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LOCUS NM_131951 2292 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_131951 VERSION NM_131951.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2292) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2292) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2292) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2292) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2292) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2292) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2292) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2292) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2292) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2292) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2292) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2292) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2292) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2292) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2292) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2292) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2292) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2292) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2292) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2292) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2292) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2292) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2292) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_131951.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2292 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2292 /gene="CG15473" /locus_tag="Dmel_CG15473" /gene_synonym="Dmel\CG15473" /map="4C11-4C11" /db_xref="FLYBASE:FBgn0029719" /db_xref="GeneID:31401" CDS 50..2194 /gene="CG15473" /locus_tag="Dmel_CG15473" /gene_synonym="Dmel\CG15473" /note="CG15473 gene product from transcript CG15473-RA; CG15473-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_572179.1" /db_xref="FLYBASE:FBpp0070657" /db_xref="GeneID:31401" /db_xref="FLYBASE:FBgn0029719" /translation="MRNLCWLLAVPMAILPLGCAIVGAGRDLLLTPRQGHQLSGKRIF YEEPAEERFLNQRRSQSERPWERTLKHVTYVTLFTDAAMGAAAGNLSQLHEYHDFLQT PYVPADEQRGGAATGGAPSARFGDIMTLAKGYLEQLPGPGNASSYRFVEGGTCYQLNC PNSNPKQRQALWQVQRIRHRDGDKGHHYHYEMKFSVTPLDNKAWQPHHQQMSYIQKES DYPASFGRLAAHDHGFAQRRQDRERYGAATGGNAEQSQATFVHGIFQPAPPPKLNIGE YLKGAVAQGGPKIELYTGGLLNLGLRPNYVVPTTFRPSYPTALKFGNHPELERFPSHS GDLGNAGNVGPAVPGDLAGISGAVTHHFHHHFYVAPGAGDAQLHPELGYRLPNSSPPQ PITPAGNPSSNLYTHHQTVQFPSSNSGSSESLEEQDQDLLLRTPQIYGQASKYQTAKL PPLLIYAGGNSGDDDKSFVQSEPLEETVYRYSEPDPLYVHQNPIDVLQDKQPPEEETD KGQHQEQASDQKRGEQRPVVSLEQPELSTTVSAPSSNAGTTTETASTERSTHVIPTTI ASFVSTSTHFSPLRSISRYRTTPKITAGRSTTTTTSTSTEPPLNKWAKRRKEQDSKAK SSHRHEAFVSTTSSTSTTTSTTATPPSTIAASTGVPLASPLPPAPSKEVVEVLTQKSV SRSVSIKVGENGEEIPIIVDDEENEVKPVLTN" ORIGIN 1 gtccattttg tgtttatgca ttgatgtgct aggtgcgcta ggccagacaa tgaggaatct 61 ctgctggcta ctggctgttc ccatggcaat cttgcctttg ggctgtgcca ttgtgggtgc 121 gggtcgcgat ctcctgttga caccgaggca aggacatcag ctgagtggca agcgaatctt 181 ctacgaggag ccggcggagg aaaggttcct caaccagagg cgtagccaat cggagcgtcc 241 ttgggagcga acccttaagc atgtcacata cgtgaccctc ttcaccgatg cggccatggg 301 cgcagcagct ggaaatctaa gccagctgca tgagtatcac gacttcctgc agactccata 361 cgtgccggct gatgagcaga gaggaggagc tgcgactgga ggagcaccat ccgcgcgctt 421 cggcgatatt atgaccctgg ccaagggcta cttggagcag ctaccaggac cgggcaacgc 481 atcctcctat cgcttcgtgg agggcggcac gtgttaccaa ctcaattgcc ccaactcgaa 541 tcccaaacag cgacaagcct tgtggcaggt tcagcgcatc cgtcatcggg acggggacaa 601 gggtcatcac taccactacg agatgaagtt cagtgtgaca ccgctcgaca acaaggcctg 661 gcagccgcat caccaacaga tgagctacat ccaaaaggag tccgactatc cagccagttt 721 cgggcgtttg gcggcacacg atcacggctt cgcccagcgc cgccaggata gggagagata 781 tggcgctgca accggtggaa acgcggagca atcgcaagcg acatttgtcc atggcatttt 841 tcagccagct ccgccgccaa aactcaacat cggtgagtat ttaaagggcg ctgtggcgca 901 aggcggtcca aaaatagagt tatatactgg tggtctgctc aatctgggac tgcggcccaa 961 ttatgtggtc ccgactacat ttcgaccaag ctatccgact gcgctgaaat ttggaaatca 1021 tccggaattg gaaagattcc catcacacag cggtgatttg ggtaatgctg gtaatgttgg 1081 tccagcggtc cctggggatt tggcaggcat ttcgggcgct gtaacccatc atttccatca 1141 ccatttctat gtggcacctg gtgccggcga tgcccaattg catccggaat tgggctaccg 1201 cttgcccaac tcctcgccac cgcaaccgat cacaccggct ggcaatccgt cctcaaactt 1261 atatacccat catcagacag tgcagtttcc cagctccaat tcgggttctt ccgaatctct 1321 ggaggaacaa gatcaggatt tactgctgcg gacaccacaa atttatgggc aggcttccaa 1381 gtatcaaaca gccaagctgc cacctttgct tatctatgcg ggcggcaatt ccggcgatga 1441 tgacaagtcc tttgtgcaaa gcgaaccgct ggaggagacc gtctatcgct attccgagcc 1501 ggatccttta tatgtccacc agaaccccat cgatgtgctg caggataagc agccgccgga 1561 ggaggaaacc gataagggac agcatcagga gcaggcaagt gaccaaaagc gaggggaaca 1621 gcgcccagtg gtcagtttgg agcagcccga actgagcaca actgtttcag cgccatcttc 1681 caacgctggc acaaccactg agactgcaag cactgagaga tccacacacg tcatccccac 1741 cacgatcgcc agttttgtgt ccacctccac gcactttagt ccattgcgct ccattagtag 1801 gtatcgcacc acgccaaaga taacagctgg acgatccacc acaaccacta catccaccag 1861 cacggaacca ccgctgaata agtgggccaa gcggcgaaag gagcaggaca gcaaggccaa 1921 gagcagtcac cgccacgaag ccttcgttag caccacttcg tcaaccagca cgacaacttc 1981 aaccacagca actccgccgt ccacaatcgc tgcatccact ggcgttccat tggcgtcgcc 2041 actgccaccg gcaccatcca aggaagtggt ggaggtgctc acccagaaat cggttagtcg 2101 atctgtgagc atcaaggtgg gcgagaacgg cgaggagata cccatcattg tggacgacga 2161 ggagaacgag gtgaagccag tgctgactaa ttagctgcct acccatctat cttaaatcct 2221 aattatccta tcctatattt aagcctagcc gtaagcacac ttaatcccac aataaattca 2281 agtaatccgt ac