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LOCUS NM_131982 2628 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_131982 VERSION NM_131982.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2628) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2628) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2628) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2628) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2628) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2628) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2628) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2628) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2628) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2628) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2628) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2628) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2628) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2628) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2628) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2628) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2628) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2628) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2628) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2628) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2628) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2628) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2628) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_131982.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2628 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2628 /gene="CG3323" /locus_tag="Dmel_CG3323" /gene_synonym="Dmel\CG3323" /map="4F4-4F4" /db_xref="FLYBASE:FBgn0029750" /db_xref="GeneID:31439" CDS 148..2397 /gene="CG3323" /locus_tag="Dmel_CG3323" /gene_synonym="Dmel\CG3323" /note="CG3323 gene product from transcript CG3323-RA; CG3323-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572210.1" /db_xref="FLYBASE:FBpp0070725" /db_xref="GeneID:31439" /db_xref="FLYBASE:FBgn0029750" /translation="MNRNRINQIRQLDRGQEGLPQVIQMQGQAQVQLGGDQGNHVGNE GQATGNQNVRRKMTYTRTEMLSRGLPTVNNSNRSARNCNTAGQDWTSQLSPRHRYAQP PKSGIPVPPLFLSSTHASTNKNVTTASRQRSFLPRVAKLPNRADKSPRKNQYREALTT EVTVEQSQTLPLGNHKAKHLVNTPHDSESSILQDGSDDKLISDSGSSMDHDKIKLAKA IRLPDEGNKSFVYVCKPVKKVKALLTARKLRASSEHLNGPKDGEFSLQEQETFKLQRT ISEEALCSRGAGEGYTLSPVEGLAQSTSTTSSQLDSPTLAAMLQRQQQFESKAVGSQD RLRLQLEEVCHRHNNQRQLEKDQYEKEQRQLELDQVSKKLPVLQHEIHMLHKVSEKLE ATLRATNIPKPRSNVIITDISRQSSGRFYTPRTSPNQLDELPIRKLCCLRLEYIPAIE MRARIIGTVCHVGFVQEFRIETKTLNELKTADESQCFYLPAPKEEPPLVQLNEDDPLQ CTNFRQLRKNPNMLFQQLRKVPGAGGSFNLLDQDTMFFNSLAYADSKIMDANTVEQLE VATREAGGGGATMAHYGGAIAYSRLSVRLNEVGVDDAAAAAAPPTPAVKSEEQGDRLT ECPCQVNNTTQTDVELSKLEKIREAEEEISSPDFTPNPSPRTRKRMKVEEPNGKVQEE DALESNLDSRPKKTRKVITRRAPDPPVRCDVEPKVRLKLLKTVLVGMVQIAVILVLIM AIGSPDIIC" ORIGIN 1 aacagtgctc ccactcccaa tatttatttt ataagctcga cattacaata aatcgaacac 61 aaaacgaagg tcacatatta tatatatata