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LOCUS NM_132416 2805 bp mRNA linear INV 26-DEC-2023 mRNA. ACCESSION NM_132416 VERSION NM_132416.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2805) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2805) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2805) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2805) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2805) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2805) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2805) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2805) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2805) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2805) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2805) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2805) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2805) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2805) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2805) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2805) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2805) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2805) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2805) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2805) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2805) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2805) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2805) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_132416.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..2805 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..>2805 /gene="CG2111" /locus_tag="Dmel_CG2111" /gene_synonym="Dmel\CG2111; pepCG2111" /map="9E1-9E1" /db_xref="FLYBASE:FBgn0030223" /db_xref="GeneID:31995" CDS 10..2805 /gene="CG2111" /locus_tag="Dmel_CG2111" /gene_synonym="Dmel\CG2111; pepCG2111" /note="CG2111 gene product from transcript CG2111-RA; CG2111-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572644.1" /db_xref="FLYBASE:FBpp0071421" /db_xref="GeneID:31995" /db_xref="FLYBASE:FBgn0030223" /translation="MHLSYLTILTALFFHLEANKTAVGRLPKWLVPLSYRVDIVTRIN QPYQPFGGTVVIDLRSERSTKRIVLNAHDLAIGKRRAVTLSDKNGNSVPVSSIQMDIK LSRLTVSLKRPLKVNVTYSMRVAFTSVLRNDNTGFYSSNYVDHNTTLTQWLAATQFEP NHAREAFPCFDDPIFRTPFKINLAHPYLYRALSNMPVQRTIRHASLKDYVWTQFVESH PMQTYLVAFMISKFDRPGFTSSERSDCPISTWARPDALSQTEFANMVVAPLLSFYEDL FNSTYRQKKIDLVALPDFTFKSKENWGLPAFAEESLLYDSQRSSIDDQQGVARAVAMM VVNQWFGNLVSVAWWHEIWLKNVFALYLSRFGVHSLRPEWDYQERHALQLYLSVLDYD AHVNTDLVTASVPDESHIWAAYNEIGERKAAVLFEMLHRVMGEEAWLTALRRYLVVYA NRTATSSDFWDLLQLQVDRNGRLGKGLNITRIMKCWLGQPGYPLVTVTRNYDHRTAIV SQQRFFITPQFRNRWARNPCWWVPLSYTCPSCQHSEIISFSRWLTCPTSKPSSKSNTV LLEKLEAEPTDWILFNVQHTAPFRVNYDLRNWQLLNKTLADPNKFRLIHRVNRAQLVD DLFSLAWSGDIEYDMALGILGYLEHEDEFVVWVATEISFERINNVAKSNPNYLIFKTY MRLLLERQFKRVISSDLTSSSGNMTHRPVIIRLACEYELPACVSLARREFMKGTPEKG GWMTIRERETVVCTAVKFGTEGDRDMVESMYKRSNFAAEKESLLTALACSRNVFALQR VLIWTFESSGVRKQNARRTFKAVVSNSMGYRLAKKYVSVNMQNIRNYCSNSTDKVVNL MTPLIECLSTPKELLYFSKFFKEILRDMNGSERLIKILLERGNDNIHWQRTKFRPMLQ AIRDIILWRSRAKRILK" misc_feature 106..1470 /gene="CG2111" /locus_tag="Dmel_CG2111" /gene_synonym="Dmel\CG2111; pepCG2111" /note="Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); Region: M1_APN-Q_like; cd09601" /db_xref="CDD:341064" misc_feature order(478..480,484..486,898..909,1006..1011,1018..1020, 1075..1077,1087..1089,1249..1251,1264..1266) /gene="CG2111" /locus_tag="Dmel_CG2111" /gene_synonym="Dmel\CG2111; pepCG2111" /note="active