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LOCUS NM_079921 3280 bp mRNA linear INV 26-DEC-2023 mRNA. ACCESSION NM_079921 VERSION NM_079921.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3280) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3280) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3280) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3280) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3280) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3280) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3280) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3280) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3280) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3280) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3280) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3280) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3280) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3280) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3280) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3280) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3280) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3280) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3280) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3280) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3280) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3280) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3280) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Dec 17, 2009 this sequence version replaced NM_079921.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3280 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3280 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="small bristles" /map="9F4-9F5" /db_xref="FLYBASE:FBgn0003321" /db_xref="GeneID:43944" CDS 505..2523 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="CG1664 gene product from transcript CG1664-RA; CG1664-PA; sbr-PA; locus 1; nuclear export factor 1; shorter-bristles; Nxf1" /codon_start=1 /product="small bristles, isoform A" /protein_id="NP_524660.1" /db_xref="FLYBASE:FBpp0073267" /db_xref="GeneID:43944" /db_xref="FLYBASE:FBgn0003321" /translation="MPKRGGGSSQRYNNNVGNGGGRYNAPEDFDDFDVEDRQRRKDRN KRRVSFKPSQCLHNKKDIKLRPEDLRRWDEDDDMSDMTTAVKDRPTSRRRGSPIPRGK FGKLMPNSFGWYQVTLQNAQIYEKETLLSALLAAMSPHVFIPQYWRVERNCVIFFTDD YEAAERIQHLGKNGHLPDGYRLMPRVRSGIPLVAIDDAFKEKMKVTMAKRYNIQTKAL DLSRFHADPDLKQVFCPLFRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVE KRLPNLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNPCRSRYKDSQQFISEVRRKF PKLVKLDGETLEPQITFDLSEQGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDSGNR QALLDAYHEKAMLSISMPSASQAGRLNSFWKFNRNLRRLLNGEENRTRNLKYGRLACV STLDEWPKTQHDRRTFTVDLTIYNTSMMVFTVTGLFKELNDETNNPASMELYDVRHFA RTYVVVPQNNGFCIRNETIFITNATHEQVREFKRSQHQPAPGAMPSTSSAVTSPQAGA AAGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAVAPGAQDESTKMQMI EAMSAQSQMNVIWSRKCLEETNWDFNHAAFVFEKLFKENKIPPEAFMK" misc_feature 841..1077 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="Tap, RNA-binding; Region: Tap-RNA_bind; pfam09162" /db_xref="CDD:462696" misc_feature 1147..1269 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275382" misc_feature <1258..>1449 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 1270..1347 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275382" misc_feature 1348..1419 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275382" misc_feature 1420..1512 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275382" misc_feature 1618..2097 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many...; Region: NTF2; cd00780" /db_xref="CDD:238403" misc_feature order(1702..1704,1720..1722,1834..1836,1909..1911, 1915..1920,1945..1947,2044..2046,2074..2082,2086..2088, 2092..2094) /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="TAP/p15 interaction [active]" /db_xref="CDD:238403" misc_feature order(1714..1716,1720..1725,1900..1905,1909..1911, 1915..1920,1939..1941,1951..1959,1969..1971,1975..1977, 2011..2019,2026..2028,2044..2046,2074..2082,2086..2097) /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238403" misc_feature order(1723..1728,1870..1872,1879..1881,1954..1956, 1960..1962,1966..1971,1975..1977,2017..2019,2083..2085, 2089..2091,2095..2097) /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="RanGDP-NTF2 interaction [active]" /db_xref="CDD:238403" misc_feature <2146..