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LOCUS NM_132245 3426 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132245 VERSION NM_132245.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3426) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3426) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3426) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3426) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3426) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3426) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3426) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3426) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3426) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3426) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3426) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3426) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3426) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3426) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3426) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3426) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3426) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3426) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3426) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3426) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3426) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3426) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3426) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3426 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3426 /gene="CG1387" /locus_tag="Dmel_CG1387" /gene_synonym="Dmel\CG1387" /map="7E5-7E6" /db_xref="FLYBASE:FBgn0030033" /db_xref="GeneID:31770" CDS 409..3276 /gene="CG1387" /locus_tag="Dmel_CG1387" /gene_synonym="Dmel\CG1387" /note="CG1387 gene product from transcript CG1387-RA; CG1387-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572473.1" /db_xref="FLYBASE:FBpp0071121" /db_xref="GeneID:31770" /db_xref="FLYBASE:FBgn0030033" /translation="MKPDQINRLIKVNTRMQPWFLRNTSELYESAVRSYYERGYSSHN RHPRFRTENAGPLRRIKRAEAKPSANDIYPRSHIMQADQASAASNSNSGQFLYSMMQA NRSRSMSFTAARPYASVYGQSSVRRVASSSCSSGRSSESSRTGFLVGSFRKSKAKRER QSRSMRKSKDSKEESHLVDMGMFSGRSMSMPPRPSAAILGSVAMMPPSRQHHIAAMAK SSLAQGIQMPRSDGDSLMPVDAALKRRISVLTKLDGGRKRSGLGPLGTGNDSTTTRNG QQPSEMRHRFQTLGDRIKQFEYIQFADGPVATYAFNRNEQRPINASIRDSPRSRIEKS SDMSINTTKTNATTRRSEVRQQPRQLSFHNVLHANYRQRSRSLESGGVKLMESLESIA RPATPPGPRGFDVTTRGSSLDSSSRTSFRPSNSTITWDNSLGRYEEDLGKRSVNDFGY AKSSEDTSGDWDVNPGEDWPKYPRSSSPCGKGLMSNVAKSDNASVGNSNASSQNWAIP SGSATKLRSIEGKTKDDTLESTKLNSEHGKANSNSGSTSHDTSQANSEAASVQDESNR ATLAPVRRVHLQQQSLQNSTKVEEPKCEDVPISPHEVKDTVKEKAKENVKKKQLLETL HDKPRVTKVTSNQVSRSSHRSFLQPAKDDDVTAANASKKSHPKLGKKPERKANQKRED RTPGQVKGANQLLVASASQVSAYKRAFRTQQQIRKAEILQQQAQHLQESPISPSAIEG SKQTAKLQSHQGSIQQSISNRTNVRTLVRRSAAGSGGKAPPLDDQLSSKAVCGTHSSL TAKPESNGMVLKTKGLNRSQMKKTAAATATAAPLTAKRTAQHIVLTAKTTTKRGNGAA IFGGGGGRGVGVGGAVRRAGRETLTVAAQQQQSRNGNSLLGYRRETVNRAAAALLQRR DADEPLSQLQLQLQSQSPSASQSTQQRRQFHCPYPPWRPSY" ORIGIN 1 taacacttct ttttactcgg ctttaacgtt gacgttactt gagtttcgtg cgtgtgattt 61 tctttttttt cttttcaaaa tacagacaga catatccatt ttcacgcacc ggcatgtttt 121 agtacaccgc agttagttac gttttcgatt acttttctcc cgttttgccc caagccatta 181 gttttaagag cattaaattg tcaagcaata caaaagtggt ctgagcaaca ggcaaataaa 241 aattcaaaca ttaacttcga ttcagtgcat ttggaaagca aaattgttca agttcaagcc 301 aatagataga agccaaacta gttattatta taggccacaa atacctgtgc catttatcca 361 aattcgaata ttgccaacat tcggacgtag aaattatccg gcgttacgat gaaacccgac 421 cagataaatc