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LOCUS NM_130553 3511 bp mRNA linear INV 26-DEC-2023 H (CG32813), mRNA. ACCESSION NM_130553 VERSION NM_130553.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3511) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3511) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3511) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3511) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3511) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3511) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3511) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3511) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3511) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3511) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3511) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3511) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3511) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3511) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3511) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3511) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3511) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3511) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3511) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3511) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3511) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3511) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3511) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_130553.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3511 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3511 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /map="2A1-2A1" /db_xref="FLYBASE:FBgn0052813" /db_xref="GeneID:31089" CDS 488..2233 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="CG32813 gene product from transcript CG32813-RH; CG32813-PH" /codon_start=1 /product="uncharacterized protein, isoform H" /protein_id="NP_569909.2" /db_xref="FLYBASE:FBpp0303349" /db_xref="GeneID:31089" /db_xref="FLYBASE:FBgn0052813" /translation="MEKTPRYTQRERNMVLSYAAQYKDVIENKRTDAESNRKKDEVWL QIAKEFNSRVYHQRSAKQLRQLYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVA QYIAEQLSPEGAGGGGGGGKQGGAGNGGGNGHQSDDYDDSKYHLFSSHLQMPHYHEGM DTDVILIKSETISDNEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQL QQVGSSGAAGGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAPKP DITIQTVGHIRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLPLTAEQVQQHT LLNGLGLSAVNPAQSLQAAINAAYGSAAPSSSVAISSRRTPPTLQLPRLQRGNINNSH HTAGSTSNSAVASNGVQLLLNGGHHAQMTHNHLARDKTGGVAIGAAGSFNGYNGLAVA GTVCSALNSSGSGAGSGGSSANNSGVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLR IEESKRKIDLINAQIEYWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASAS SSASANVLQTQASTS" misc_feature 494..724 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="Myb/SANT-like DNA-binding domain; Region: Myb_DNA-bind_5; pfam13873" /db_xref="CDD:433544" ORIGIN 1 tccaaggttt aaagcaacaa ctgtgagcag tgaaaaaaaa aataacagaa cgagcgttca 61 gctataaacg atatcaaacc caataggaag aaacgcacac aaagagccga aaacaaagtc 121 ttcgccagag agcgctgagt gggacggaga agggaagagg caatagcgag cgggacagcg 181 agcggctggc ggtcagcgac gttggacaag tagttgaaaa tattgcgcat acgccgcgtg 241 aaccagaggc acagagtaga gcagcaagcc gcgcgttctt cgttctgcat cgcacaaata 301 cagctttgag aaagccagca gaggagtggg gtgcaaggaa acacattacg catcgaggag 361 gagaaggagg agaaggagaa gaaggaggag acgaggaggg ccgaggatta gcggctgcga 421 aggaagtcca tttcaaagtg cagccggcca caaatccagc ttcacgacgt cttgcaaacg 481 gttgaaaatg