tatatatata tatatatagc agatgtcgca 121 atagatcgct gtagcggagc aaccaacatg aatcgcaatc gaatcaatca gatacgccag 181 ttagatcgcg gccaggaggg actgccgcaa gtcatccaaa tgcagggaca ggcacaggtt 241 cagctgggcg gcgaccaggg taatcacgtc ggcaacgagg gacaagcgac gggcaatcag 301 aatgtccgcc gcaagatgac ctacaccaga acggagatgc tgtcgcgtgg cctgcccacc 361 gttaacaaca gcaatcgttc ggctcgaaac tgcaacacag ctggacagga ttggaccagt 421 caattgtcgc ccagacatcg ttacgcacaa ccaccaaagt ccggaatacc ggtccctccg 481 ttgttcctaa gcagcaccca tgcaagcacc aataagaatg tcaccactgc cagtcgtcag 541 cgtagtttcc tgccccgagt ggccaaattg ccaaacagag cggacaaatc gccgaggaag 601 aatcaatatc gcgaagctct gaccactgag gtcacggtgg agcaatctca gacgttgcca 661 ttgggcaatc acaaggctaa acatttggtg aatacaccac atgacagcga gagcagcatt 721 ctgcaggacg gcagtgatga taagctaata agcgacagcg gcagctcaat ggatcacgac 781 aagatcaaat tggccaaggc catacgcctg ccggatgagg ggaacaagag tttcgtctat 841 gtatgcaagc cggtgaagaa ggtcaaagct ctgttgactg ccagaaaatt gcgcgctagc 901 agcgagcact tgaatggccc aaaggatggt gagtttagct tgcaggaaca ggagacattc 961 aagctgcaga ggaccatttc cgaggaggct ctatgcagcc gtggcgccgg cgagggatac 1021 acactctcgc ccgtcgaggg actggcacag agcacatcga ccacctccag ccagttggat 1081 agtcccacat tggcggccat gctgcagcgc cagcagcaat tcgagtcgaa ggcggttggc 1141 agtcaggacc gtttgaggtt gcaattggag gaggtgtgcc acaggcacaa taatcagcgc 1201 cagctggaaa aggatcagta cgagaaggag cagcgccaat tggaattgga tcaggtgtca 1261 aagaaactgc ccgtgctgca gcatgagata catatgctgc ataaggtgag cgaaaaactg 1321 gaggcgacac taagggccac caatataccc aagccgagaa gcaacgtaat cattacggat 1381 ataagccggc aatcatctgg acgtttctac acaccgcgca ccagtcccaa tcaattggac 1441 gagctgccca ttaggaaatt gtgttgtttg cgcttggaat atataccagc tattgagatg 1501 cgggcacgca tcattggcac cgtttgccat gtgggctttg tccaagagtt tcgcatcgag 1561 accaaaacac ttaacgagct aaagacggcg gatgagtcgc aatgcttcta tttaccggca 1621 cccaaagagg aaccgccatt ggtccagctc aacgaggatg atccattgca gtgcaccaac 1681 tttcgtcagt tgcgtaagaa tccgaatatg ctgtttcagc aactgcgaaa agtgcccggc 1741 gctgggggat cctttaatct tttggatcag gacacaatgt tcttcaatag tctggcctat 1801 gcggattcaa aaatcatgga tgctaacacc gtcgaacagc ttgaggtggc cacacgcgag 1861 gcgggtggcg gtggagcaac tatggcccat tatggcggag ccattgccta ttcacgcctc 1921 tcggtgcgtc tcaacgaagt gggcgtggat gatgctgctg ctgctgctgc tcctcctact 1981 cctgcagtga aatcagagga gcagggcgat cgtctaactg aatgtccttg tcaggtgaac 2041 aataccactc aaacggacgt ggaattgtcc aagttggaga aaattcgaga agcggaagag 2101 gaaattagtt caccagactt tacacccaat cccagtccca ggacaaggaa gcgaatgaaa 2161 gtggaggagc cgaacggcaa agtgcaagag gaagacgcgt tggaatccaa tctcgattcg 2221 cgaccaaaga agaccaggaa agtaataact cgtagagcgc ccgatccacc cgttcgttgt 2281 gacgtggagc ccaaggtgcg tttgaagttg ctcaaaaccg tattggtggg aatggtccag 2341 atcgctgtta tattagttct catcatggcc atcggatctc cggatattat ctgctaagct 2401 acacaaccat cgaaatattg ccaagatgcc atagaaaaag aagcagtgaa tgcaaaagta 2461 ggagagagaa aaactgtagc gggaaatgtg gcgataatag caagtagcgg gaaaagcacc 2521 gataaccgga ttcggtgttt gatttcacat tatttttcga atttattgtt ttcttactcg 2581 ggcccaagcg aagccacgtc aaagttaata aaatttcatg tgtattgc