gtttgatcaa agtgaatacc cgaatgcaac cctggttttt gcgcaacact 481 agcgagttgt acgaaagtgc cgttagatcc tattacgagc gcggctatag ttcacacaat 541 cgacacccac gtttccgtac tgagaacgct ggtcctttgc gacggatcaa gagggcggag 601 gcgaagccca gtgccaacga tatctatccg cgcagccaca tcatgcaagc ggatcaggca 661 tcggcggcca gcaatagcaa ttccggccaa tttctgtact cgatgatgca ggcgaatcgt 721 tcacgctcca tgtcctttac ggcggctcgt ccttacgcct ccgtttacgg tcaaagttcc 781 gtgcgtaggg tcgccagttc gagctgctcc agcgggcgca gtagcgagtc atcccgcacc 841 ggattcctgg tcggatcctt ccgcaaaagc aaagcgaaac gggagcgcca gagccgatcg 901 atgcgcaaaa gcaaggactc caaagaggag tctcatctgg tcgatatggg catgttcagt 961 ggccgttcca tgagcatgcc accccgtcca tctgcagcca ttttgggatc cgtagcaatg 1021 atgccgccaa gcaggcaaca ccacatagcc gccatggcga agagctcact ggcgcagggc 1081 atccaaatgc cgcgtagcga tggcgactcc ctgatgccag tggatgccgc cctcaagcgt 1141 cgcatttcgg tgctgaccaa gctggacggt ggacgaaagc ggtctggact cggtccacta 1201 ggcactggaa atgacagcac caccaccaga aacggacaac agccgtcgga gatgcgccac 1261 cgctttcaga ctttgggcga tcgcatcaag cagttcgagt acatccaatt cgccgatgga 1321 cccgtggcca catatgcctt caatcggaac gagcagagac caatcaatgc cagtatccgt 1381 gattcgccaa ggagccgaat tgagaagagc tcggatatgt caattaatac caccaaaacc 1441 aatgccacca cgcgacgttc ggaggtgaga caacagccgc gccagcttag ctttcacaat 1501 gtcctgcacg ccaactatcg ccagaggagc cgaagcctgg agtccggagg cgttaagcta 1561 atggaatcgc tggaatccat agcgcgaccc gccactccac ccggtccacg gggcttcgat 1621 gtaaccactc ggggatccag cttggacagc agttcgcgga ctagtttcag gcccagcaac 1681 tcgacaatca cttgggataa ttctttgggt agatatgaag aagacttagg taaaaggtcg 1741 gttaacgatt tcggatatgc aaagagttcg gaagacacat caggcgattg ggatgttaat 1801 ccaggtgaag attggcccaa gtaccccaga tcaagtagcc cgtgcggcaa gggtttgatg 1861 tcaaatgtag caaaatcaga caacgcttcg gtgggtaact caaatgccag tagtcaaaat 1921 tgggcaatcc catcgggatc tgcgacaaaa ttacgctcga ttgagggaaa aaccaaagac 1981 gatactttgg aatcgacgaa attgaattcg gagcatggta aagccaattc caattccggt 2041 tccacttccc acgacacttc gcaagcaaat tcggaagcgg cttcagttca agatgagtcc 2101 aatagagcca ccctggcacc cgtgcgtcgc gtccacctgc agcaacagag tctgcagaac 2161 tcaaccaaag tggaggaacc caagtgcgag gatgtgccaa tcagtcccca cgaggtcaag 2221 gacacggtca aggagaaggc taaggaaaat gtcaagaaga agcagctgct tgagactctg 2281 catgataagc cgcgagtgac caaggtgacc agcaaccagg ttagccgctc cagccatcga 2341 tccttcctgc agccggccaa agatgatgac gtgacggcgg ctaatgcctc caagaaatcg 2401 catccaaagc tcggaaagaa accggaaaga aaggcgaatc agaagcggga ggacaggaca 2461 ccaggccagg tcaagggagc caatcagctg ctggtggcga gtgcctcgca ggtttcggcc 2521 tacaagcgtg ccttccgcac ccagcagcag atacgcaagg cggagatcct ccaacagcag 2581 gcgcagcatc tgcaggagtc cccgataagt ccgtctgcca tcgagggatc gaaacaaacc 2641 gccaagctgc agagccacca gggctcgata caacaatcta tctctaatcg gaccaatgtt 2701 cgaacgttgg tcagacgcag tgcagccggt tcgggtggca aggctccgcc gttggacgat 2761 cagctgtcat ccaaagcggt atgtggaact cattcttcgt tgacagccaa gccggaatct 2821 aatggaatgg ttctgaaaac gaagggatta aatcgatcac agatgaagaa gacagcagct 2881 gctactgcaa cagcagcacc cctaacagcg aagcggactg cgcagcatat agtgttaacg 2941 gcaaaaacaa caacgaaaag gggaaatgga gctgcgattt ttggtggtgg agggggaagg 3001 ggagttggag ttggtggagc tgttcggaga gcgggaaggg aaacgctgac ggtggcagct 3061 cagcagcagc aatcgcgtaa cggtaactcg ctgcttggct atcggcgcga aacggttaac 3121 cgcgcagcgg cagcgctgct gcagcgacgc gacgcagacg agccgctgtc gcagttgcag 3181 ttgcagttgc agtcgcagtc gccgtcggcg tcgcagtcga cgcagcagcg gcgccagttt 3241 cactgtccat atcccccatg gcgtcccagc tactgagtgt tcactgtatc ccgttatgcc 3301 gcccgtgctc acccacttac tctcgcaaat tgttcccacc catgagccag acagagataa 3361 atccaatgta acggtcaact taatagtaca ataaaatctc acgaaatcaa tgtctttaaa 3421 aacagc