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LOCUS NM_132187 2581 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132187 VERSION NM_132187.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2581) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2581) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2581) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2581) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2581) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2581) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2581) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2581) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2581) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2581) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2581) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2581) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2581) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2581) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2581) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2581) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2581) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2581) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2581) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2581) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2581) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2581) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2581) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_132187.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2581 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2581 /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /map="7C1-7C1" /db_xref="FLYBASE:FBgn0029970" /db_xref="GeneID:31696" CDS 148..2355 /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /EC_number="2.7.11.1" /note="CG17256 gene product from transcript CG17256-RA; CG17256-PA; Nek2-PA" /codon_start=1 /product="Nek2" /protein_id="NP_572415.1" /db_xref="FLYBASE:FBpp0071094" /db_xref="GeneID:31696" /db_xref="FLYBASE:FBgn0029970" /translation="MSGEESAGMDFSQKTLQDYEVLAVMGNGSFGTCYKVRDKSTGEL FAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAG GDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTILHRDIKPANIFLD AAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDVWAVGCLVYE MCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVII RHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYS FNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEER QVELAEERRRKKDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQ QKLEELQTREQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSH HDDTYCTIELNETSPTVAKLNLATLPAPKSLNTLRKVTFKSPQKFVTYGIENMPPPAV KPAVNPPPTGVPMQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQV AQAAATRVQRPPLAVKPPITQEQPAEVPPVANLWTKEQKKQAFELLAAMNAAEREASG GGVVGSGPGGARRQHLRQSVRERNSTLQRNRMRRSLVVATGHQKLTTRDQMVI" misc_feature 199..990 /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /note="Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2; Region: STKc_Nek2; cd08217" /db_xref="CDD:270857" misc_feature order(220..234,244..246,283..285,289..291,382..384, 436..447,457..459,463..465,598..600,604..606,610..615, 619..621,652..654,661..663,667..669,709..720) /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /note="active site" /db_xref="CDD:270857" misc_feature order(220..225,229..234,244..246,283..285,289..291, 382..384,439..447,457..459,613..615,619..621,667..669) /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270857" misc_feature order(232..234,457..459,463..465,598..600,604..606, 610..612,661..663,709..720) /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270857" misc_feature order(649..687,694..720) /gene="Nek2" /locus_tag="Dmel_CG17256" /gene_synonym="CG17256; Dm Nek2; Dmel\CG17256; DmNek2; dNek2; NEK2" /note="activation loop (A-loop); other site" /db_xref="CDD:270857" ORIGIN 1 cttgcaggta gcaatgagaa ttccagaaat cctgcatccc aaaaaccagt ctcaaatcgt 61 gtttgggttt tgtagcaagc ggatcatttg taatcggcgg cggaataccc aaaataccca 121 aagagtaaaa aaaagactta aggcaaaatg agcggagagg aatctgccgg catggacttt 181 tcgcaaaaga ccctgcagga ttacgaggtt ttggccgtga tggggaatgg atccttcggc 241 acctgctaca aggtgcgcga caaaagcacc ggtgaattgt tcgcctggaa gggaatgaac 301 tacgatgaac tggacgaggc caagtgcgac gctttggttt cggaaatcag tgttctgcgg 361 cagctccagc atcctaacat tgtgcaatac taccatcatc tggtgaaccg agaggccaag 421 tcggtgtaca ttgttatgga gtgctgtgcc ggcggcgatc tcgcccagat tgtccagcga 481 gcgagatccc agaggcagcg gtttgaggag ccctacatct ggcgggtgct cttccaactt 541 tgccgggcgc ttcaggtgtg ccacaacaaa atccccaacg gaaccatctt gcatcgcgat 601 atcaagccag caaatatttt cctggatgcg gccgggaatg ccaaactggg agatttcggt 661 ctggccagaa tgctgcgacg agatcagagc tttgccgcct cctttgtggg cactccgcac 721 tacatgagtc cggagttggt gaagggcagg aaatacgatc ggaagagcga tgtctgggcc 781 gttggttgtt tggtatacga gatgtgtgcc ctaagaccgc cgtttcgcgg cagagccttt 841 gaccagttgt ccgagaagat cgcccagggt gagttcagtc ggattccggc aatctatagt 901 actgatctgc aggagatcat cgccttcatg ctggcagtgg atcatgaaca gcgtcctggc 961 atcgaggtta tcattcggca tcctctggtg gtgcgtaata ttagcgagtt ggatggcaag 1021 ttcccaattc tagttgattc tggagaggat ttctacacac tgccttcggg tgccaggctt 1081 ttcgaggacg aagaggaaga tggagttcat ccagagctat cgagcaccat gtttacggaa 1141 cagtacagct tcaatgaagg ctatgggcaa aggagactca gcgttactgg tgtgtttact 1201 ccagatttgc gaagtgaact cttctactcc gccaagcgca aaatctttcc tgccaagaaa 1261 ctacagctgt cggatccctc tctttatgaa agtataagga gagaggagcg agcggaggag 1321 aggcaggtgg aactggcgga agagcggcgc cgtaaaaagg atcaggagca gcagaaaagg 1381 gatcaggagc ttctaaagga ggcccctagc agtcctcgtg ctcttaccca aaacatattc 1441 gatgaagtac taaagacccg tctccacgcc attcgtgccc aagaatccct gttgcagcag 1501 aagctcgaag agctgcagac ccgggagcag gagttacagc tggccgaaca gcgcgtgcaa 1561 acgctggagc ggcagatgca ggaaaaactt cttcagcagg agaaacacac ttgtagttgc 1621 agacagccga tagctccgcc cattcctcct aggaagccag cgaaatcgca ccatgatgac 1681 acctactgca ctatcgaact caacgagacg tcgcccacgg tggctaaact caatttagcc 1741 acacttccgg caccaaaatc gctaaatact ctgcgtaagg ttaccttcaa gtcgccccaa 1801 aagtttgtta cctatggtat cgagaatatg cccccaccgg cggttaaacc ggcagtgaat 1861 cctccgccca ctggcgttcc catgcaaatg agcgtatcca gcaatgattc cggtgacagc 1921 caggcctcct ccacccgcag gaaatctata ctctcgcttt tcgggttgag tcgcggatcc 1981 aaggcgacat ccaaatcctt gccatcggtc aaccaggtag cccaagcagc tgcaactcgc 2041 gtgcagcgac ctcctttggc cgtcaagcca ccgatcacgc aggaacagcc ggcagaagtt 2101 ccaccagtgg ccaatctctg gacaaaggag cagaagaaac aagccttcga gctgctggcg 2161 gccatgaatg cagccgagag ggaggcaagc ggaggtggag tcgttggttc tggacccgga 2221 ggagcacgtc gccagcatct gcggcaatcg gtgagggaac ggaattccac gctgcagcgg 2281 aaccgcatgc ggaggtcttt ggtggtggcc actggccatc agaagctaac aacgcgcgac 2341 cagatggtga tctgatcaaa ttgatcagga aagatgtgca gtccaggagc catggcaacc 2401 atggagacta tgagcgttgt gatgtggaat aagttccgaa atatttacat tttttttatg 2461 caaaaatttt tttgaatgcc atattttaaa cacgtattat tagcattaag attccagttt 2521 tttcagctgc cattcattgt gcaatttgca ttagtcttaa aataaatatt gatgaaatga 2581 g