site" /db_xref="CDD:341064" misc_feature 1741..2700 /gene="CG2111" /locus_tag="Dmel_CG2111" /gene_synonym="Dmel\CG2111; pepCG2111" /note="ERAP1-like C-terminal domain; Region: ERAP1_C; pfam11838" /db_xref="CDD:463368" ORIGIN 1 attgaaatca tgcacctaag ctacctgaca atactcaccg ccctgttttt ccacctagaa 61 gctaacaaaa ccgctgtcgg tcgccttcca aagtggttgg taccgcttag ctatcgcgtg 121 gacatcgtga cacggatcaa tcaaccctat cagcccttcg gcggtacggt ggttattgat 181 ctgagatcgg agagatcgac gaaaagaata gtgcttaatg cccacgattt ggcgattggc 241 aagcgaaggg cggtgacgtt gtctgacaag aatggcaact cagtgccggt tagcagcata 301 cagatggaca ttaagcttag tcgactgact gtgtcattaa agagaccact caaggtcaac 361 gtcacatact caatgcgggt ggcatttact agtgttttga gaaatgacaa cactggattc 421 tatagcagca attatgtgga tcataatact actttaaccc aatggctggc ggccacccaa 481 ttcgaaccga atcatgcacg cgaggcattt ccctgcttcg acgatcccat tttcaggaca 541 ccattcaaga tcaatctagc ccatccgtat ctgtaccgcg ctctgtccaa catgcccgtc 601 cagcggacca ttcgccatgc cagcctgaag gactacgtgt ggacgcagtt cgtcgagagc 661 catccgatgc aaacgtacct ggtggccttc atgatcagca agttcgatag gccgggtttc 721 acgtccagcg agcgatcgga ttgtccaatt agcacgtggg cacgtccgga tgcactgtcg 781 cagactgagt tcgccaacat ggtggtggca ccgctgctct ccttctacga agatctcttt 841 aacagtacct accggcaaaa gaagatcgat ttggtggccc tgccagattt cacctttaag 901 tcgaaagaga actggggctt gccagccttt gcggaggaat cccttttgta cgatagccaa 961 cggagttcca ttgacgatca acagggcgtg gcacgagcgg tggccatgat ggtggtgaac 1021 cagtggttcg gaaatctagt ctccgtcgcc tggtggcatg agatctggct gaagaacgtg 1081 tttgcactgt atctctcgcg ttttggtgtg cactcactgc gtccggagtg ggattaccag 1141 gagcggcacg ccctgcagct ctacctctcg gtcctggact acgatgccca tgttaacacg 1201 gatctggtga cggcatcggt gcccgatgag agccacattt gggcggcgta caatgagatt 1261 ggggagcgca aggcagccgt gctcttcgag atgctacacc gcgtcatggg cgaagaggcg 1321 tggctgacgg cactgcgtcg ctatctggtt gtctatgcca atcgcaccgc cacatcctcc 1381 gacttttggg atctcttgca actgcaggtg gaccgtaatg gacgcttggg caagggtctg 1441 aacatcacta ggatcatgaa atgctggcta gggcaaccgg gatatcccct ggtcaccgtc 1501 acccggaact acgaccatcg cacggctatc gtaagtcaac agcgtttctt cataactccg 1561 cagtttcgaa atcgctgggc caggaatccg tgctggtggg ttccgctcag ctatacgtgc 1621 cccagttgcc aacattcgga aatcatctcc tttagccggt ggctcacctg tccgacctct 1681 aagccttcga gtaaatctaa tactgttcta ctggaaaaac tggaggcgga gcctacggac 1741 tggatactgt tcaatgtcca acatacggct ccattccgcg tgaactatga cctccgcaac 1801 tggcagctgc tcaacaaaac gcttgctgat cccaataagt ttcgtctcat ccatcgtgta 1861 aaccgcgccc agttggtcga cgatctcttc agcctcgcct ggagtggcga tatcgaatat 1921 gacatggccc tgggcattct cggctatctg gagcacgagg atgaattcgt tgtctgggta 1981 gcaaccgaga taagcttcga gcgtatcaac aacgtagcga agagcaaccc aaactacctg 2041 atttttaaga cctatatgcg tctcctgctg gagcgccagt tcaagcgggt gatatcctcg 2101 gacttgacca gttcctcggg caacatgacc catcgacccg ttatcattag gctggcctgc 2161 gagtacgagc tgcccgcctg tgtgagtctc gcccgtcggg aattcatgaa gggaacgccg 2221 gagaagggcg gatggatgac catccgagag cgggaaacgg tcgtctgcac ggcagtcaag 2281 ttcggcacgg aaggggaccg ggatatggtc gagtcgatgt acaagcgctc gaattttgcc 2341 gctgaaaagg aatcactgct gaccgccttg gcctgctcgc ggaatgtctt cgccctgcag 2401 agagtcctta tatggacttt tgagagctcg ggagtgcgta agcaaaacgc caggcgaaca 2461 ttcaaggctg tggtctccaa ctccatgggc tatcgattgg ccaagaagta cgtgtccgtc 2521 aatatgcaga acatacgcaa ttattgcagc aactcaaccg acaaggttgt aaatctgatg 2581 acaccgctaa ttgaatgtct gtccactccg aaggaactgc tctactttag taagttcttc 2641 aaggagatcc tacgcgacat gaacggcagt gagcggctca tcaagatcct gctggaacgg 2701 ggcaacgata acatccactg gcagcgcacc aagtttcgcc ccatgttgca ggccattcgg 2761 gacataatcc tgtggcggag tcgggcgaag cggatactca aataa