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LOCUS NM_132349 2443 bp mRNA linear INV 26-DEC-2023 A (CG3106), mRNA. ACCESSION NM_132349 VERSION NM_132349.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2443) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2443) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2443) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2443) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2443) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2443) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2443) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2443) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2443) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2443) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2443) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2443) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2443) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2443) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2443) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2443) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2443) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2443) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2443) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2443) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2443) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2443) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2443) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_132349.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2443 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2443 /gene="CG3106" /locus_tag="Dmel_CG3106" /gene_synonym="Dmel\CG3106" /map="8F6-8F6" /db_xref="FLYBASE:FBgn0030148" /db_xref="GeneID:31909" CDS 108..2336 /gene="CG3106" /locus_tag="Dmel_CG3106" /gene_synonym="Dmel\CG3106" /EC_number="2.3.1.-" /note="CG3106 gene product from transcript CG3106-RA; CG3106-PA" /codon_start=1 /product="uncharacterized protein, isoform A" /protein_id="NP_572577.1" /db_xref="FLYBASE:FBpp0071338" /db_xref="GeneID:31909" /db_xref="FLYBASE:FBgn0030148" /translation="MMEHFGVLAVVLLIATAVGAQDTSSNYLLTGHSTPLASSFAHQF FTLASQSAELANRTNTQVIQTYEDRNYDDELCDRDINLIRDSINNLEEWALEFPDTWG RLPMGLFWGHTISMGQYEECVAASSTHTTEIRGQYCLASLNITTFYQSVKKRGEEFSR ISYKQTDPEVFELGICVPKTCSAAKTEKLLKYAITHFYGQDVMESNYTMVTEARCKYD APIELRGIDIFAIIFFSLIIFFMVASSVYDYIQTRKGAPKKPLLIAFSVLTNAPKIFT VKKVNNPNVIHCLNGLRCFSMMWVVFGHGYMTFYDLPHINKNKFYTWVQTPYSMLVQN GSLCVDTFFFMSGLLMCWGAFREMERTKGKLNIPMMYFHRYIRLTPVVAVVVLYIMSL YKYSGAGPMWFKLGTQDKRCADTWWATLIYVQNYAFPYSICISQSWYLAVDTQLYFLS PLFLIPLWKWGKKALVPIVIVLILCLGGTFATFMLNDFTLFRVQDDQVDLRQRLTYYP THTRIPTWLIGVIFGYFLFTRNRGRQIPMSKPLVLTGWFVAFGTMLACMWGPYWRILP DTPDSPLIEGAFFEPLSRTSWALSIGWIVWACYNGHGGLVNDFLSWGFFTGFSRLCYC MYVIHRIVQLVNAARLQTDTHFSNYDAILRWWHDFGITLTASIFATLAFEAPILGIEK AIFGKPAPKKPSPGELAKAAPVAATSASAEPEPEAKPESVVETKTEIAPVPTNEENPS KA" misc_feature 378..758 /gene="CG3106" /locus_tag="Dmel_CG3106" /gene_synonym="Dmel\CG3106" /note="N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to nordihydroguaiaretic acid-4); Region: NRF; smart00703" /db_xref="CDD:214781" misc_feature 963..2177 /gene="CG3106" /locus_tag="Dmel_CG3106" /gene_synonym="Dmel\CG3106" /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]; Region: OafA; COG1835" /db_xref="CDD:441440" ORIGIN 1 ccactcagta acacgaacca ccctcaggtg gccgcggcgc gcactccaga tccctaatcc 61 cagatcacta atcactatac ccaccgacaa tccacgcaaa aggatttatg atggagcatt 121 tcggtgtcct ggccgtcgtg ctgctgatcg cgactgctgt cggtgcccag gatacttcgt 181 ccaactatct gctcaccggt cactcaactc cgctggccag cagctttgcc caccagttct 241 ttaccttggc ctcgcaaagc gctgagctcg ccaataggac gaacacccag gtgattcaaa 301 cctacgagga tcgcaactac gacgatgagc tctgcgatcg ggatatcaac ctaatcaggg 361 attcaatcaa caacttggag gagtgggcac tggaatttcc cgacacatgg ggtcgtttgc 421 ccatgggtct cttctgggga cacaccatca gcatgggtca gtacgaggag tgcgtagcag 481 ctagctctac ccacaccaca gagattcgtg gacagtattg cttggctagt ttgaacataa 541 ctacgtttta tcaatcggtt aagaaacgcg gcgaagagtt ctcacgtatt agctataagc 601 aaacagatcc ggaagtcttt gagcttggca tttgtgttcc aaagacatgc agtgctgcaa 661 agaccgaaaa attgctcaag tacgctatca cccactttta tggacaggat gtgatggaat 721 caaactacac aatggtgacg gaagcgcgct gcaaatacga tgcacccatc gagctgcgcg 781 gcattgacat attcgcaatc attttcttct cgctgatcat cttcttcatg gttgccagca 841 gtgtctacga ttatattcag acccgcaaag gagcccccaa aaagccactg ctgatcgcgt 901 tttctgtact gacaaatgcc cccaaaattt tcaccgttaa gaaggtgaac aatcccaatg 961 tgattcactg cctaaatgga ttgcgttgct ttagtatgat gtgggtggta tttggccacg 1021 gctatatgac cttctacgat ctgccacaca tcaacaaaaa caaattctac acctgggtgc 1081 agacccccta ttcgatgttg gtccagaacg gctcgctttg cgtggacacg ttcttcttca 1141 tgtccggtct gctgatgtgc tggggtgcct tccgtgaaat ggagcgcacc aagggcaagc 1201 taaacatccc gatgatgtat ttccatcgct acattcgact tacgccagtg gtggccgtcg 1261 tcgttctgta cattatgtca ctgtataagt actcgggcgc cggacccatg tggttcaagc 1321 tgggcaccca ggataagagg tgtgccgaca cctggtgggc aacgctgatc tacgtccaga 1381 actatgcctt cccctacagc atttgcatat ctcaatcgtg gtatttggcc gtggacaccc 1441 agctgtactt cctttcgccg ctgttcctca ttccgctgtg gaaatgggga aagaaggcct 1501 tggtgcccat cgtgatcgta ctgatcttgt gcttgggtgg aactttcgcc acctttatgt 1561 tgaatgactt tacgcttttc cgcgtgcagg acgatcaagt ggatctgcga cagcggttga 1621 cctactatcc aacgcacact cgaattccca cttggttgat tggcgtgatc tttggctact 1681 tcctgtttac ccgtaaccgt ggacgccaga ttccgatgtc caagccactg gtgctgaccg 1741 gttggttcgt ggccttcgga acgatgttgg cctgcatgtg gggaccatac tggcgcatcc 1801 tgccggatac tcccgactcg cccctgatcg aaggcgcatt ctttgagccc ctgagcagaa 1861 cgtcgtgggc tctgtccatt ggttggatcg tttgggcctg ctacaatggt cacggcggtc 1921 tggtcaatga cttcttgtcc tggggattct tcacgggctt cagccgactg tgttactgta 1981 tgtacgtcat tcatcgcatt gtccagctgg tcaacgccgc tcgtctgcag acagataccc 2041 acttctccaa ctacgatgcg atcctccgct ggtggcatga ctttggcatc accctcaccg 2101 cctcgatctt cgccaccttg gccttcgagg cacccatttt gggcatcgag aaggccatat 2161 tcggcaagcc ggcgcccaag aagccatctc ccggagagct ggccaaggct gccccggtgg 2221 cagccacttc tgcttccgct gaaccggaac cggaagccaa acccgagtcc gttgtggaga 2281 ccaagacgga aatagcgccc gttcccacca acgaagagaa tccatccaag gcctagactc 2341 tgcagcctta gcacgatttt tttttcacca tgcgaaccaa ttttttgtgt gtagttagtt 2401 taatttatta aacattttaa acaataaaac gattcatgta ttt