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LOCUS NM_132170 2478 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_132170 VERSION NM_132170.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2478) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2478) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2478) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2478) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2478) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2478) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2478) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2478) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2478) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2478) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2478) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2478) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2478) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2478) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2478) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2478) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2478) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2478) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2478) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2478) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2478) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2478) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2478) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 31, 2011 this sequence version replaced NM_132170.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2478 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2478 /gene="CG11369" /locus_tag="Dmel_CG11369" /gene_synonym="Dmel\CG11369" /map="7B4-7B4" /db_xref="FLYBASE:FBgn0029951" /db_xref="GeneID:31675" CDS 309..2312 /gene="CG11369" /locus_tag="Dmel_CG11369" /gene_synonym="Dmel\CG11369" /note="CG11369 gene product from transcript CG11369-RA; CG11369-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572398.1" /db_xref="FLYBASE:FBpp0071025" /db_xref="GeneID:31675" /db_xref="FLYBASE:FBgn0029951" /translation="MHQNIWSAPQVGGSGGALKALARNVANHLKLNRSNMKRVVAQVV AEHHTLGEVADYKGHMYFAKPDRLNFHELIAQSKEAFDDLLLHEPRSVKKQAITKRSK HPTNPNVKLQMTVSPPQLEKPQKKQLTFKKSGLPKKHSRPKIRSRKKSSTTIFQLADA GRRSLNGVIIDETHLPLDGEQREILLHVPPSLVKRSRRRLRSAQIKNTSEKCPPQKPD KDPDQKKTGSQQKDGEKFTEEKILQVQKRQPEKKRSEEPKPVKKIQENHQKELIRSPS RPRSGSPSVPQTRRSPSPVRSQKLTSVQKASQALRSPPHKTLNVKNQRIRAGDTKMAT SKPSEKIKSRSMLRTVKKKLPLPQRSYDKPWILKRSKKRRLAGGSQLKKNLQRPINID VKRREKSGKGGKIQHSARSTKVEPTKISAQIKATSHVGRQMQRVNFPWYTPYQFQGAA GATQIPNAGVAIPPCQLLKDKSRKLIQRLSVTQPIPQIKRPNITSRQRHNLRLRERLM RDLQREEDIDDPLSNGSGVLRRARGGMQSSQQIKEPEQPEKEQDHRSVERVSSRIKRL PKGRRYRQPIATSERIMIPPPKVNNNNNTNNKSMSPSRPNSIPRVRRRFRSVLVDSSL GSIALMGQPVQSKQTLTPAKRHLTIAFMNKRSERTNAAVQPWK" ORIGIN 1 aacacttagg cgcctggtaa tactttgtta aatatacttt ttcaatgcta tttagcataa 61 ctgggtaatc tttcagtaaa cgcaagcatt ttcattttta cagtacactt caaaacctac 121 gggcattcga ttgacagata aaaaaaaaaa attgaaaaca aaattagaaa acacacaaac 181 aatacacatt atattataca gttttagcaa accagaacaa gctcctttcg gcccacgttt 241 aaattaattg ttttcgttac tattcttgga agaccatctc tatccccaca aatccattac 301 ccgaaggaat gcatcagaat atatggagcg cgccgcaggt gggtggttct ggtggcgctt 361 tgaaggcctt ggccaggaat gtggccaatc atctgaagct gaaccgcagc aatatgaaac 421 gagtggtggc ccaggtggtc gccgagcacc ataccctcgg ggaggtggcc gactacaagg 481 gtcacatgta ctttgccaag ccggatcgct tgaattttca cgagctgatt gcccagtcca 541 aggaggcctt cgatgatctg ttgctccacg aaccgcgatc tgtgaaaaag caagcaatca 601 cgaaacgttc caagcatccg accaatccca acgttaaact acagatgaca gtatcaccac 661 cgcaattaga aaaaccacaa aagaaacaat taacttttaa aaagtctggt ctaccgaaaa 721 aacattcaag gccaaaaatt cggagtcgga agaagagttc caccaccatt tttcagctgg 781 cggatgcagg tcgtcgtagt ctaaatggtg taatcattga cgaaactcat ttgcccctag 841 atggtgagca aagggagatc cttttgcatg tgccaccgtc gctagtcaag cggtcccgaa 901 ggcgtctccg atctgcccag atcaagaata catcggagaa atgcccaccg cagaaaccgg 961 ataaggatcc cgatcagaag aagacaggat cacaacagaa ggatggcgag aaattcaccg 1021 aggagaagat tcttcaagtt caaaagcgtc aacccgagaa gaaacgcagc gaagaaccga 1081 aaccagtaaa gaaaattcag gaaaaccacc agaaagagct gattcggtca ccttctcgcc 1141 cccgatcggg gtccccttcg gttcctcaga cccgacggtc tccttcacca gttcgttcac 1201 aaaaactgac atctgttcag aaagcgagcc aagctcttcg ctcaccaccc cacaagacat 1261 taaatgtcaa gaatcaacgc atcagggcgg gagacaccaa aatggcaact tccaagcctt 1321 cggaaaagat caaatcgaga tcgatgctaa gaacagtcaa gaaaaaactt ccattgccgc 1381 aaagaagcta cgacaagccg tggatactga aacgctctaa aaagagacgc ttggcgggag 1441 gatctcaatt aaagaaaaat ctacagcgac cgatcaatat cgatgtgaag agaagggaaa 1501 agtcaggtaa gggagggaaa atccagcatt cagcaaggag caccaaggtg gagccaacga 1561 aaatctctgc ccagattaaa gccacatcac atgttggacg ccaaatgcaa agggtaaact 1621 ttccgtggta tactccctat caatttcaag gtgccgccgg agcaacccaa ataccaaatg 1681 ccggggtcgc cataccgccg tgtcaattgc taaaagataa aagccgtaaa ctcattcaaa 1741 gactatcggt aacccaacca attccccaaa ttaaacgtcc caatatcacc agtcgccaaa 1801 ggcataatct ccgtttgcgg gagcgtttga tgagagattt gcaacgcgaa gaggacatcg 1861 atgatccact aagtaatgga tcgggggttc ttcgccgagc ccgcggtgga atgcaatcat 1921 ctcagcaaat taaggaacct gagcaacctg aaaaggagca ggatcatcgt tctgtggagc 1981 gcgtgagctc gcgaatcaag cgtttgccaa agggaagacg ctatcgccag cccatcgcca 2041 ccagcgagcg gatcatgatc ccgccaccga aggtgaataa taataataat actaataata 2101 aatcgatgtc tccaagtcgc cccaactcca ttccacgagt ccgtcgaaga tttcgatccg 2161 ttctggtgga cagcagtttg ggaagtatcg ccttaatggg tcagccggtg caatcaaagc 2221 aaacactaac tcccgctaaa cgtcatctta ccattgcctt tatgaacaag agatcagaac 2281 gaaccaatgc agccgttcag ccctggaagt agaaactgtg aggttgaatg cctccactca 2341 gcaaaaacat attctttggc acccaccttt tcaacgatga tgtattatct attgatacta 2401 ttcatttgtc ggagctaata aattatcaag ttggaatgcc aattaaatgg cgtcgtttcc 2461 atgttgagta tcctttat