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LOCUS NM_132415 2914 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132415 VERSION NM_132415.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2914) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2914) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2914) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2914) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2914) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2914) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2914) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2914) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2914) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2914) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2914) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2914) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2914) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2914) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2914) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2914) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2914) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2914) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2914) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2914) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2914) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2914) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2914) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 31, 2011 this sequence version replaced NM_132415.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2914 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2914 /gene="CG9806" /locus_tag="Dmel_CG9806" /gene_synonym="Dmel\CG9806" /map="9D4-9D4" /db_xref="FLYBASE:FBgn0030222" /db_xref="GeneID:31994" CDS 3..2738 /gene="CG9806" /locus_tag="Dmel_CG9806" /gene_synonym="Dmel\CG9806" /note="CG9806 gene product from transcript CG9806-RA; CG9806-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572643.1" /db_xref="FLYBASE:FBpp0071435" /db_xref="GeneID:31994" /db_xref="FLYBASE:FBgn0030222" /translation="MIKLPWYLIVLHLCLPIGGTGATASNLRPLHYNLSLLTEVEPLK LSGNFSGEVIIRLRVWRETRTIILSNNGLQVGENVLLVRRNTGGRVTVRKMWQASSVH QLGIVFNSMLWLGEEYTLVVQFSGQLSRASGYFVGGYMDSKHHPQWIAVTQLAPNLAN TVFPCFENRTFLAPFILNLAHPRGTNAVSNMRVLKTSDHEKDDYVWTTFQQTPAMSVQ KLAFSINRFTNRTSAEIPKGPALTTWLRPKIADQGDYAISITPQIIVFFISLFGKPYP AMKIDQLVLPDTAYQSHEHLGLVSYPEAAFLYSAQRSTTRAKQQVASHVAQEFAHHWL SDLENAALYWLHNGLSDYVSGFAVDNVEPAWRFHELSMVRQALAVLVEDSKSSAYPMS LAYASKSSDTQANQKSALLFRMLHSLIGTQAFLNALRLYLQRSHKGSSSNQAFLWHTL QEESDNQMSLRQDIKVSQLMDSWTMQPGYPLIRVVRNYDTNEVTVTQERFLRNPGKLM QKRQQCWWVPLTFATAGIDSFVSTLPSEWLTCQGRQTASPLILNEVAQPDKWVVFNLR LATPCRITYDERNWQLIGNALSGTNASSIDRFTRAQLISDVLNLAGAGVVTYDLALNF LGHLRNEDEFIVWQAADTYLEWLHRTLRQTTIISTFKGFMRDLLQTKFDELFKRDGSA AENANITELMVIVLQLSCRTDLESCADFALKEFAGLTLETNRIPVDLSETIYCTAIQF GTEADWTLLRRLYTRSNVSEERRILLSAMACSRENWALDKLLNLAFAGRYMPKDDVLL IFSAVAQNPLGYNIAKKYLVDNIKAIIKLYGSNTDELAQLVTVLMKEVTTEEELNALR MFMRTDLQNLPGFEIAFRRILELGEDNISWHNRQYHNLLAAVCNITGSIEPQCIY" misc_feature 90..1424 /gene="CG9806" /locus_tag="Dmel_CG9806" /gene_synonym="Dmel\CG9806" /note="Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); Region: M1_APN-Q_like; cd09601" /db_xref="CDD:341064" misc_feature order(459..461,465..467,873..884,981..986,993..995, 1041..1043,1053..1055,1215..1217) /gene="CG9806" /locus_tag="Dmel_CG9806" /gene_synonym="Dmel\CG9806" /note="active site" /db_xref="CDD:341064" misc_feature 1680..2636 /gene="CG9806" /locus_tag="Dmel_CG9806" /gene_synonym="Dmel\CG9806" /note="ERAP1-like C-terminal domain; Region: ERAP1_C; pfam11838" /db_xref="CDD:463368" ORIGIN 1 aaatgataaa gctgccctgg tacttgattg ttttgcacct atgcctgcct ataggtggta 61 ctggggcaac tgcgtctaac cttcgtcctc tgcactacaa tctcagtctg ctgaccgagg 121 tggaaccatt gaaactgagt ggaaacttca gcggcgaggt tatcatccgg ctgcgcgtgt 181 ggcgagaaac tcgcacgatt atcctcagta ataatggcct acaagtgggg gaaaacgtgt 241 tgctagtccg gaggaacacc ggtggtcggg tgacggtgcg caaaatgtgg caagctagca 301 gcgtccacca acttggcatc gtgttcaata gtatgctctg gctgggcgag gagtatacgc 361 tggttgtcca gtttagtggc cagttgtccc gcgccagtgg ctactttgtg ggcggctaca 421 tggattccaa acatcatccg cagtggatag cggtcacgca actggctcct aatctggcca 481 acacagtctt tccctgtttc gagaatcgca cgttcctcgc tcccttcatt cttaatttgg 541 cgcatcccag gggtaccaat gccgtgagca acatgcgagt actcaagacc tccgaccatg 601 aaaaggatga ctacgtatgg actacctttc agcagacccc agcgatgtca gtacagaaat 661 tggccttctc catcaaccgg ttcaccaatc gaacgtccgc ggagattcct aaaggccccg 721 cgctgaccac ctggctgcga ccgaagatcg cggatcaggg agactacgcc attagcataa 781 caccgcagat tattgtcttc tttattagcc tctttggaaa gccgtatcct gcgatgaaga 841 ttgatcaact ggttctgccc gacacggcct atcagagtca cgagcattta ggattggtga 901 gctacccgga ggcagcattc ctctacagcg cgcagcgctc gacgactagg gccaagcagc 961 aggtggccag tcacgtggcc caagagttcg cccaccactg gctctccgac ttggagaatg 1021 ccgcccttta ctggctgcac aatggcctat ccgactatgt gtccggattt gccgtggaca 1081 atgtggagcc cgcctggcgg ttccatgagc tatccatggt gcgacaggca ttggctgtac 1141 tagttgagga ctccaagagc agtgcttatc ccatgagtct tgcttacgcc tcgaagtcct 1201 cagataccca ggcgaatcag aagtcagccc ttctattccg catgctgcac tccctcattg 1261 ggacccaggc ctttttaaac gcgttgcgcc tgtacctgca gcgctcgcac aagggatcct 1321 cctccaatca ggcattcctg tggcacacat tgcaggagga atcggacaac cagatgagct 1381 tgcgtcagga catcaaagtg agccagctga tggactcgtg gacaatgcaa ccgggttatc 1441 cgctcattcg tgtggtgcgc aactatgata ccaacgaggt gaccgtaacc caagagcgct 1501 ttctgcgcaa tccaggcaag cttatgcaga aacgccaaca atgctggtgg gtgccactga 1561 ccttcgcaac agccggcatc gatagctttg tatcgacgct gcccagcgaa tggctgacct 1621 gccagggcag acagaccgcc agtccgctta tccttaacga ggtggcccaa ccagacaagt 1681 gggtggtctt caatctccga ctggccacgc cctgtcgcat tacctatgac gagcgcaact 1741 ggcagctgat tggaaatgct ctttccggca caaatgccag cagcattgac cgctttacac 1801 gggcgcagct gatcagcgat gtcctcaacc tggccggtgc cggggttgtc acctacgatc 1861 tggccctgaa ctttctcgga cacctgcgaa acgaggacga gttcatcgtg tggcaggcgg 1921 cggacacgta tctggagtgg ctccatcgca ccctgcggca aaccaccata atctctacat 1981 tcaagggctt tatgagagac ctactgcaga ccaagtttga tgagctcttt aagagagatg 2041 gctccgcagc tgaaaatgca aacattaccg aactgatggt gatcgtcctg cagttgtcct 2101 gccgaactga tctggaatcc tgtgcggact tcgcactcaa ggaattcgct ggcctcaccc 2161 tggagaccaa tcgcattccg gtggatctaa gcgaaaccat ctattgcaca gccatacagt 2221 ttggaacgga agctgattgg acgctgctga gaagactcta cacgcggtca aatgtgagcg 2281 aagagcgacg gatccttctg agtgccatgg cctgcagtcg agaaaactgg gcgctggaca 2341 agctgctcaa cctggcattt gccggtcgat atatgcccaa ggatgatgtc ctgctgatct 2401 tcagtgccgt ggcgcagaat cctttgggct acaacatagc caagaaatac ctggtggaca 2461 acatcaaggc aatcattaaa ttatatggaa gcaataccga tgaactggca cagctagtta 2521 ccgttcttat gaaagaggtc accacggaag aagagctaaa cgctttacga atgtttatga 2581 gaaccgatct tcagaacctt ccgggctttg aaatagcctt tcgtcgaatc ctggaactgg 2641 gcgaagacaa catatcatgg cataaccgac aataccataa tctgctggcc gccgtttgca 2701 atataaccgg gtccatagag ccgcagtgca tctactagaa agaccacaaa tttcgactcc 2761 gatttgtaaa aaattagaat ttccaacttt gaatactggt cgatagggaa tttcgttacg 2821 aattcaacga ggtatcccat tccacatttg ggcgattatt tttattctta ttaagaaaat 2881 acttattatt ttttaccaaa aaattaaatt tccc