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LOCUS NM_130536 2579 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_130536 VERSION NM_130536.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2579) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2579) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2579) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2579) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2579) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2579) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2579) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2579) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2579) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2579) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2579) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2579) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2579) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2579) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2579) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2579) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2579) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2579) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2579) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2579) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2579) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2579) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2579) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_130536.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2579 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2579 /gene="CG14625" /locus_tag="Dmel_CG14625" /gene_synonym="Dmel\CG14625; EG:BACR42I17.8" /map="1E4-1E4" /db_xref="FLYBASE:FBgn0040358" /db_xref="GeneID:31066" CDS 73..2343 /gene="CG14625" /locus_tag="Dmel_CG14625" /gene_synonym="Dmel\CG14625; EG:BACR42I17.8" /note="CG14625 gene product from transcript CG14625-RB; CG14625-PB" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_569892.1" /db_xref="FLYBASE:FBpp0070195" /db_xref="GeneID:31066" /db_xref="FLYBASE:FBgn0040358" /translation="MGANILSRRQWCLCLLIIMSTLCSAVTVTSGTSGNSRRRSGGSG AVSSLEVTGEKAFPDQLAMAASRRGSDDRGYSRRGSVTQSRLKEAPSKDYSFGQVELN LVRPEHESHPKQTAESGSGAYVNLEDSKSAAEYVANAIKLAYKQPPTQLRGQSQVQNP SNNHIQAQKEQQPTTQRSYQEQRRDREILEMQLQKELHQQALLLSSGPSSPSSSGSSS SSSPPSPALAPAPVYEKEPVTRSYELYEHATEDESHVQAQEQDIERHYRPKYSNNYNN IYAPYQPPQIYRNLEAEAEEKVRVSASTEIPKSEIMKQIEKSVIKYMKELEAEGKIIS TPQETATPPPPPPPPPITKTYYKSQTLSSGLHSGSIPSSHSHSHSEEKRYSSSTVRPK YTVPPTTKQQQLHHHQQQVLHPQHHSHQIAGKLRGSSLAITNSKPIQHFQSETETAYQ APDLPVDELSPNVEFIYKIKTRAPLQTATVKTVSKPYTLPLKSAEHFDHSAALKNIEE FDLSHVVPTPDRVERERERERERERDSREDQERLTNSGKQHKLYFNSEIYHDINALPY KSKEAALQEYRHKLKASGSSGELHPDYKGYSSSGYFAEPEAETENESKLILNEEGYPY HYVLKKETLLDDHEPWLSHAHGHAHQHTHGHAHSHSNSNKHPSLEYDSYSPKFNNNPE GYGYQHTYKVRGQPAGGAGSGGVAGIGSNTGTGAGKRGKRGGGGHPRQEAIKKQLRSS EVKDLEASLALRPPPK" misc_feature <1978..