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LOCUS NM_132317 2954 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132317 VERSION NM_132317.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2954) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2954) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2954) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2954) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2954) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2954) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2954) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2954) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2954) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2954) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2954) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2954) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2954) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2954) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2954) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2954) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2954) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2954) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2954) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2954) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2954) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2954) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2954) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_132317.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2954 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2954 /gene="CG12121" /locus_tag="Dmel_CG12121" /gene_synonym="Dmel\CG12121" /map="8D2-8D2" /db_xref="FLYBASE:FBgn0030109" /db_xref="GeneID:31866" CDS 266..2482 /gene="CG12121" /locus_tag="Dmel_CG12121" /gene_synonym="Dmel\CG12121" /note="CG12121 gene product from transcript CG12121-RA; CG12121-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572545.1" /db_xref="FLYBASE:FBpp0071269" /db_xref="GeneID:31866" /db_xref="FLYBASE:FBgn0030109" /translation="MWAPGGDVKSIVVLAALTALLWAPLEVLGRKHHLEVRNDRRQYI ALSTFGFYTNGHLDVQLSKLTFDNEQSTDLMGLSLDKTTIDQLNPYLDSHQNKCILEE SPKSQISGPILFFVLDLKELKVRVKCSPEWHNMHIYNQIPSRTKRHSHMAKVSDSVLF RQTRAAQDFSAEGPDESMEDPLEQEPTDLKSSSPAAVAGKIELPKDEGAPKVDAPAQN VDAVKEESVPKPEVAANQNISDKQELPPPPNAAPKVEEAVKSEQKQEEAPAEKDETPS KKEETPAKQVSVEEPKVAAPPLAVNSPAAAPSLDDTEVDKKNEATDTDAAPGNPFPHE GDSEEDSYGPDSFKQSQENLCKDSTMPLVRETINNVHYYSFNFSMMVATPSDEGLYNL YFHACPNYHTSKIMSFNVDIEENNNGNYLSAGEMPLPALYFMMSLLFFLSGLFWVFIL KKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHFIEKRGEHVETWAILYYIAHLLKGA VLFITIVLIGTGWTFIKHILSDKDKKIFMIVIPLQVLANVAQIITDESDQSDAEFRTW HNIFFFVDLLCCGAILFPIVWSIRHLHEASATDGKAAINLRKLKLFRQFYIMIVCYIY FTRIIVDLLQMTVVFQYAWLDEMFREMATYVFFVLTGYKFRPVSSHPYFTVPDEDEDD DEVEVLTESGLTETVHRVKQLNRNHGSGLGGITIIEGNDDERENLIAKRESSHEYD" misc_feature <800..1300 /gene="CG12121" /locus_tag="Dmel_CG12121" /gene_synonym="Dmel\CG12121" /note="Prolipoprotein diacylglyceryl transferase; Region: LGT; cl00478" /db_xref="CDD:469786" misc_feature 1424..2278 /gene="CG12121" /locus_tag="Dmel_CG12121" /gene_synonym="Dmel\CG12121" /note="Lung seven transmembrane receptor; Region: Lung_7-TM_R; pfam06814" /db_xref="CDD:369089" ORIGIN 1 cacatgctga tatcgaagaa cgatagactt cgatagatca ccttttttcc cccagcaaaa 61 aagtaaaatt ctttggggtt tttatcaagg