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LOCUS NM_078528 2571 bp mRNA linear INV 26-DEC-2023 subunit (ND-75), transcript variant A, mRNA. ACCESSION NM_078528 VERSION NM_078528.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2571) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2571) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2571) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2571) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2571) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2571) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2571) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2571) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2571) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2571) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2571) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2571) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2571) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2571) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2571) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2571) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2571) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2571) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2571) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2571) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2571) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2571) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2571) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_078528.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2571 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2571 /gene="ND-75" /locus_tag="Dmel_CG2286" /gene_synonym="CG2286; Dmel\CG2286; dNDUFS1; ND75; NDUFS1; NDUS1; NUAM" /note="NADH dehydrogenase (ubiquinone) 75 kDa subunit" /map="7E1-7E1" /db_xref="FLYBASE:FBgn0017566" /db_xref="GeneID:31762" CDS 97..2292 /gene="ND-75" /locus_tag="Dmel_CG2286" /gene_synonym="CG2286; Dmel\CG2286; dNDUFS1; ND75; NDUFS1; NDUS1; NUAM" /EC_number="1.-.-.-" /EC_number="1.6.-.-" /note="CG2286 gene product from transcript CG2286-RA; CG2286-PA; ND-75-PA; NADH ubiquinone oxidoreductase 75 kDa; NADH:ubiquinone reductase 75-kD subunit precursor; NADH:ubiquinone oxidoreductase 75 kDa subunit; FBpp0071128; NADH:ubiquinone reductase 75kD subunit precursor; NADH:ubiquinone reductase 75 kDa subunit; NADH-ubiquinone oxidoreductase 75 kDa subunit" /codon_start=1 /product="NADH dehydrogenase (ubiquinone) 75 kDa subunit, isoform A" /protein_id="NP_511083.1" /db_xref="FLYBASE:FBpp0071128" /db_xref="GeneID:31762" /db_xref="FLYBASE:FBgn0017566" /translation="MIRAPLVKALGALGSPTHQMASRAVRTSAMVAQTPAKAPEKIEV FVDDIPVQVVPGTTVLQAAAQIGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAAC AMPVMKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDR SRFTDINYTGKRAVEDKDIGPLVKTIMTRCIHCTRCVRFASEIAGVDDLGTTGRGNDM QIGTYVEKLFLTELSGNVIDLCPVGALTNKPYSFVARPWEIRKVSSIDVLDAVGSNIV VSTRTNEVLRILPRENEDVNEEWLADKSRFACDGLKRQRLVAPMVRMPNGELQAVEWE GALIAVAKAIKAAGGQIAGISGQLADLEAQVALKDLLNRLGSEVVATEQGFIAGGTDN RANYLLNSTIAGLEEADAVLLVGTNPRYEAPLVNTRLRKAYVHNELQIASIGPKIDLS YDHENLGADAALVKDVCSGAHAFSKVLEGAKKPAIIIGADLLERADGAAIHATVAEYC KKLKKPNWNPFNVLQTNAAQVGALDVGYKAGAQTAVKAQPKVLFLLNADAGKVTREQL PKDCFVVYIGSHGDNGASIADAVLPGAAYTEKQGIYVNTEGRPQQTLPGVSPPGMARE DWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTRLGQLEPAGDAGAAGTISKSIG GGAIDIKLKELRDYFMTDAISRASPTMAKCISAVNKQQRENEAKQSVAI" misc_feature 226..1992 /gene="ND-75" /locus_tag="Dmel_CG2286" /gene_synonym="CG2286; Dmel\CG2286; dNDUFS1; ND75; NDUFS1; NDUS1; NUAM" /note="NADH-quinone oxidoreductase, chain G; Region: NuoG; TIGR01973" /db_xref="CDD:273904" misc_feature 2107..2232 /gene="ND-75" /locus_tag="Dmel_CG2286" /gene_synonym="CG2286; Dmel\CG2286; dNDUFS1; ND75; NDUFS1; NDUS1; NUAM" /note="NADH-ubiquinone oxidoreductase subunit G, C-terminal; Region: NADH_dhqG_C; pfam09326" /db_xref="CDD:462757" ORIGIN 1 tggcaacgcg gtcggtctgt caaagcaaaa tccgataaaa aaaaagttgt ctccacatta 61 aaagatcaca ggaatatttt ccagcatttc gaaaatatga tacgggcacc gctagtcaag 121 gcgctgggcg ctctgggctc gcccacacat cagatggcca gccgggcggt gcgaaccagc 181 gccatggtgg cccagacacc ggcgaaagcg cccgagaaga tcgaggtctt tgtggatgac 241 attcccgtgc aggtggtacc cggcaccact gtcctccagg ctgctgctca gatcggcgtg 301 gagataccca gattctgcta ccacgaacgt cttgcggtgg ccggcaactg caggatgtgc 361 ctcgtcgagg tggagaagag tcccaagcca gtggccgcct gcgctatgcc cgtgatgaag 421 ggctggcgca tcaagaccaa ctcggatttg acccgcaagg cgcgcgaggg cgtcatggag 481 ttcctgctga tgaaccatcc gctggattgc cccatctgcg atcagggcgg cgagtgcgat 541 ctgcaggatc aggccatggc cttcggttcc gatcgatccc gcttcacgga cattaactac 601 acgggcaagc gcgctgtcga ggacaaggac atcggaccgc tagtcaagac catcatgaca 661 cgctgcatcc actgcacccg ctgtgtgcgt ttcgcctccg agattgccgg cgttgatgac 721 ctgggcacca ctggccgtgg caacgacatg cagatcggca cctacgtgga gaagctcttc 781 cttaccgaac tgtccggcaa cgtgatcgac ctgtgccccg tgggagcgct gaccaacaag 841 ccctacagtt ttgtggcccg tccctgggag atccgtaagg tgagcagcat cgatgtgctg 901 gacgccgtcg gcagcaacat tgtcgtcagc acccgcacca atgaggtgct gcgcatcctg 961 ccccgtgaga acgaggacgt caacgaggaa tggcttgctg acaaatcgcg cttcgcctgc 1021 gacggtctga agcgccagcg cctggtggct cccatggtgc gcatgcccaa cggcgaacta 1081 caggccgtag agtgggaggg tgccctcatc gccgtggcca aggccattaa ggcagccggt 1141 ggacagattg ccggtatttc tggccaactt gccgacctgg aggctcaggt ggccctgaag 1201 gatctgctga accgtctggg cagcgaagtg gtcgccactg aacaaggatt tattgccgga 1261 ggcaccgaca accgtgctaa ttacctcttg aacagcacca ttgccggttt ggaggaggcc 1321 gacgccgttc tcctggtggg caccaatccc cgttacgagg ctccattggt caacacccgt 1381 ttgcgcaagg cctatgtgca caacgaactg cagattgcct cgattggacc caagatcgat 1441 ctgtcctacg accacgagaa ccttggcgcc gatgccgctt tagtcaagga cgtgtgctcc 1501 ggagctcatg ccttctccaa ggtcttggag ggtgccaaga agccggccat cattattgga 1561 gccgatttgt tggagcgtgc cgatggtgcc gccattcacg ccaccgttgc cgagtactgc 1621 aagaagctga agaagccgaa ctggaacccc ttcaatgtgc tgcagaccaa cgccgcccag 1681 gtgggcgccc tcgatgtggg ctacaaggcc ggtgcacaga ccgctgtgaa ggctcagccc 1741 aaggtgctgt tcctgttgaa cgccgacgct ggcaaggtga ctcgcgagca gctgcccaag 1801 gactgcttcg tggtgtacat tggatcgcat ggtgacaacg gcgcctccat tgccgatgcc 1861 gttctgcctg gtgccgccta cacagagaag cagggcatct acgtgaacac ggagggcagg 1921 ccgcagcaga cgctgcctgg tgtttcgcca ccgggtatgg ctcgcgagga ctggaagatc 1981 ctgcgcgctc tgtccgaggt ggtgggcaag ccgctgccgt acgacaacct ggacgagctg 2041 cgcaaccgtc tggaggatgt ggcgccacat ctaacgcgcc tgggccaatt ggagccagcc 2101 ggcgatgccg gagcagcggg cactattagc aaatccatcg gcggtggcgc catcgatatt 2161 aagctaaagg agctgcgcga ctacttcatg accgacgcca tttcgcgcgc ctcgcccacc 2221 atggccaagt gcatatcggc ggtcaacaag cagcagcggg agaacgaggc caagcagagt 2281 gtggctatct aggcgcccac tctcgcgtct gatctaaact aataactaat taatgttttt 2341 ttttaaactc tgcccttcgt cctttcgcgc cgcactcgcc cactaattaa cggacacaaa 2401 gacaccagga cgagccgcgg gaagagccag cgcagtagcg ggatgaggag cacgatcggc 2461 ggctgcagag gcgccagcgc tgcgtcagtt gtaaatgaaa aagtcttacg ttgttcaaaa 2521 caaaggagtt attcaatacg aaaaatagga aaaccaaaat aaaaatgtaa t