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LOCUS NM_078500 2458 bp mRNA linear INV 26-DEC-2023 2 (Mipp2), mRNA. ACCESSION NM_078500 VERSION NM_078500.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2458) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2458) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2458) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2458) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2458) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2458) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2458) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2458) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2458) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2458) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2458) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2458) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2458) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2458) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2458) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2458) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2458) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2458) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2458) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2458) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2458) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2458) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2458) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_078500.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2458 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2458 /gene="Mipp2" /locus_tag="Dmel_CG4317" /gene_synonym="CG4317; Dmel\CG4317; l(1)G0050; l(1)G0303; mipp2" /note="Multiple inositol polyphosphate phosphatase 2" /map="5D4-5D4" /db_xref="FLYBASE:FBgn0026060" /db_xref="GeneID:31544" CDS 178..1539 /gene="Mipp2" /locus_tag="Dmel_CG4317" /gene_synonym="CG4317; Dmel\CG4317; l(1)G0050; l(1)G0303; mipp2" /EC_number="3.1.3.-" /EC_number="3.1.3.2" /EC_number="3.1.3.80" /note="CG4317 gene product from transcript CG4317-RA; CG4317-PA; Mipp2-PA" /codon_start=1 /product="multiple inositol polyphosphate phosphatase 2" /protein_id="NP_511055.1" /db_xref="FLYBASE:FBpp0070849" /db_xref="GeneID:31544" /db_xref="FLYBASE:FBgn0026060" /translation="MLSQFYCLFLLLLHFFVGVTLSEEGECRRLNRADIEGRLSTKTP YRAIANYDETPPKYAGCHPTRIWTIIRHGTRNPSESVILQAQNRLSEIKKRILDQTKP PICTAELEKLRQWHWMHLNATEDEKLLVAEGEDELIELAERMQRRFPDLLPELYNPEW YYFKYTATQRTLKSAESFATGLFGRHRIHTVRYPPPLHEDPVLRFYKGCGKWKTDVDK NPETLVNARRFLAEPQMQSAVEQVRSSTRLPDLQPEDVQLMYTVCAFETAWHRPRHDS GSKSSYESVWCNFFDVAALEALEFFEDLEYYWNDGYGYELTHRIACPAIADMFAAISS SEETRQRRANATLYFTHSGTLLKLLAHLGLARDNKPLTHKHFASERLWRTSQIDAFAT NLAFLRYDCDKGNPQVLVLHQERVVRLPGCPQDKDLCPLATLRRIYANSVDHCDREKM CRV" misc_feature 379..1230 /gene="Mipp2" /locus_tag="Dmel_CG4317" /gene_synonym="CG4317; Dmel\CG4317; l(1)G0050; l(1)G0303; mipp2" /note="Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Region: HP; cl11399" /db_xref="CDD:472174" ORIGIN 1 ctgatagcct tgccaccttg cgcgactagc acacttgtca atttgttttt ctttcgtgtt 61 tattatttcc tagatttctt ttgagctggc atttcgttct gtttttcacg ttttaacccc 121 gtttttcggt aaacctcgtt tctaatctcg tgacaagttt ttccaccgcc cggaaagatg 181 ctaagccaat tttactgctt gtttttgttg ctcctccact tcttcgtggg cgtgacgttg 241 tctgaagagg gggagtgccg ccgccttaat cgcgcagata tcgagggcag actgtccaca 301 aagacgccct acagagcgat cgcaaattat gacgaaacgc caccgaaata cgccggctgc 361 catccgacgc gaatttggac catcatccga cacggaacta gaaatcctag cgaatccgtt 421 atccttcagg cgcaaaatcg actatcagag ataaagaaac gcattctgga tcagacgaag 481 ccgccgatct gcaccgctga attggaaaag ctgcgccaat ggcactggat gcatctgaat 541 gccactgaag atgagaaatt actggtggcc gagggtgagg atgagctgat tgagctggcg 601 gaacggatgc agcggcgatt tccggatcta cttccggagt tgtacaatcc ggagtggtac 661 tacttcaagt atactgcgac ccagagaacg ctgaaaagtg cggaaagctt cgctacgggt 721 ttgttcggcc gtcatcgcat ccatactgta cgatatccgc cgcctttgca cgaggatcct 781 gttttgcggt tctataaggg ctgtggaaag tggaaaactg acgtcgataa gaatcccgaa 841 accttggtca acgcacgcag gttccttgca gagccgcaga tgcagtcagc agtggagcag 901 gtacggagca gcacccggct accagatctt cagccggagg acgttcagct tatgtacacg 961 gtgtgcgctt tcgagacggc ctggcatcgc ccacgtcacg actccggctc gaaatcttca 1021 tacgaatccg tgtggtgtaa cttctttgat gtggccgcct tggaggcgct ggaattcttc 1081 gaggatcttg agtactattg gaacgatggc tacggctacg aactgactca tcgcattgcc 1141 tgtccagcaa tcgcagatat gtttgcggcc attagttcct ctgaggagac acggcagcga 1201 cgggccaacg ccacgctgta cttcacgcac tcgggtacgc ttctcaaatt gctggcccac 1261 ctgggattgg cccgggacaa taagccgctg acgcacaaac actttgccag cgagcgtctt 1321 tggcgcacaa gccagattga cgcgttcgcg accaacttgg ccttcctacg ttacgactgc 1381 gacaagggga atccgcaagt cctggtgctg caccaggagc gagtggtgcg cctgcccggc 1441 tgcccgcagg acaaggatct ctgtccgctg gccacgctgc gtcggattta cgccaatagc 1501 gtggaccact gcgaccgcga gaagatgtgc cgagtgtagg tcggctaagc atggagcaca 1561 ttcggaatgg agctgctgga tggattgttt gattgtattt tgtggctttg ctgccctgcc 1621 actaattgac ctcgggaaaa gggattcgtc ggaaagttta ggatacaact gatatagaga 1681 taatgttagg aatggaaaag attcgaagga actggagttc aacaatgatc agattaggat 1741 taggactagt tttgtaagtg atgagcggcg gagagcggaa atttatgtgt tgaccaagtg 1801 gcgagtcgaa ttctgtgtgt tttgtatgcc ttattaatca atgtggacca tccactccag 1861 cactaaagaa cttcgaacag gagcgcatga tatagagcga gacggagatg gagagtggaa 1921 agagaaaggg atggatggct ttatagactt tagtctataa ataccctgga aggcgctcga 1981 aatgctgtta agatttaaac aatatctctt gggttacatt tcttttgtta ttcggttaat 2041 catgctatac gcatagccta atccttatcc caacgccaaa tggcaacgca tactgtacat 2101 atataaatac ttgatgtata agataattaa ctatagttat atttatccaa cacaacacac 2161 acatatatac ataaacacaa tcgtagttgt agtatgcctc tattctaatc gatccttcgc 2221 ccccaaaagg aaacgttcgt tgtgctaact tgtgttgtat acctataaac gagacagaat 2281 atatatattt gataaggcaa ggatatggaa caaatgttgg gttcctacat aactttgtac 2341 ataacactta cgaccttaat tacttttgtc taattttgtt tgtcctgtcg gaaagcccaa 2401 caacaaaacc aaccgcagta acaaccaata aactaacgaa atttctagtt taaagctt