>2082 /gene="CG14625" /locus_tag="Dmel_CG14625" /gene_synonym="Dmel\CG14625; EG:BACR42I17.8" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl21514" /db_xref="CDD:473893" ORIGIN 1 tggcgcgcca tgatgtcagc gctcacatct cgattccgta atcttcaata tcaggagcac 61 caccttgtcc atatgggagc aaacattctc agccggcggc aatggtgcct gtgtctgctg 121 atcatcatgt cgacgctttg cagtgccgtg actgtgacct caggcacgtc tgggaacagt 181 cgccgtcgat cgggaggttc aggagcggtg tcctctttgg aggtgactgg ggagaaggcc 241 tttcccgatc aactggctat ggcagctagc cgtaggggct ccgacgatcg tggttactcc 301 aggcggggat cggttacaca aagcagatta aaggaggcgc ccagcaaaga ttacagcttt 361 ggccaggtgg aattaaatct cgttcgccca gagcacgaat cgcatccaaa gcagaccgca 421 gaatccggat ccggagcgta tgtcaaccta gaagactcta aatcggcagc cgagtatgtg 481 gccaatgcca tcaagttggc ctacaaacag ccaccgactc aactgcgagg tcaaagccaa 541 gttcagaacc ctagcaacaa ccacatccag gcgcaaaagg aacagcaacc taccacccag 601 agaagttacc aggaacagag aagggatagg gagatcctgg agatgcaatt gcagaaggaa 661 ctgcatcagc aggccctgct cctgtcctca ggaccctcgt cgccatcctc gtctggatcg 721 tcgtcctcct cttctccgcc gtcgcccgcc ctagcgcctg cgccagtcta cgaaaaggaa 781 cccgtgaccc ggagctatga actctacgaa cacgcaaccg aggacgagtc ccatgtccag 841 gcccaagagc aagacatcga acgccactat cgtcccaagt acagcaataa ctacaacaac 901 atctacgccc cctatcaacc gccgcaaatt tacagaaatc tcgaggccga ggccgaggaa 961 aaagtcaggg tctctgcctc cacggaaatt cccaaatcgg agataatgaa acagattgaa 1021 aagtccgtga tcaagtacat gaaggaacta gaggccgaag gtaaaatcat aagtacgccc 1081 caagagacgg ccacgcctcc tccaccacca ccgcctccgc cgattaccaa gacctactac 1141 aagtcgcaga cgctctcatc tggtctccat tccggttcca ttccctcgtc gcactcgcat 1201 tcacactcgg aggaaaagcg ttacagcagc agtacagtga ggcccaagta tacggtccca 1261 ccaacgacaa aacaacaaca gttgcatcac caccagcagc aggtgctcca cccacagcac 1321 cacagccacc aaatagccgg aaaactgagg ggctcttcat tggcaataac gaattcaaag 1381 cccattcagc actttcagtc cgaaacggaa acggcatatc aggcccccga tttgcccgtc 1441 gacgaactga gtccgaatgt ggagtttatt tacaaaatca agacccgagc tcccctgcaa 1501 acggccacag tgaagacggt ttcgaagccc tacactttgc ctctgaaaag tgccgagcac 1561 tttgaccaca gtgcggccct caagaacatc gaagaattcg atctatccca cgtagttccc 1621 actccagatc gagtggaacg ggagcgggaa agggaaaggg aaagggagcg tgattctcgg 1681 gaagatcagg agaggcttac aaactctggc aagcagcaca agttgtattt caattcggaa 1741 atctatcatg acatcaatgc cttgccctac aaaagtaaag aggcagctct gcaggaatat 1801 cgccacaagc tcaaggcttc cgggtcatcc ggggaactgc atccggacta caaaggctac 1861 tcctcatccg gttactttgc cgagccggaa gcagagactg agaatgaatc aaaactaatc 1921 cttaacgaag aaggctatcc ctatcattat gtgctgaaga aggaaaccct actagatgat 1981 catgagccct ggttgtccca cgcgcacggc cacgcccacc agcacaccca tggccacgcc 2041 cactcgcaca gcaacagcaa caagcacccg agtcttgaat acgacagcta cagtccgaag 2101 ttcaacaaca atcccgaggg ctacggctat cagcacacgt acaaggtcag aggtcaacca 2161 gcaggcggtg ccgggtcggg gggcgtggct ggcataggca gtaacacggg gaccggagct 2221 ggaaagcgcg gcaagcgggg gggaggcggt catcccagac aagaggcgat taagaagcaa 2281 ctgcgctcat cggaggtcaa ggacttggaa gccagtttgg ctctgaggcc accgcccaaa 2341 tagtaaaccc catccctcga ttaatcaatc gaataagccg caaaactcca ccaccaccct 2401 catagcttat tttatgccag aatttcgagc atgcttcatt gtatatgcta ttgtcttttt 2461 tttgtagaat ctaagtgtaa gtacgattat ttattgtatg gccaccaact gctgaagtgg 2521 tagccaacta aaacagacga taacaaatta cgccaataaa caaattaatg aaataactt