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LOCUS NM_130666 2283 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_130666 VERSION NM_130666.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2283) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2283) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2283) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2283) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2283) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2283) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2283) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2283) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2283) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2283) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2283) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2283) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2283) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2283) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2283) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2283) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2283) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2283) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2283) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2283) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2283) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2283) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2283) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Oct 1, 2002 this sequence version replaced NM_130666.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2283 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2283 /gene="CG2681" /locus_tag="Dmel_CG2681" /gene_synonym="100G10.2; Dmel\CG2681; EG:100G10.2" /map="3B2-3B3" /db_xref="FLYBASE:FBgn0024997" /db_xref="GeneID:31258" CDS 281..2161 /gene="CG2681" /locus_tag="Dmel_CG2681" /gene_synonym="100G10.2; Dmel\CG2681; EG:100G10.2" /note="CG2681 gene product from transcript CG2681-RA; CG2681-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_570022.2" /db_xref="FLYBASE:FBpp0070458" /db_xref="GeneID:31258" /db_xref="FLYBASE:FBgn0024997" /translation="MSTLANGGKEEDLKILAQLKSIEQINEQRRIFLNSTINEEVPEA TNGSTVREEDLEKNLKAIDEPQSTKMPPEEVAKKTPDEVPAQEQQKEPEKVEPAKPVP PNTLTLNVKYATLPSPNVVTLRSPLSPPPKPPMLGRTRSTGPADGKGPASNGALSPDS SIIRQSFPEGVITPSKPEKSPATPSEEGPPTVSARHYEGLIEELRCPGCAGAMKAPIL LCKSGHSVCEQCTRILLMCPLCKEPFTNSRSLTVEALCAKAHFRCGHASGGCQVRMPV VLLPWHEQQCMYKPMKCFMGRVWGDCRWQGREVQWKEHLEEQHDDRLFRSSSADLEWN LGTRRKPLTGYYVFQAHDEMFNFYEIHDRQRVLFTMTCTSNRRDSKYNFAYEVTVLLP DNEALSMTQKFPVHSEYDKDILMEGTCVSIPLTELNRFLDQDKVLHYRVSVLAVKSPR RAKPPRQNLPQPADLEQAPNGGVNVKSVPTNMIITRTYKEAIGEVTKADVASPDSEED PAAADGAGAIGADGAGGVELERKWGTPQLHFNRKYLRNTLNDATPAEDELRPLAADLR NGNGDDKLSQCSNSTSYTKKVSDSLRRSFRALKADIVELRPFSKKAVRDGSTSPVQSN GK" misc_feature 896..1030 /gene="CG2681" /locus_tag="Dmel_CG2681" /gene_synonym="100G10.2; Dmel\CG2681; EG:100G10.2" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:473075" misc_feature order(896..898,905..907,938..940,950..952,959..961, 