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LOCUS NM_132410 2782 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132410 VERSION NM_132410.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2782) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2782) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2782) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2782) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2782) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2782) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2782) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2782) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2782) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2782) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2782) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2782) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2782) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2782) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2782) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2782) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2782) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2782) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2782) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2782) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2782) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2782) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2782) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_132410.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2782 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2782 /gene="CG2124" /locus_tag="Dmel_CG2124" /gene_synonym="Dmel\CG2124" /map="9D3-9D4" /db_xref="FLYBASE:FBgn0030217" /db_xref="GeneID:31989" CDS 129..2018 /gene="CG2124" /locus_tag="Dmel_CG2124" /gene_synonym="Dmel\CG2124" /note="CG2124 gene product from transcript CG2124-RA; CG2124-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572638.1" /db_xref="FLYBASE:FBpp0071420" /db_xref="GeneID:31989" /db_xref="FLYBASE:FBgn0030217" /translation="MWARTNYLWRSVGRLRRQVCTTIVSPARIFADRENQFAHGILMD SLKPYAILRPRDSAWQDLPASEGFMRPQPDASAADLYADFLGLVRHCNRMELKISDSR YEAFTRCFCEQLHRLTDEQLLGSLSALAELPVPESPKAKNYMEIWNTLDIECCRRIER WSSEQLLLVSDAWYRLGLVRIGEYVWLALKKLGRKLRKLPPEQLVHSMFLCNLLRRPV FEMFDFELNLARCVDQMTLSELGVMAMGFFKTQTPIRNPELLTQLYQRLGSELDTVED IVLVALLKVLRYSSKLPQVEPLKKMLSALESQVDRVSLLTCLHMALLGCELQTCNDAL VERILLRFERELETARLKDMERICLVMALFNITTKSGVERRLAERLPDLLRQRIEEIL RHPRCFSNCLQFLTMRGVYDLELLGVALEPRFLKHAYPSGLPGREYFHLDGFARLLGP EYQGALVTEKQRQQMGRNYTQYIPDRDGRFKLNNTDRILVEIRDAITMIHRPVTFKHI LPQYDRCDVVLCYDRRQRKALSINGEACQDYSGEILTRKHLLGERKAADDQLVTVVIV IAGWNNVIRDKDRFTGQMDMKLRQLRQLGHQPLVIYWHEWRELENSADRQDFLKRRLS QIAKI" misc_feature 411..