tgaggtgtga ataataggaa ctgtgacggc 121 ggtcgcggca aatcgattgc cgcatcttgg atcgcagcta gcgcggaact ctgcgccgga 181 acgttccgcc cggaatcgcg gggcaaaagt gccacgaaac gtcgccgaag aatagaagcg 241 gaaaatttgg ggaaaatacg gaaagatgtg ggctcccggc ggggatgtta aatcaatagt 301 ggtgctggcg gcactgacgg cgcttctctg ggccccactt gaggtccttg ggcggaagca 361 ccatctggaa gtgaggaatg accgtcgcca gtacatcgca ctcagcacct ttggattcta 421 cactaatggc catttggatg tgcagctcag caaattgact tttgacaatg agcagtctac 481 agatttgatg ggtctgtcgc tggataagac cactattgac cagcttaatc cctatttgga 541 ctcgcatcaa aacaaatgca ttctcgagga atcacctaaa tcccagatca gcggacccat 601 tctcttcttc gtgctggacc tcaaggagct taaagttcgt gttaagtgct cccccgaatg 661 gcacaatatg cacatctaca accaaatccc gtccagaacc aagcggcact cacacatggc 721 caaggtcagc gattcggttc tgtttcgcca gacccgcgct gcccaagatt tctccgccga 781 ggggccagat gagtccatgg aggatccctt ggagcaagaa ccgacggatt taaagtcttc 841 ctcgcctgct gcggttgcag gcaaaattga gctgcccaaa gatgaaggtg cacccaaggt 901 agatgctcct gcccaaaatg ttgatgctgt caaagaggag tctgttccca agccagaagt 961 ggctgccaat cagaatattt ctgacaagca ggaactgcct cccccaccaa atgccgcccc 1021 taaagtggag gaagccgtta agagtgaaca gaagcaggag gaagcccccg ctgaaaagga 1081 tgaaacccct tcgaaaaagg aggaaacccc agcaaagcaa gtatccgtag aagagccaaa 1141 agtcgcagcc ccaccactgg ccgtaaatag cccagcagct gctccgtccc tagatgatac 1201 tgaagttgac aagaaaaatg aagccaccga tacggacgca gctcccggaa accctttccc 1261 ccacgaaggc gattccgaag aagattcata tggacccgac tcctttaagc aatcgcaaga 1321 aaacctttgc aaggattcga ccatgccgct ggtcagggag accatcaaca atgtacacta 1381 ctacagcttc aacttctcta tgatggtggc cacgcccagt gatgagggct tgtacaacct 1441 ttacttccac gcctgtccca attatcacac ctcaaaaata atgtccttca atgtggacat 1501 cgaggagaac aacaatggca actatttgtc ggctggagaa atgcccctgc cagccttgta 1561 cttcatgatg agcctgctct tctttctctc cggcctcttt tgggttttca ttttgaagaa 1621 gagcaagcac actgtgtaca aaatccatta tttgatggcc gtgctggtgt tcctcaagtc 1681 cctctcgctg atgttccatt cgatcaacta tcacttcatc gaaaagcggg gcgagcatgt 1741 ggagacctgg gccatccttt actacattgc ccacctgctg aagggcgccg tgctcttcat 1801 caccatcgtt ttgattggca ccggctggac ttttattaag cacattctct ctgacaagga 1861 caagaagatt ttcatgatcg taattccact gcaggttctg gccaacgtgg cccagatcat 1921 tacggacgag tctgatcaga gcgacgccga gttccgtacc tggcacaaca tcttcttctt 1981 cgtggatctg ctgtgctgcg gcgccattct ctttccaatc gtatggtcca tccgacatct 2041 acatgaggcc tctgcgacag atggcaaggc ggcgatcaat ttgcgcaagt tgaagctgtt 2101 ccgtcagttc tacatcatga tcgtgtgcta tatctacttc acgcggatca tcgtcgatct 2161 gctgcagatg acggtggtgt tccaatacgc ctggctagac gagatgttcc gtgagatggc 2221 cacatacgtg ttcttcgtgc tgactggcta caagttccgt ccagtatcct cgcatccata 2281 cttcaccgtg ccggacgaag acgaggatga cgacgaggtg gaggtgctta ccgaatctgg 2341 tctcacggag acggtgcacc gtgtgaagca gctaaaccga aaccacggaa gcggcttggg 2401 cggaatcacc atcatcgagg gcaacgatga tgagcgcgag aacctgattg caaagcggga 2461 atcaagccat gagtacgatt aggccccata atggaagcca attgatctgc atcaccaata 2521 ttccctgcat tagtccgtag tctatagtcc ccggagtctt ggatataatg actcaaattc 2581 tgagctagta ctttaccatt actttaatat atttgtttta tgttcagcgc atcttaagag 2641 aaatcaataa gaaaatcaaa agcaaacgcg atggccatgg aggggataat ctcagcatat 2701 aaacttgtat agggcaacgt cggcacaacg tttggtgggc accaactgct cctccaccac 2761 ctcctccagt gcccgtccag tcgccagcca aggaaccctt gtaaataaat aatgaatccg 2821 cttaacggaa tactgaacgc ttgtgacacc caggccctat ccttggttta agatatacat 2881 atacatataa ataaatacac ttatgtaatt acctataatt ttatgaatat aacaaagctt 2941 taatatgtaa accc