968..970,989..991,998..1000) /gene="CG2681" /locus_tag="Dmel_CG2681" /gene_synonym="100G10.2; Dmel\CG2681; EG:100G10.2" /note="cross-brace motif; other site" /db_xref="CDD:438410" misc_feature 1022..1606 /gene="CG2681" /locus_tag="Dmel_CG2681" /gene_synonym="100G10.2; Dmel\CG2681; EG:100G10.2" /note="Seven in absentia protein family; Region: Sina; pfam03145" /db_xref="CDD:460824" ORIGIN 1 tcgcttgggg ttcggctgcg tttttggttt ggtttggttt ggtttggttg gttttggctg 61 cggctttttg gtatatcgca tcacaagtcc aaatcgattg ccgggccagc tagtttagtt 121 aggcgtctcc ctgataagat acgaaagtac gagttgcgaa cgcttgcgaa gaattccgcc 181 agaagaaaag cacattcggc cacctgagct tggagcaact gttcccggcg gttatacaac 241 cagacgacaa ctagtcaaaa actaaggaaa attgccgaaa atgtctaccc tggccaatgg 301 tggaaaggag gaggatctaa aaattctggc tcagctgaag agcatcgaac agatcaacga 361 gcagcgccgc atatttctca acagcacgat caatgaggag gtgccggagg ccacaaacgg 421 atcgacggtt cgggaggagg acctggagaa gaatctgaag gccatagacg agccgcagtc 481 tacgaagatg cccccggagg aggtggcgaa gaaaacgcct gatgaggtcc cagcccagga 541 gcagcagaag gaacccgaaa aggtggagcc agccaaacca gtgcccccca acacgctcac 601 cctgaacgtg aaatacgcca cgctgccaag tccgaatgtg gtgaccctgc gatccccact 661 ttcgccgccc cctaagccgc caatgctggg ccgcacccgc agtacaggtc ccgccgatgg 721 caagggtcca gcgagcaatg gagctctctc gccggacagc tccataatcc gtcagagctt 781 tcccgaaggc gtcatcacgc ccagcaagcc ggaaaagagc cctgccacgc ccagcgagga 841 aggcccgccg accgtctccg cccgccacta cgagggactg atcgaggagc tgaggtgtcc 901 cggctgtgcc ggcgccatga aggcgcccat ccttctgtgc aagagtggcc acagtgtctg 961 tgaacagtgc acccgcattt tgctcatgtg cccgctctgc aaggaaccct tcaccaactc 1021 ccgatcgctg accgtggagg cgctgtgcgc caaggcgcac ttccggtgcg gacacgcctc 1081 cggcggctgc caggtgcgga tgccggtcgt cctgctgccg tggcacgaac agcagtgcat 1141 gtacaagccg atgaagtgct tcatgggccg agtgtggggc gattgccgct ggcaggggcg 1201 cgaggtgcag tggaaagagc atctggagga gcagcacgac gaccgcctgt ttcggtcaag 1261 cagcgctgat ctggaatgga atctaggcac gcggcggaaa ccgttaaccg gctactatgt 1321 cttccaggcg cacgacgaaa tgttcaactt ctacgagatc cacgaccgcc agcgtgtgct 1381 gttcaccatg acctgcacgt cgaaccggcg ggacagcaag tacaacttcg cctacgaggt 1441 gacggtgctg ctgccagaca acgaggcgct gtccatgacc cagaagtttc ccgtgcacag 1501 cgagtacgac aaggacatcc tcatggaggg cacatgtgtc agcattccgc tgacggagct 1561 taaccgcttt ctggaccagg acaaggttct tcattaccgc gtgagtgtgc tggcggtcaa 1621 gtcgccgcgt cgcgcaaaac cacctcgcca aaatctgccg cagccggcgg acctggaaca 1681 ggccccgaat ggaggcgtca acgtgaagag cgtgccgacc aacatgatca ttacgcgcac 1741 ctacaaggag gccatcggcg aggtgaccaa agcggatgtg gccagtccgg actcggagga 1801 ggatccggct gcagccgacg gcgctggggc cattggagcc gacggagccg gcggtgtgga 1861 gctcgagcgc aagtggggca caccgcagct gcacttcaat cggaaatatc tgcggaacac 1921 tctgaacgat gccacgcccg cggaggatga gctgcgtccg ctggccgccg atctgcgcaa 1981 tggaaatggc gacgataagc tctcccagtg cagcaacagc acgagttaca cgaaaaaggt 2041 gtcggattcg ctgcgaagaa gcttccgggc actcaaggcg gatatcgtgg agctgcgccc 2101 gttcagcaag aaggcagtca gggatggatc gacctctccg gtccaaagca atggcaagta 2161 gtgattccgt gtgtgtgcct tttctaattc gtcaacagtc gcaagagttg aaagcatgta 2221 aatatagcaa atgttttaat ctattgtata tgtactaaaa ccgaaataaa taaaataaaa 2281 aat