>881 /gene="CG2124" /locus_tag="Dmel_CG2124" /gene_synonym="Dmel\CG2124" /note="RNA-editing substrate-binding complex subunit 6 (RESC6) and related proteins; Region: RESC6-like; cl46254" /db_xref="CDD:480594" misc_feature 1821..1994 /gene="CG2124" /locus_tag="Dmel_CG2124" /gene_synonym="Dmel\CG2124" /note="This domain is found in various eukaryotic species, particularly in apicomplexans; Region: RAP; smart00952" /db_xref="CDD:214932" ORIGIN 1 gttctggcaa cgctgcttac cagtcagctg tttagccggc aggtttttca acgaatgttt 61 tcataacgcg ttttccattc aaattcaatt gaattgaatt aatttacaac caaatatcgc 121 tctaaaacat gtgggcaaga acaaactacc tctggcgaag tgtgggacgt ctgcgccgcc 181 aagtatgcac gacgatcgtt tcaccagcgc gaatatttgc ggaccgagag aatcagttcg 241 cccatggaat cctgatggat tctctcaaac cgtatgcaat actgcgtcct cgggactccg 301 cctggcagga tttgcccgca tctgaaggct ttatgcggcc acagccagat gccagtgctg 361 ccgatctcta tgcggacttt ttaggcctgg tgaggcactg taatcgcatg gaactgaaga 421 tcagcgatag ccgctacgaa gcctttaccc gctgcttctg tgagcagctg catcgcctta 481 cggatgaaca acttcttgga tcgcttagtg ccttggccga gctgcccgta ccggaatcgc 541 ccaaagccaa gaactacatg gagatatgga ataccctgga catcgagtgc tgtcgccgca 601 tcgagcgatg gtccagtgaa caattgctac tcgtgagcga tgcctggtat cgtcttggtc 661 tggtcaggat aggcgagtac gtgtggctgg cgctgaaaaa gctcggccgc aagctgcgaa 721 agctgccgcc agaacagctc gttcactcca tgttcctgtg caatctactg cgccgacccg 781 tcttcgagat gttcgatttc gagttgaatc tggcccgctg cgtggatcaa atgacgctgt 841 ccgaattggg cgtaatggcc atgggcttct ttaagacaca gacgcctatc agaaatccgg 901 agctgctaac gcaactctat cagcgattag gcagcgagct ggacaccgtg gaagacattg 961 tcctggtagc gctgctcaag gtgctgcggt acagcagcaa gctgccacaa gtggagccgc 1021 taaagaagat gttaagcgct ctagagtcgc aagtggatcg cgtttccctc ctcacgtgcc 1081 tgcacatggc tcttctgggc tgtgaactgc aaacgtgcaa tgatgcactg gtggagcgca 1141 tactgctgag attcgagcgt gagttagaga ctgcccgcct caaggatatg gagcgaattt 1201 gtctggtaat ggcccttttc aatattacaa ctaagtcggg agtggaacgc cggttggcgg 1261 agagattgcc cgatttgctg cgccagcgta tagaggagat actgcgccat cctcgttgtt 1321 tctccaactg ccttcagttt ctcacaatgc gtggtgttta cgatcttgag cttttgggcg 1381 tggcactgga gccgcgtttc ctgaagcatg cgtacccaag cggattgccc gggcgtgagt 1441 acttccattt ggatgggttc gcacgcctcc tggggccgga ataccaggga gcactggtta 1501 ccgagaagca acgacagcag atgggccgca attacacgca gtacatcccc gatcgggacg 1561 gacgcttcaa gctgaataat accgatcgta ttctagtgga aatacgggat gcgatcacca 1621 tgatccaccg tcccgtgacc ttcaagcaca tcctgccgca atacgatcga tgcgatgtag 1681 tgttgtgcta cgaccgccgg caacggaagg cgttgtccat aaatggtgag gcctgtcagg 1741 attacagcgg tgagattctc acccggaagc acttactggg tgagagaaag gctgcggatg 1801 accagctggt cacagtggtt atcgttattg ccggctggaa caacgtaatc cgcgataagg 1861 atcgtttcac cggccaaatg gatatgaagc taaggcagct gcggcaattg ggacatcagc 1921 cactggtgat ctattggcac gagtggcggg aactggagaa ctcagctgac cgccaggact 1981 ttctgaaacg ccgccttagc caaattgcaa aaatttagca ggaaataaaa acggcaatag 2041 aattgatatt agtcagtcat tagcattatc tgaacattgt acaggcacaa cactacgatc 2101 tattaattat ctagaaaaaa aagcaataat tatcgaatat ttaataatga ccgcccgcgg 2161 ccgacaacta ctagcacagc gtcttgctcc cggatccccg caatcggacc gcagcggacc 2221 gttcgtcgcg atccattgta tggttgatgc cgtcgtcaga gggtggcgct caacgctcgc 2281 ttggtgtact cgtagaccac gaacagggtg gccgtggctg gaatggtgcg caggacagat 2341 ggcagcaggc cgcgatagag tgccaggaca ccttcgcgac ggactatgtc cgctcccacg 2401 gcgaacatgc tttcgttgag gttcttcacc tgtatgcgac tcttaattac gtctgcagga 2461 aacgtcgacg tccagaggca gacgcctcca atggcgccgg cgatcatcgt acgcagtggt 2521 ccaatatcat ctttggattg atcatccctg caaaggaaaa taagaattat gccaatgtaa 2581 ataactattt aactttgtcc aacatctttc atttgaatag actaacgaag atcgagttat 2641 ctgtccagct aaggattttg ttaagatatt gttgaacaaa ttctgtaaat gactaaatat 2701 aactatactg ctaattagta tgataactga agaagaacga ttgttgttca ctcgtaaaca 2761 ttaaactcat taatctcctt ct