>2343 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="flagellar hook-associated protein FlgK; Validated; Region: flgK; PRK06945" /db_xref="CDD:235895" misc_feature 2329..2517 /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="C-terminal domain of vertebrate Tap protein; Region: TAP_C; smart00804" /db_xref="CDD:197882" misc_feature order(2401..2403,2413..2415,2422..2427,2431..2442, 2455..2457,2467..2469,2479..2481,2494..2496,2500..2502) /gene="sbr" /locus_tag="Dmel_CG1664" /gene_synonym="CG1664; CG17335; CT4634; Dm nxf1; Dmel\CG1664; DmNXF1; DNXF-1; dNxf1; dNXF1; dTap; l(1)9Fd; l(1)G1; l(1)ts; l(1)ts403; nfx1; NFX1; nxf1; Nxf1; NXF1; NXF1-p15; PABPr; Sbr; SBR; sbt" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270527" ORIGIN 1 gatagacctg tcagaaatta agaaaacaat atcaacatca agcgaatata cttcgctcgc 61 tacatatttc tagttagttt tcgtaacttt ttcgctttgg tggcaattaa atcaaatttc 121 ctcgaagaat aacttgtaaa aaggtcgcaa acatccgtcc agtttctgcc aaccatcggc 181 cactggctat cgaaagaaga tcgctagtga attaaatttc acaaaattgc gttgtacttt 241 ggccgtggaa atttgccaaa aaacagcagc tactttgctg ctatattagc aaataggttc 301 aggaagtcga gaaaaatttt tccagaagtt ggcagcagtt tgtgtgaatg caaaaaatac 361 atcgcacata gttttttgcc ctcaagacag ttttctcagt aataacaaca gcacccacac 421 aaacacacaa caccactcag ctaaaaacgt gctgaaattc gcatatcttt ttgttgcata 481 cgtttttgag tgaatattag taagatgccc aaacgcggcg gtggcagtag ccagcggtac 541 aacaacaacg ttggaaatgg cggcggacgt tacaacgctc ccgaggattt cgatgatttt 601 gatgtggagg atcgccagcg acgcaaggat cgaaacaagc ggcgcgtcag ctttaagccc 661 tcccaatgtc tacataacaa aaaggacatc aagctgcgac ccgaagattt gcgtcgatgg 721 gacgaggatg atgacatgag cgacatgacc acggccgtta aggatagacc cacctcccga 781 cgtcggggat cgcccattcc gcgcggcaag ttcggcaaac tgatgcccaa cagctttggc 841 tggtaccaag tcacgttaca aaacgcccag atatacgaaa aggaaacact cttgagtgct 901 ctattggcag cgatgtcgcc acatgtcttt attcctcaat attggcgagt ggagcgaaac 961 tgcgtaatct tctttacgga cgactacgag gcagccgaac gcattcaaca tctgggcaag 1021 aatggccatc ttccagatgg ctatcgtctg atgccacgag tacgcagcgg tataccacta 1081 gtggccatcg acgatgcctt caaggagaag atgaaggtca caatggccaa gcgttacaat 1141 attcaaacca aggcgctgga tctttcccgt tttcatgcag atccggatct taagcaagtt 1201 ttctgcccac tctttcgtca gaatgtgatg ggcgctgcca ttgacattat gtgcgacaat 1261 atacccgatt tggaggcact taacctgaat gacaactcca ttagcagcat ggaggcgttt 1321 aagggtgtgg agaaacgctt accgaacctc aagattctct atttggggga taacaagata 1381 ccatctttgg cccaccttgt agtgcttcgc aatctgtcca tcttggaact cgttttaaag 1441 aacaatccct gccgttcccg ctacaaggat tcccagcagt ttatcagcga agtacgtcgc 1501 aagtttccca aactggttaa gttggacgga gagaccctgg agccgcaaat cacatttgat 1561 ctatccgagc agggacgtct tctcgaaacg aaggcatcct atctgtgcga cgtcgctggt 1621 gccgaggtgg tgcgccagtt cctggaccag tacttccgca tatttgactc gggcaatcgg 1681 caagctctgc tagatgccta ccatgagaaa gcgatgctct ccatatcaat gccttcggcc 1741 agtcaggcgg gcagattgaa cagtttctgg aagttcaatc gcaatctccg gcgcttgtta 1801 aacggcgaag agaatcgcac ccgaaacttg aagtacggac gcctggcatg tgtttccaca 1861 ttggatgaat ggccaaaaac gcagcacgac cgacgcacct tcaccgtcga cctgaccatc 1921 tacaatactt caatgatggt tttcaccgtg acgggattat tcaaagagct gaacgacgag 1981 accaacaatc ccgcctccat ggaattatat gacgttcgcc actttgcccg cacctacgtg 2041 gtggtgccac agaataatgg cttttgtatc cgcaacgaga cgatcttcat cacaaacgct 2101 acgcacgagc aggtgcgaga gttcaagcga tcgcagcacc agcctgctcc cggagctatg 2161 ccctccactt ccagtgcagt gaccagtcct caggccgggg cagcggcggg tctgcagggt 2221 cgtctgaatg cgttgggcgt ggccactgga ccggtggcta tactatcagg agatccgttg 2281 gcggccaccg caccggttaa cagcggcagt gccgccatat cgacaacagc agtggcacct 2341 ggcgcccagg atgagagcac taaaatgcaa atgattgaag ccatgagcgc ccaaagccaa 2401 atgaatgtga tctggagtcg gaaatgcctg gaggaaacga attgggactt taaccatgcc 2461 gcctttgtgt tcgagaaact attcaaggaa aacaaaatac cgcctgaggc ttttatgaag 2521 taaatcgcat aggagtttcc gtaggacaga gccgcgtgcc acatccacat aatcgaatgc 2581 tgtttttttt tttttggttt tgtaattaaa ttttaaaatt attagagaaa cctctatata 2641 ataataataa ttaatattat taagctgcga agttgtgtgc acattcgggc agtagcaatt 2701 attatcccag cactgcgggc aatgtgcatc aacgatcaca gttcttcgat agattagttt 2761 agctctcttt aagttccgtc cgcagatccg ctggtctaca ttgaggccag gacgagtctg 2821 cgaacggtag tccctttaga gttaaagttg ttttagattc ctaagccaaa caccttcaaa 2881 cacacacaac acgacaacac tattaaacgt aatgcaacaa tgttgtcgaa tcgaaagaaa 2941 cccaattttt attttaatat atacgacgat accgaaacca aggcgatggt cgaaaagcat 3001 ggatcgcgcc aataattcta tattccccgc tttcccagat cctcgactcg ccttacattt 3061 tgtatacaaa taccatagaa taaaaagaaa cattttgacc actgtaaaaa ttttgtaacg 3121 actcggaaac caaaattacc tttatttctt aatagaaaaa aattattcga tttacaatac 3181 acgcttagcc gtaaattcaa ttgaatttaa gtgtaagata tataaaaatt atatacatta 3241 agacaaaagt gtagattcat aaataaattt ttcagaatag