Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_130669 2425 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_130669 VERSION NM_130669.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2425) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2425) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2425) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2425) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2425) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2425) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2425) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2425) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2425) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2425) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2425) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2425) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2425) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2425) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2425) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2425) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2425) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_130669.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2425 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2425 /gene="CG2701" /locus_tag="Dmel_CG2701" /gene_synonym="anon-3Bd; Dmel\CG2701; EG:95B7.9; II" /map="3B3-3B3" /db_xref="FLYBASE:FBgn0024973" /db_xref="GeneID:31261" CDS 153..2360 /gene="CG2701" /locus_tag="Dmel_CG2701" /gene_synonym="anon-3Bd; Dmel\CG2701; EG:95B7.9; II" /note="CG2701 gene product from transcript CG2701-RA; CG2701-PA; transcript II; coding region II" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_570025.1" /db_xref="FLYBASE:FBpp0070475" /db_xref="GeneID:31261" /db_xref="FLYBASE:FBgn0024973" /translation="MLDNDTSNNNNCNPQNLPLDELKFALSGKDGVRRNVPALDEHWV QREKPFASYLCMLSSYGRLKSGAALEEWTFAANNFRGDMEFLLSLTQHEFWSYMVYDE SAMAAVVTFLQRANPYYRQTDVSRDKELDQAHLLYGQLLDLVVRLIMRLCTGKESDSE WISPKQHGSLLYSNYLISVPLLFDLLIAVGDAEPENVELLRQIFDKVLEVQPEYQKDL KEALIFYESAFLSMQIQVENEGCEGAGGGASLDVDLETPYDDVVLFAMDCAYTLRLLL LLCPQLLETIEQLRLAPSIANFYDMTVPMLYKNIYLVNPGASSLRWLNETRQQYIFIV RRVVSLQMESGRGQQLVEVMQECLSAQNFVVDYQRQFPLEHDMKLLIQRCPNIKNYEV DFVVSGYQKALASCPNGIMADDMASNGVQVTGNVQDEEFKNGDSSRTSPQPSPTANGT TRDIDLEVTAVLEVLPDLGSGFIRRLLIRYDNSEQVIAAILDDNLPPDLAQMDRQEVY IPPDPQDKQQRQTGLRHFNVHDGDRYDVLTRDQPECIIKQGKGLPGAPRNAEQLLDDK RDLKQLKERYQKYAMVEETTLERGEYDDEYDDSYEAQNEGQAPPVSLLRGRLQEAASS SAYNAQDELENDDEESSGGHSDPEPSMRTNRDFCENPEVIRARYEQRQLSKYGQKSGG HGASPSVVGAPKGQGQSQQTQRSRGQKEAHKSTRANHNRKAGAAFKRSKGMMG" misc_feature 1515..1631 /gene="CG2701" /locus_tag="Dmel_CG2701" /gene_synonym="anon-3Bd; Dmel\CG2701; EG:95B7.9; II" /note="CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins; Region: CUE_ASCC2; cd14364" /db_xref="CDD:270547" ORIGIN 1 ttatgacatt acaagctgag cctgcgtgcg ccaccttatc aatgtgctgc caccttgcat 61 cgcacgaaat tcgctagttt tattgaattt tgttattgaa gaaataccct agcaacaatt 121 cgagagtgtt gccagccaaa gggggggccg acatgctgga caacgacacc agcaacaaca 181 acaactgcaa cccacagaat ctgccactgg acgaactcaa gtttgcactt tccggcaagg 241 atggggtgcg caggaacgtt ccggcgctgg acgagcactg ggtgcagcgc gagaagccct 301 ttgccagcta tttgtgcatg ttgagctcct atggacgcct aaaatccgga gctgcactgg 361 aggaatggac cttcgcggcg aacaatttcc gtggggacat ggagttcctg ctgagcctga 421 cgcagcacga attctggtcc tacatggtgt acgatgaatc ggccatggcg gccgttgtca 481 cattcctgca gcgcgctaat ccctactaca gacagacaga tgtcagccgg gacaaggagt 541 tggaccaggc ccatctgctg tacggacagc tgctcgatct cgtcgtgcgt ctgataatgc 601 gactgtgcac cggtaaggaa tcggactcgg agtggattag cccgaagcaa cacggcagcc 661 tgctgtacag caactacctg atctctgtgc cactgctctt tgatctgctc atcgctgttg 721 gcgatgcgga gccggagaac gtggaactgt tgcgccagat cttcgacaag gtgctggaag 781 tgcagccgga gtaccaaaag gatctgaagg aggcgctgat cttctacgag agcgctttcc 841 tcagcatgca gatccaggtg gagaacgagg gctgcgaagg tgctggcggc ggggcgtctc 901 tggacgtcga cttggagacg ccctacgacg atgtggtgct cttcgccatg gactgcgcat 961 acacgctgcg cctgctgctg ctcctctgtc cccagctatt ggaaaccatc gaacagctgc 1021 gtttggcccc aagcattgcc aatttctatg acatgactgt gcccatgttg tacaagaaca 1081 tctacttggt gaacccgggt gcgagttcgc tgcgctggct aaatgagacg cgccagcaat 1141 atatcttcat cgttcgtcgc gtggtcagcc tgcagatgga gtcgggacgg ggacagcagc 1201 tggtggaagt gatgcaggag tgcctttccg cccagaactt cgttgtggac taccagcggc 1261 agtttccgct ggagcacgac atgaagctgc tgatccaacg ttgcccaaat atcaagaact 1321 acgaggtgga cttcgtggtg tccggttatc agaaggcact ggccagctgc cccaacggca 1381 taatggccga cgatatggcc agtaacggtg tccaagttac ggggaacgtc caggacgagg 1441 aattcaagaa cggcgactcc tcgcgcactt ctccacagcc gtcgccgacg gccaacggaa 1501 cgacaaggga cattgacttg gaagtcaccg ccgtgctgga agtgctgccc gatctgggca 1561 gtggcttcat aaggcgcctc ctcatccgct acgataacag cgagcaggtc attgccgcca 1621 ttctggacga caatctgccg ccggatctag cgcagatgga ccgacaggag gtgtacattc 1681 cgcccgaccc gcaggacaaa cagcaacgcc aaacgggcct gcgacacttc aacgttcacg 1741 acggcgatcg ctacgacgtg ctgacgcggg accagcccga gtgcattatc aagcagggca 1801 agggattgcc gggagcgcca cgcaatgcgg aacagttgct ggacgacaag cgcgacctga 1861 agcagctaaa ggagcgctac cagaagtacg ccatggtcga ggagaccacg ctcgagaggg 1921 gcgagtatga cgacgagtac gacgacagct acgaggctca aaacgagggt caagcgccgc 1981 ctgtgagtct gctgcgcgga aggctccagg aagccgcctc cagttcggcg tacaacgcac 2041 aggatgagct ggagaacgac gacgaggaga gctccggcgg ccattcggac ccggagccgt 2101 cgatgcgcac caacagagac ttttgcgaga atccagaggt gatacgcgcc cgctacgagc 2161 agcgccagtt atccaaatac ggccaaaaga gtggtggaca tggagcgagt ccctctgtgg 2221 tcggagcacc caagggccag gggcagtccc agcagacgca gcgcagtcgt ggccaaaagg 2281 aggcccacaa gtccactcgt gccaatcata atcgcaaggc aggagcagcc ttcaagcgca 2341 gcaagggcat gatgggttag gcgcagcgca gctcgataga ggggatttag attgaaataa 2401 aattatctaa aattggtgta tctgt