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LOCUS NM_132321 2397 bp mRNA linear INV 26-DEC-2023 A (CG17754), mRNA. ACCESSION NM_132321 VERSION NM_132321.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2397) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2397) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2397) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2397) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2397) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2397) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2397) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2397) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2397) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2397) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2397) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2397) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2397) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2397) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2397) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2397) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2397) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2397) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2397) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2397) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2397) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2397) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2397) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_132321.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2397 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2397 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /map="8D3-8D3" /db_xref="FLYBASE:FBgn0030114" /db_xref="GeneID:31873" CDS 351..2315 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="CG17754 gene product from transcript CG17754-RA; CG17754-PA" /codon_start=1 /product="uncharacterized protein, isoform A" /protein_id="NP_572549.2" /db_xref="FLYBASE:FBpp0071251" /db_xref="GeneID:31873" /db_xref="FLYBASE:FBgn0030114" /translation="MSAVNQKESPSRDSTASTSGHISMLADNTLESLSRDYSLGSLNS AGSQDEFFRCRDHADNILKRMQLYVDSQQLCDVVLIAGIDGKRVPAHRLVLSASSAYF SAMFTGSLRETKEQEVTLGEVHGDALHLLVQYCYTGFIEMREDTVETLLATACLLQLN AVVTACCNFLARQLHPSNCLGFAFFAEQQSCTTLLRLAQAYTCQYFMQVCQNQEFFQL NADQLGKLLSSDDLNVPSEQDVFHSLMSWVRHDSAAREQHIPELLALVRLPLLQPAFI MDHVENVCNANECQQLVMEAFKWHLMPERRSRIATERTTPRKSTVGRLLAVGGMDAHK GAISIESYCPRLDKWTPWKHMTGRRLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLN TMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMS SMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVA NGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLI VVGGYDGNHALKSVEEYDPVRNGWNELAPMAFARAGACVVAIPNVIPPAAQQPPPSAT KKKKWKPVRLDPICYNRRPRCVEFVDYYNM" misc_feature 561..2123 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="kelch-like protein; Provisional; Region: PHA03098" /db_xref="CDD:222983" misc_feature 1425..1556 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="KELCH repeat [structural motif]; Region: KELCH repeat" /db_xref="CDD:276965" misc_feature 1566..1697 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="KELCH repeat [structural motif]; Region: KELCH repeat" /db_xref="CDD:276965" misc_feature 1707..1841 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="KELCH repeat [structural motif]; Region: KELCH repeat" /db_xref="CDD:276965" misc_feature 1848..1997 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="KELCH repeat [structural motif]; Region: KELCH repeat" /db_xref="CDD:276965" misc_feature 2007..2138 /gene="CG17754" /locus_tag="Dmel_CG17754" /gene_synonym="BcDNA:LP02641; Dmel\CG17754" /note="KELCH repeat [structural motif]; Region: KELCH repeat" /db_xref="CDD:276965" ORIGIN 1 acgcatacac gggcgctcgt gcagcttgat acagttacag ttacagatcc agcacgcaat 61 tcgcggccaa ttgaaacgat tcaaagatcg cgagtggaat agatcggagg cgacaccaac 121 acaccaacac aacagcacac agacgtacgc gcactgtggc aagaggcagc gttctttgtt 181 gcaaattacc gttgcatcca cctttcagcg ccaccccctc catcggcctc accgattcgc 241 gatccacgat ccgccttctg ccaaccgccg ccagccagtt gcttccagcc agtgatccga 301 tgcagacgtt tcgctgaaaa ggagcgcaca gccagaacag aagaagaacc atgtcggcgg 361 tgaaccagaa ggagagtccc agccgggact cgacggcctc cacatccggg cacatatcga 421 tgctggctga caacacattg gaatcgctgt cgcgggacta cagcctgggc agcttgaact 481 cggcgggcag ccaggatgag ttctttcgct gccgagacca tgcggacaat atactcaaac 541 ggatgcagct ctacgtggat agccagcagc tgtgcgatgt ggtcctaatc gctggcatcg 601 atggaaagag ggtgcccgcc caccgcctgg tgctatcggc gtcgagcgcc tacttctcgg 661 ccatgttcac gggatcgctg cgcgagacca aggaacagga ggtgaccctc ggtgaagtgc 721 acggcgatgc actgcatctg ctggtccagt actgctacac cgggttcatt gagatgcgcg 781 aggacaccgt ggagacgctg ctggccaccg cctgtctgct gcagctgaat gccgtggtga 841 ccgcctgctg caacttcctg gcccgccagc tccatccatc caactgcctt gggttcgcct 901 tctttgcgga gcaacagagc tgcaccacgc tgctgcgtct ggcgcaggcc tacacctgcc 961 agtactttat gcaggtgtgc cagaatcagg agttcttcca gctgaacgcc gatcagttgg 1021 gcaagctgct tagcagcgat gatctcaatg tgccctcgga gcaggatgtc tttcacagtc 1081 tgatgtcgtg ggtgcgccac gattccgctg cccgtgagca gcacataccg gagctgttgg 1141 ccctggtgcg actgccccta ctgcagccag cgtttatcat ggaccacgtg gagaacgttt 1201 gcaatgccaa cgagtgccag cagctggtta tggaggcatt caagtggcac ctgatgcccg 1261 agcgccgatc ccggatagcc accgagcgaa caacgccgcg caaatccacg gtgggtcgtc 1321 tcctggccgt cggcggcatg gatgcccaca agggcgccat cagcatcgag agctactgcc 1381 cgcgtttgga caagtggaca ccgtggaagc acatgaccgg tcgtcgactg caattcggcg 1441 ctgctgtcat ggaggataaa ctgatcctag tgggcggacg tgatgggcta aagaccctga 1501 acaccgtaga gagtttggac ctgaatacaa tggcctgggc accgctcaat gccatggcca 1561 caccccgtca tggactgggc gtggcggtgc tggagggtcc actctatgcg gtgggcggtc 1621 acgacggctg gagctacctg aacaccgtgg agagatggga tcccatagcg cgcacttgga 1681 gctatgtggc acccatgtcc tcgatgcgtt ccaccgccgg cgtggctgtc ctgggcggtc 1741 gcctgtatgc ggtgggcgga cgtgatggtt ccgtctgtca tcgctccatc gagtgctacg 1801 atccgcacac gaacaaatgg agcctactgg cgccgatgaa caggagacgc ggcggcgttg 1861 gcgtgacggt ggccaatggt ttcctgtacg ccttgggtgg ccacgactgt ccggccagca 1921 atccaatggt ctgccgcacg gagacggtgg agcgctacga cccagccacc gatacctgga 1981 ctctgatctg ctcactggct ttgggccggg acgcgatcgg ctgtgccctg ctgggcgatc 2041 gcctgatcgt cgtcggcggc tacgatggca atcatgcgct gaagagcgtc gaggagtacg 2101 acccggtgcg caatggatgg aacgagctgg cgcccatggc tttcgcaagg gccggcgcct 2161 gtgtggtggc gattccgaat gtcataccgc cggcggctca acagccgccg cccagtgcta 2221 caaaaaagaa gaagtggaag ccagtgagat tggatccaat ctgctataat aggcgtccca 2281 gatgtgtcga gtttgtcgac tactataaca tgtaaatgct agacagacaa gacaacaaac 2341 aaagcaaact ataaacattt aagccaagct aaaagaaaaa acacaagaaa acttgtc