gagaagactc cccggtacac gcagcgggag cggaacatgg tgttgagcta 541 cgcggcgcag tacaaggatg tgatcgagaa caagcgcacg gacgcggagt ccaaccgcaa 601 gaaggacgag gtgtggctgc agatcgccaa ggagttcaac tcgcgggtct accaccagcg 661 cagcgccaag cagctgcgcc agctttacaa gaacatgaag ctgctgctca aaaaggacct 721 atgcggcgag gacaagagca accattcgtt catggacctg ctcaacacgc tgtcgcacca 781 ggagtccgtg gcccagtaca ttgccgagca gctgtcgccg gagggcgcgg gcggtggcgg 841 cggcggcggt aagcaaggcg gcgcgggcaa cggaggcgga aacggacacc aatcggacga 901 ctacgacgac tccaagtatc atttattttc ctcacacttg cagatgcccc actaccacga 961 gggcatggac acggacgtga tccttatcaa gtcggagaca attagcgaca acgagcagac 1021 ggacaatggc atggactgcc tggacgagga cgatgacgac gactgcttga gccacaaggc 1081 gccggaggtg tgcctcgagg aggaggacga cgtgctcttt ccaacggacg tgcgccagct 1141 gcagcaggtg ggatcgtccg gagccgccgg cggtggtgtc tccggaggct cccttcccgg 1201 aaacatgtct agcaacggga ttaccgaaac cagtcgccgc gccgcaagct cgcccgtgtg 1261 ctccacgaag acctcgatta gttccagcgg gagctacgca tcagcgccca aaccggacat 1321 cactatccag accgtgggcc acatacgcgt gggcagcttt gccaacatca acaagacgct 1381 gcagaacggc ggctccggca caggagctgt cctatcagcg gccagcaatg gcggctccag 1441 tgccagtgga gtgctgccgc tcacagcgga gcaagtgcag cagcacacgc tgctgaacgg 1501 cctaggattg tccgccgtga atccggctca gtctctgcag gcggccatca atgccgccta 1561 tgggtccgcc gctccatctt catcggtcgc cattagcagc cgccgcaccc ctcccactct 1621 gcagttgcca cgccttcagc gcggaaacat caacaatagc caccacactg ccggcagcac 1681 aagcaattcc gcggtggcct ccaatggagt gcaactgttg ctcaacggcg gccaccacgc 1741 acagatgacg cacaaccatt tggcgcggga caagacagga ggcgtggcca tcggggcggc 1801 gggcagtttc aacgggtaca acggactggc agtggcgggc acagtgtgca gcgccttgaa 1861 cagcagcgga tccggagccg gaagcggcgg gagcagtgcc aacaacagcg gcgtgggcct 1921 ggggatcggc ggggcacaca cgtcgggcag cggaggaagt ggcagcggtg ggacgaggag 1981 ccagcaccag gagctgatga attcgctgag gatcgaggag agcaagcgga aaatcgacct 2041 gatcaacgcc caaatcgaat actggcagac gctcacccgc aagctgaaca gtcaggcgaa 2101 tcacatgccc aatcctgcgt gcccgtgcca cttccctgga gccagtgtgc tctcgcccgt 2161 cgccgtgacc gccgctagtg cctcatcgtc cgcttccgcc aatgtgttgc agacgcaggc 2221 cagcaccagc tagtccgcag ccaaggggcg gttcgaacta gtcgggggtc ctgcgggcga 2281 aagcgaaagc gacagcgaca tcatctcgat agtggacata gatgatgggc ggtctaggga 2341 ggacgagcag tcggaggacg atggcgagaa ccgtgaccag gccataacgg acctgacgct 2401 acccgacgaa gacgaggaag acgatgtaga cgaagatgac tcacaggatg ccttggtcag 2461 ggatgttggc gtggtgggcg gcctgtcgtc gccagataca ccgccccact cctctccgcc 2521 gccagcgaag cgctcgaagc gccaggaagt cacctccgag ctcctgaggc agctggccct 2581 gcagcagaat caggatcccc aggaggggtg ctagtatttt gtctagtttg ctaattttat 2641 acttgctacc atggattgac gcaaccactt tgtaacatta attttaccat atatatttat 2701 ttacgcccag tttgagtgcc aaaacagaaa ccaagattgg ggccttgcca tcgaaaatgc 2761 ttgccaaagg acctgctgaa ataaccggtc ataaccactc gcgacccact atttatttgc 2821 cagcctaact gaaacatagc gattcatctc attttaaaat gtcttgcgtc gcctattttt 2881 ttattgcctt tttttttcta tacatgtaac gtgtttattt ttaagttttc ctacgagctg 2941 ctaccaaaaa gaataagaag aagaaggtga ctatcttgaa tgtacattta ctttacaaaa 3001 ctagacctta cttacttact taattagaga tcgagcagct aagaacgcat gaaaatgaaa 3061 tgtacaaatg tggttcctaa tctagtccct aaagtcaaaa gtgaagaacg aaagagctac 3121 agaaaagaaa tcgaaattgt tacgcctagc cgagaacttg tgtattattt ttttatatcg 3181 cttagattgt tcccccgagg aaagcattga aggaactgta gctaatttat gtacttaatg 3241 aaccagtgaa accaaaccaa tgatttgaaa tggtgtaaag agaagaaact tgctagtcgc 3301 cgctgcataa ctgtgtaaat gtggcacaca aaccatttag ttagtgttag tgctactgta 3361 cgtgtaaaat acaattaatt gcctatccag acccagtaac cacaatttac aaggaagcac 3421 acaccaaacg aaactgaaaa ccaagaaaac aaaactattt atacaatttt gtaaacaaga 3481 acttattaat aaaacaatga atttactttg t