cgttcctccc 1441 gattcctcca ggtttccggt ctccgtatcc gttacgattt gaacgccgat cagcgagtat 1501 tcagtgtgcg agtaagatgc tccaagtgcc tggtgcccag gtatattcca ctcgatttgg 1561 agcacaagta ccgcgtggtc gtcatggagt acctggcgaa tgggaagaac ggatttagcg 1621 taatcagcga aaatgcagaa gatccagagt ttggtccttt cgacttggac gccttaatgg 1681 actacatgaa ctccaccggg ccaattacga ctgcaatcga gcaaaggatt cagtttgtaa 1741 ctacttagac tttatagtat ggtcgaaaaa tgtagtaaac ctatataata aaatatacat 1801 atgtatggtt tcattttg